DEGS2 ORF clone pF1KE2762

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Flexi ORF Clone pF1KE2762

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Clone info.

Species

human

Clone Name

pF1KE2762 Sequence (with vector) Restriction Map

Product ID

FXC25296

HaloTag Clone PID

ORF Sequence

DNA sequence (969 bp)
Protein sequence (323 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE2762

Symbol

DEGS2

Alias : C14orf66, DES2, FADS8

Description

delta 4-desaturase, sphingolipid 2

Original Clone ID

oc01746

Features of the cloned ORF sequence

Description

Length: 969 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 323 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9956.1 5.1e-166 99.7 DEGS2 CCDS1540.1 5.8e-114 65.0 DEGS1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013866 6 42 PF08557 Sphingolipid delta4-desaturase IPR005804 66 286 PF00487 Fatty acid desaturase
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 50 LVLVQMLTCWLVRGLAWRWLLFW 72 PRIMARY 23 2 160 LLWLVLQPFFYSLRPLCVHPKAV 182 SECONDARY 23 3 196 ADLAIFALWGLKPVVYLLASSFL 218 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_996801 323 610862 99.7 100.0 XP_006720106 287 610862 99.7 88.9 NP_003667 323 615843,618404 65.0 97.2 XP_016858137 287 615843,618404 63.7 86.1 NP_001308471 287 615843,618404 63.7 86.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE2762 Download

>KIEE2762  969 bp
ATGGGCAACAGCGCGAGCCGCAGCGACTTCGAGTGGGTCTACACCGACCAGCCGCACACG
CAGCGGCGCAAGGAGATACTGGCCAAGTACCCGGCCATCAAGGCCCTGATGCGGCCAGAC
CCGCGCCTCAAGTGGGCGGTGCTGGTGCTGGTGCTGGTGCAGATGCTGACCTGCTGGCTG
GTGCGCGGGCTGGCCTGGCGCTGGCTGCTGTTCTGGGCCTACGCCTTTGGTGGCTGCGTG
AACCACTCGCTGACGCTGGCCATCCACGACATCTCGCACAACGCGGCCTTCGGCACGGGC
CGTGCGGCACGCAACCGCTGGCTGGCCGTGTTCGCCAACCTGCCCGTGGGTGTGCCCTAC
GCCGCCTCCTTCAAGAAGTACCACGTGGACCACCACCGCTACCTGGGCGGCGACGGGCTG
GACGTGGACGTGCCCACGCGTCTGGAGGGCTGGTTCTTCTGCACGCCCGCCCGCAAGCTG
CTCTGGCTGGTGCTGCAGCCCTTCTTCTACTCACTACGGCCGCTCTGCGTCCACCCCAAG
GCCGTGACCCGCATGGAGGTGCTCAACACGCTGGTGCAGCTGGCGGCCGACCTGGCCATC
TTTGCCCTTTGGGGGCTCAAGCCCGTGGTCTACCTGCTGGCCAGCTCCTTCCTGGGCCTG
GGCCTGCACCCCATCTCGGGCCACTTCGTGGCCGAGCACTACATGTTCCTCAAGGGCCAC
GAGACCTACTCCTACTATGGGCCTCTCAACTGGATCACCTTCAATGTGGGCTACCACGTG
GAGCACCACGACTTCCCCAGCATCCCGGGCTACAACCTGCCGCTGGTGCGGAAGATCGCG
CCCGAGTACTACGACCACCTGCCGCAGCACCACTCCTGGGTGAAGGTGCTCTGGGATTTT
GTGTTTGAGGACTCCCTGGGGCCCTATGCCAGGGTGAAGCGGGTGTACAGGCTGGCAAAA
GATGGTCTG

ORF Protein

Cloned ORF protein sequence for pF1KE2762 Download

>KIEE2762  323 aa
MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLTCWL
VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY
AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK
AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH
ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF
VFEDSLGPYARVKRVYRLAKDGL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE2762 Download

>pF1KE2762  4082 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCAACAGC
GCGAGCCGCAGCGACTTCGAGTGGGTCTACACCGACCAGCCGCACACGCAGCGGCGCAAG
GAGATACTGGCCAAGTACCCGGCCATCAAGGCCCTGATGCGGCCAGACCCGCGCCTCAAG
TGGGCGGTGCTGGTGCTGGTGCTGGTGCAGATGCTGACCTGCTGGCTGGTGCGCGGGCTG
GCCTGGCGCTGGCTGCTGTTCTGGGCCTACGCCTTTGGTGGCTGCGTGAACCACTCGCTG
ACGCTGGCCATCCACGACATCTCGCACAACGCGGCCTTCGGCACGGGCCGTGCGGCACGC
AACCGCTGGCTGGCCGTGTTCGCCAACCTGCCCGTGGGTGTGCCCTACGCCGCCTCCTTC
AAGAAGTACCACGTGGACCACCACCGCTACCTGGGCGGCGACGGGCTGGACGTGGACGTG
CCCACGCGTCTGGAGGGCTGGTTCTTCTGCACGCCCGCCCGCAAGCTGCTCTGGCTGGTG
CTGCAGCCCTTCTTCTACTCACTACGGCCGCTCTGCGTCCACCCCAAGGCCGTGACCCGC
ATGGAGGTGCTCAACACGCTGGTGCAGCTGGCGGCCGACCTGGCCATCTTTGCCCTTTGG
GGGCTCAAGCCCGTGGTCTACCTGCTGGCCAGCTCCTTCCTGGGCCTGGGCCTGCACCCC
ATCTCGGGCCACTTCGTGGCCGAGCACTACATGTTCCTCAAGGGCCACGAGACCTACTCC
TACTATGGGCCTCTCAACTGGATCACCTTCAATGTGGGCTACCACGTGGAGCACCACGAC
TTCCCCAGCATCCCGGGCTACAACCTGCCGCTGGTGCGGAAGATCGCGCCCGAGTACTAC
GACCACCTGCCGCAGCACCACTCCTGGGTGAAGGTGCTCTGGGATTTTGTGTTTGAGGAC
TCCCTGGGGCCCTATGCCAGGGTGAAGCGGGTGTACAGGCTGGCAAAAGATGGTCTGGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT