ELAVL3 ORF clone pF1KE0620

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Flexi ORF Clone pF1KE0620

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Clone info.

Species

human

Clone Name

pF1KE0620 Sequence (with vector) Restriction Map

Product ID

FXC11205

HaloTag Clone PID

FHC11205

ORF Sequence

DNA sequence (1080 bp)
Protein sequence (360 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI
Because the PmeI site of this clone is affected by EcoKI methylase, we strongly recommend use of EcoKI methylase-free E.coli strain for preparation of this clone.

GenBank Accession

ORF sequence is derived from [AB528883]

Gene

KIEE0620

Symbol

ELAVL3

Alias : HUC, HUCL, PLE21

Description

ELAV like neuron-specific RNA binding protein 3, transcript variant 2

Original Clone ID

cs02120

Features of the cloned ORF sequence

Description

Length: 1080 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 360 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS45978.1 5.6e-106 100.0 ELAVL3 CCDS32912.1 7.7e-105 98.1 ELAVL3 CCDS44138.1 5.4e-87 82.2 ELAVL4 CCDS53315.1 5.5e-87 82.2 ELAVL4 CCDS44140.1 1e-86 81.5 ELAVL4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR002343 39 54 PR00961 Paraneoplastic encephalomyelitis antigen IPR002343 96 111 PR00961 Paraneoplastic encephalomyelitis antigen IPR002343 112 129 PR00961 Paraneoplastic encephalomyelitis antigen IPR002343 130 145 PR00961 Paraneoplastic encephalomyelitis antigen IPR002343 145 157 PR00961 Paraneoplastic encephalomyelitis antigen IPR002343 186 203 PR00961 Paraneoplastic encephalomyelitis antigen HMMPfam IPR000504 41 111 PF00076 RNA recognition motif domain IPR000504 127 190 PF00076 RNA recognition motif domain IPR000504 279 348 PF00076 RNA recognition motif domain HMMSmart IPR003954 39 113 SM00361 RNA recognition motif domain IPR000504 40 113 SM00360 RNA recognition motif domain IPR000504 126 201 SM00360 RNA recognition motif domain IPR003954 278 351 SM00361 RNA recognition motif domain IPR000504 278 351 SM00360 RNA recognition motif domain HMMTigr IPR006548 36 359 TIGR01661 Splicing factor ELAV/HuD ProfileScan IPR000504 39 117 PS50102 RNA recognition motif domain IPR000504 125 205 PS50102 RNA recognition motif domain IPR000504 277 355 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115657 360 603458 100.0 100.0 NP_001411 367 603458 98.1 100.0 XP_011526080 366 603458 97.8 100.0 NP_001138248 366 168360 82.2 99.2 NP_001138249 369 168360 82.2 99.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0620 Download

>KIEE0620  1080 bp
ATGGTCACTCAGATACTGGGGGCCATGGAGTCTCAGGTGGGGGGGGGCCCGGCCGGCCCG
GCCCTGCCCAACGGGCCACTCCTTGGTACAAATGGAGCCACTGACGACAGCAAGACCAAC
CTCATCGTCAACTACCTGCCCCAGAACATGACCCAGGATGAGTTCAAGAGTCTCTTCGGC
AGCATTGGCGACATCGAGTCCTGCAAGTTGGTTCGGGACAAGATCACAGGGCAGAGCCTT
GGCTACGGGTTTGTGAACTATTCTGATCCCAATGATGCAGACAAAGCCATCAACACCCTC
AACGGCCTCAAATTACAGACGAAGACCATCAAGGTGTCCTATGCCAGACCCAGTTCAGCA
TCCATCCGGGATGCTAACCTGTACGTCAGCGGGCTCCCCAAGACCATGAGCCAGAAAGAG
ATGGAGCAGCTCTTCTCCCAGTACGGCCGCATCATCACGTCCCGCATCCTGGTGGACCAG
GTCACAGGTGTCTCTCGGGGTGTGGGATTCATCCGCTTTGACAAGAGGATTGAGGCCGAA
GAGGCTATCAAAGGACTGAATGGGCAGAAGCCGCTGGGCGCAGCTGAGCCCATCACAGTC
AAGTTCGCGAACAACCCAAGTCAGAAGACGGGGCAGGCGCTGCTCACCCACCTCTACCAG
TCATCCGCCCGGCGCTACGCAGGCCCCCTACACCATCAGACCCAGCGTTTCCGGCTGGAC
AATTTGCTCAACATGGCCTACGGCGTCAAGAGGTTCTCGCCGATCGCCATCGATGGTATG
AGCGGCCTGGCGGGCGTGGGCCTGTCGGGGGGCGCGGCGGGCGCCGGCTGGTGCATCTTC
GTGTACAACCTGTCACCGGAGGCAGACGAGAGCGTGCTGTGGCAGCTGTTCGGGCCTTTT
GGGGCAGTCACCAACGTCAAGGTCATCCGTGATTTCACCACCAACAAGTGCAAGGGTTTC
GGCTTCGTGACCATGACCAACTATGACGAGGCGGCCATGGCCATCGCCAGCCTGAACGGC
TATCGCCTGGGCGAGCGCGTGCTGCAGGTCTCCTTCAAGACCAGCAAACAGCACAAGGCG

ORF Protein

Cloned ORF protein sequence for pF1KE0620 Download

>KIEE0620  360 aa
MVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFG
SIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSA
SIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAE
EAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLD
NLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPF
GAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0620 Download

>pF1KE0620  4193 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTCACTCAG
ATACTGGGGGCCATGGAGTCTCAGGTGGGGGGGGGCCCGGCCGGCCCGGCCCTGCCCAAC
GGGCCACTCCTTGGTACAAATGGAGCCACTGACGACAGCAAGACCAACCTCATCGTCAAC
TACCTGCCCCAGAACATGACCCAGGATGAGTTCAAGAGTCTCTTCGGCAGCATTGGCGAC
ATCGAGTCCTGCAAGTTGGTTCGGGACAAGATCACAGGGCAGAGCCTTGGCTACGGGTTT
GTGAACTATTCTGATCCCAATGATGCAGACAAAGCCATCAACACCCTCAACGGCCTCAAA
TTACAGACGAAGACCATCAAGGTGTCCTATGCCAGACCCAGTTCAGCATCCATCCGGGAT
GCTAACCTGTACGTCAGCGGGCTCCCCAAGACCATGAGCCAGAAAGAGATGGAGCAGCTC
TTCTCCCAGTACGGCCGCATCATCACGTCCCGCATCCTGGTGGACCAGGTCACAGGTGTC
TCTCGGGGTGTGGGATTCATCCGCTTTGACAAGAGGATTGAGGCCGAAGAGGCTATCAAA
GGACTGAATGGGCAGAAGCCGCTGGGCGCAGCTGAGCCCATCACAGTCAAGTTCGCGAAC
AACCCAAGTCAGAAGACGGGGCAGGCGCTGCTCACCCACCTCTACCAGTCATCCGCCCGG
CGCTACGCAGGCCCCCTACACCATCAGACCCAGCGTTTCCGGCTGGACAATTTGCTCAAC
ATGGCCTACGGCGTCAAGAGGTTCTCGCCGATCGCCATCGATGGTATGAGCGGCCTGGCG
GGCGTGGGCCTGTCGGGGGGCGCGGCGGGCGCCGGCTGGTGCATCTTCGTGTACAACCTG
TCACCGGAGGCAGACGAGAGCGTGCTGTGGCAGCTGTTCGGGCCTTTTGGGGCAGTCACC
AACGTCAAGGTCATCCGTGATTTCACCACCAACAAGTGCAAGGGTTTCGGCTTCGTGACC
ATGACCAACTATGACGAGGCGGCCATGGCCATCGCCAGCCTGAACGGCTATCGCCTGGGC
GAGCGCGTGCTGCAGGTCTCCTTCAAGACCAGCAAACAGCACAAGGCGGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT