OR1L6 ORF clone pF1KE0893

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Flexi ORF Clone pF1KE0893

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Clone info.

Species

human

Clone Name

pF1KE0893 Sequence (with vector) Restriction Map

Product ID

FXC11345

HaloTag Clone PID

FHC11345

ORF Sequence

DNA sequence (1041 bp)
Protein sequence (347 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529307]

Gene

KIEE0893

Symbol

OR1L6

Alias : HG16, OR1K1, OR1L7, OR9-30

Description

olfactory receptor, family 1, subfamily L, member 6

Original Clone ID

cp01293

Features of the cloned ORF sequence

Description

Length: 1041 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 347 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35130.2 1.1e-92 98.1 OR1L6 CCDS35129.1 4.5e-89 94.8 OR1L4 CCDS35127.2 3.9e-63 68.0 OR1L1 CCDS35128.1 5.1e-60 66.9 OR1L3 CCDS35124.1 2.9e-55 60.7 OR1L8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 63 87 PR00237 GPCR IPR000276 96 117 PR00237 GPCR IPR000725 129 140 PR00245 Olfactory receptor IPR000276 141 163 PR00237 GPCR IPR000725 166 178 PR00245 Olfactory receptor IPR000725 213 229 PR00245 Olfactory receptor IPR000276 236 259 PR00237 GPCR IPR000725 273 282 PR00245 Olfactory receptor IPR000276 309 335 PR00237 GPCR IPR000725 320 331 PR00245 Olfactory receptor HMMPfam IPR000276 78 327 PF00001 GPCR ProfileScan IPR017452 78 327 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 8 KLMKEAVLVKLPFTSLPLLLQTL 30 SECONDARY 23 2 55 SSNPKLQKPLFAIFLIMYLLAAV 77 SECONDARY 23 3 98 FFLSNLSFMDICFTTVIVPKMLV 120 SECONDARY 23 4 125 ETKVISYVGCLAQMYFFMAFGN 146 SECONDARY 22 5 148 DSYLLASMAIDRLVAICNPLHY 169 SECONDARY 22 6 171 VVMKPRHCLLMLLGSYSISHLHS 193 SECONDARY 23 7 195 FRVLLMSRLSFCASHIIKHFFCD 217 SECONDARY 23 8 239 ETLAVIVTPFLCTIFSYLQIIVT 261 PRIMARY 23 9 278 CGSHLTAVALFYGSIIYVYFRPL 300 PRIMARY 23 10 309 RVATVMYTVVTPMLNPFIYSLR 330 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520808 322 603232 55.0 89.6 NP_036492 312 603232 55.6 87.0 XP_011520809 312 603232 55.6 87.0 NP_002539 312 164342 52.3 87.6 NP_001005191 312 611538 51.9 88.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0893 Download

>KIEE0893  1041 bp
ATGAGCTATTTTTACAGGCTTAAGCTTATGAAAGAAGCTGTCTTGGTCAAACTGCCCTTT
ACATCTCTCCCACTGCTTCTCCAAACCCTATCCAGGAAGTCCAGAGACATGGAGATAAAG
AACTACAGCAGCAGCACCTCAGGCTTCATCCTCCTGGGCCTCTCTTCCAACCCTAAGCTG
CAGAAACCTCTCTTTGCCATCTTCCTCATCATGTACCTGCTCGCTGCGGTGGGGAATGTG
CTCATCATCCCGGCCATCTACTCTGACCCCAGGCTCCACACCCCTATGTACTTTTTTCTC
AGCAACTTGTCTTTCATGGATATCTGCTTCACAACAGTCATAGTGCCTAAGATGCTGGTG
AATTTTCTATCAGAGACAAAGGTTATCTCCTATGTGGGCTGCCTGGCCCAGATGTACTTC
TTTATGGCATTTGGGAACACTGACAGCTACCTGCTGGCCTCTATGGCCATCGACCGGCTG
GTGGCCATCTGCAACCCCTTACACTATGATGTGGTTATGAAACCACGGCATTGCCTGCTC
ATGCTATTGGGTTCTTACAGCATCTCCCACCTACATTCCCTGTTCCGCGTGCTACTTATG
TCTCGCTTGTCTTTCTGTGCCTCTCACATCATTAAGCACTTTTTCTGTGACACCCAGCCT
GTGCTAAAGCTCTCCTGCTCTGACACATCCTCCAGCCAGATGGTGGTGATGACTGAGACC
TTAGCTGTCATTGTGACCCCCTTCCTGTGTACCATCTTCTCCTACCTGCAAATCATCGTC
ACTGTGCTCAGAATCCCCTCTGCAGCCAGGAAGTGGAAGGCCTTCTCTACCTGTGGCTCC
CACCTCACTGCAGTAGCCCTTTTCTATGGGAGTATTATTTATGTCTATTTTAGGCCCCTG
TCCATGTACTCAGTGGTTAGGGACCGGGTAGCCACAGTTATGTACACAGTAGTGACACCC
ATGCTGAACCCTTTCATCTACAGCCTGAGGAACAAAGATATGAAGAGGGGTTTGAAGAAA
TTACAGGACAGAATTTACCGG

ORF Protein

Cloned ORF protein sequence for pF1KE0893 Download

>KIEE0893  347 aa
MSYFYRLKLMKEAVLVKLPFTSLPLLLQTLSRKSRDMEIKNYSSSTSGFILLGLSSNPKL
QKPLFAIFLIMYLLAAVGNVLIIPAIYSDPRLHTPMYFFLSNLSFMDICFTTVIVPKMLV
NFLSETKVISYVGCLAQMYFFMAFGNTDSYLLASMAIDRLVAICNPLHYDVVMKPRHCLL
MLLGSYSISHLHSLFRVLLMSRLSFCASHIIKHFFCDTQPVLKLSCSDTSSSQMVVMTET
LAVIVTPFLCTIFSYLQIIVTVLRIPSAARKWKAFSTCGSHLTAVALFYGSIIYVYFRPL
SMYSVVRDRVATVMYTVVTPMLNPFIYSLRNKDMKRGLKKLQDRIYR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0893 Download

>pF1KE0893  4154 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCTATTTT
TACAGGCTTAAGCTTATGAAAGAAGCTGTCTTGGTCAAACTGCCCTTTACATCTCTCCCA
CTGCTTCTCCAAACCCTATCCAGGAAGTCCAGAGACATGGAGATAAAGAACTACAGCAGC
AGCACCTCAGGCTTCATCCTCCTGGGCCTCTCTTCCAACCCTAAGCTGCAGAAACCTCTC
TTTGCCATCTTCCTCATCATGTACCTGCTCGCTGCGGTGGGGAATGTGCTCATCATCCCG
GCCATCTACTCTGACCCCAGGCTCCACACCCCTATGTACTTTTTTCTCAGCAACTTGTCT
TTCATGGATATCTGCTTCACAACAGTCATAGTGCCTAAGATGCTGGTGAATTTTCTATCA
GAGACAAAGGTTATCTCCTATGTGGGCTGCCTGGCCCAGATGTACTTCTTTATGGCATTT
GGGAACACTGACAGCTACCTGCTGGCCTCTATGGCCATCGACCGGCTGGTGGCCATCTGC
AACCCCTTACACTATGATGTGGTTATGAAACCACGGCATTGCCTGCTCATGCTATTGGGT
TCTTACAGCATCTCCCACCTACATTCCCTGTTCCGCGTGCTACTTATGTCTCGCTTGTCT
TTCTGTGCCTCTCACATCATTAAGCACTTTTTCTGTGACACCCAGCCTGTGCTAAAGCTC
TCCTGCTCTGACACATCCTCCAGCCAGATGGTGGTGATGACTGAGACCTTAGCTGTCATT
GTGACCCCCTTCCTGTGTACCATCTTCTCCTACCTGCAAATCATCGTCACTGTGCTCAGA
ATCCCCTCTGCAGCCAGGAAGTGGAAGGCCTTCTCTACCTGTGGCTCCCACCTCACTGCA
GTAGCCCTTTTCTATGGGAGTATTATTTATGTCTATTTTAGGCCCCTGTCCATGTACTCA
GTGGTTAGGGACCGGGTAGCCACAGTTATGTACACAGTAGTGACACCCATGCTGAACCCT
TTCATCTACAGCCTGAGGAACAAAGATATGAAGAGGGGTTTGAAGAAATTACAGGACAGA
ATTTACCGGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGC
AGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGC
CACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTT
TTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAG
CTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCT
TGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGC
TTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGA
GCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTA
AACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAA
GAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCG
GCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCT
GATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGAC
CTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACG
ACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTG
CTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAA
GTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCA
TTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTT
GTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCC
AGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGC
TTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTG
GGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTT
GGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAG
CGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAA
TGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATC
CACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAG
GAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCA
TCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCA
GGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGG
ATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAG
GTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGT
TCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACA
CGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGG
CGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATT
TGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATC
CGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCG
CAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTG
GAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTA
GATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGT
GAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTC
TGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGG
GTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGG
TGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGA
TAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCT
GATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAG
TAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGA
TGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAA
AGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC
TGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGT
GGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGA
CGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCAT