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SpecieshumanProduct IDFXC07480Cloning SiteSgfI-PmeIGeneKIBB9647SymbolZNF493Descriptionzinc finger protein 493, transcript variant 1Original Clone IDcp00230
Length: 1938 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 646 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS12412.1 1.7e-149 99.8 ZNF493 CCDS42536.1 1.9e-149 99.8 ZNF493 CCDS59368.1 7.6e-93 66.6 ZNF729 CCDS74322.1 4.1e-92 65.3 ZNF91 CCDS42541.1 4.1e-92 65.3 ZNF91
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR007087 333 355 PF00096 Zinc finger IPR007087 389 411 PF00096 Zinc finger IPR007087 417 439 PF00096 Zinc finger IPR007087 501 523 PF00096 Zinc finger IPR007087 557 579 PF00096 Zinc finger IPR007087 613 635 PF00096 Zinc finger HMMSmart IPR015880 54 76 SM00355 Zinc finger IPR015880 82 104 SM00355 Zinc finger IPR015880 113 131 SM00355 Zinc finger IPR015880 137 159 SM00355 Zinc finger IPR015880 165 187 SM00355 Zinc finger IPR015880 221 243 SM00355 Zinc finger IPR015880 249 271 SM00355 Zinc finger IPR015880 277 299 SM00355 Zinc finger IPR015880 305 327 SM00355 Zinc finger IPR015880 333 355 SM00355 Zinc finger IPR015880 361 383 SM00355 Zinc finger IPR015880 389 411 SM00355 Zinc finger IPR015880 417 439 SM00355 Zinc finger IPR015880 445 467 SM00355 Zinc finger IPR015880 473 495 SM00355 Zinc finger IPR015880 501 523 SM00355 Zinc finger IPR015880 529 551 SM00355 Zinc finger IPR015880 557 579 SM00355 Zinc finger IPR015880 585 607 SM00355 Zinc finger IPR015880 613 635 SM00355 Zinc finger ProfileScan IPR007087 26 53 PS50157 Zinc finger IPR007087 54 81 PS50157 Zinc finger IPR007087 82 109 PS50157 Zinc finger IPR007087 113 136 PS50157 Zinc finger IPR007087 137 164 PS50157 Zinc finger IPR007087 165 192 PS50157 Zinc finger IPR007087 193 220 PS50157 Zinc finger IPR007087 221 248 PS50157 Zinc finger IPR007087 249 276 PS50157 Zinc finger IPR007087 277 304 PS50157 Zinc finger IPR007087 305 332 PS50157 Zinc finger IPR007087 333 360 PS50157 Zinc finger IPR007087 361 388 PS50157 Zinc finger IPR007087 389 416 PS50157 Zinc finger IPR007087 417 444 PS50157 Zinc finger IPR007087 445 472 PS50157 Zinc finger IPR007087 473 500 PS50157 Zinc finger IPR007087 501 528 PS50157 Zinc finger IPR007087 529 556 PS50157 Zinc finger IPR007087 557 584 PS50157 Zinc finger IPR007087 585 612 PS50157 Zinc finger IPR007087 613 640 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_006722943 1092 603971 65.3 98.3 XP_011526568 1092 603971 65.3 98.3 XP_016882725 1118 603971 65.3 98.3 XP_016882724 1150 603971 65.3 98.3 XP_011526567 1150 603971 65.3 98.3 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB9647 Download>KIBB9647 1938 bp ATGAATGAGTGTAATGTGCACAAAGAAGGTTATAATGAACTAAACCAGTATTTGACAACT ACCCAGAGCAAAATATTTCAATGTGATAAATATGTGAAAGTCTTTCATAAACTTTTAAAT TCAAATAGACATAACACAAAACATACTGGAAAGAAACCTTTCAAATGTAAAAAATGTGGC AAATCATTTTGCATGCTTTTACACCTATGTCAGCATAAAAGAATTCATATTAGAGAGAAT TCTTACCGATGTGAAGAATGTGGCAAAGCCTTTATCTGGTTTTCAACCCTTACTAGACAC AGGAGAGTTCATACTGGAGAGAAATCCTACAAATATGAATGTGGCAAATCTTTTAACCAG GACTCAAACCTTACTACACATAAGAGAATTCATACTGGACAGAAACCCTACAAATGTGAA GAATGTGGCACATCTTTCTACCAATTCTCATACCTTACTAGGCATAAGCTAATTCATACT AGAGAGAAACCCTATAAATGTGAACAATATGGCAAAACTTTTAACCAATCTTCAACCCTT ACTGGACATAAGATAATTCATAATGGAGAAAAACCCTATAAATTTGAAGAATGTGGCAAA GCCTTTAGTATTTTCTCAACCCCTACTAAACATAAGATAATTCACACTGAAGAGAAATCC CACAGATGTGAAGAATATTGCAAAGCTTATAAGGAGTCCTCACACCTTACTACACATAAA AGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTATT TTCTCAACCCTTACTAAACATAAGATAATTCACACTGAAGAGAAATCCCACAGATGTGAA GAATGTGGCAAAGCTTATAAGGAGTCTTCACACCTTACTACACATAAAAGAATTCATACT GGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAACCTTTAGTGTATTCTCAATTCTT ACTAAACATAAAATAATTCATACAGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAA GCTTTTAAACGATCTTCAACCCTTACTAAACATAGGATAATTCATACTGAAGAGAAACCC TACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAATCTTCAACCCTTAGTATACATAAA ATAATTCATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACGA TCTTCAACCCTTACTATACATAAAATGATTCACACTGGAGAAAAACCCTACAAATGTGAA GAATGTGGCAAAGCTTTTAATCGGTCCTCACACCTTACTACACATAAGAGAATTCATACT GGACACAAACCCTACAAATGTAAAGAATGTGGCAAATCCTTTAGTGTATTCTCAACCCTT ACTAAACACAAGATAATTCATACTGATAAGAAACCCTACAAATGTGAAGAATGTGGCAAA GCTTTTAACCGATCTTCAATCCTTAGTATACATAAGAAAATTCATACTGGAGAAAAACCC TACAAATGTGAAGAATGTGGCAAAGCTTTTAAGCGGTCCTCACACCTCGCTGGGCACAAG CAAATTCATAGTGTACAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTATA TTCTCAACCCTTACTAAACATAAGATAATTCATACTGAAGAGAAACCCTACAAATGTGAA AAATGTGGCAAAACTTTCTACCGATTCTCAAACCTTAATACGCATAAGATAATTCATACT GGAGAGAAACCTTGCAAATGTGAAGAATGTGGCAAAGCTTTTAACCATTCCTCAAACCTT ATTAAACATAAGCTAATTCATACTGGAGACAAACCCTACAAATGTGAAGCATGTGGCAAA GCTTTTAGGCGGTCTTCACATCTTAGTAGACATAAGATAATTCATATTGGAATTCATACT GAAGAGACTGTACAAAAG
Cloned ORF protein sequence for pF1KB9647 Download>KIBB9647 646 aa MNECNVHKEGYNELNQYLTTTQSKIFQCDKYVKVFHKLLNSNRHNTKHTGKKPFKCKKCG KSFCMLLHLCQHKRIHIRENSYRCEECGKAFIWFSTLTRHRRVHTGEKSYKYECGKSFNQ DSNLTTHKRIHTGQKPYKCEECGTSFYQFSYLTRHKLIHTREKPYKCEQYGKTFNQSSTL TGHKIIHNGEKPYKFEECGKAFSIFSTPTKHKIIHTEEKSHRCEEYCKAYKESSHLTTHK RIHTGEKPYKCEECGKAFSIFSTLTKHKIIHTEEKSHRCEECGKAYKESSHLTTHKRIHT GEKPYKCEECGKTFSVFSILTKHKIIHTEEKPYKCEECGKAFKRSSTLTKHRIIHTEEKP YKCEECGKAFNQSSTLSIHKIIHTGEKPYKCEECGKAFKRSSTLTIHKMIHTGEKPYKCE ECGKAFNRSSHLTTHKRIHTGHKPYKCKECGKSFSVFSTLTKHKIIHTDKKPYKCEECGK AFNRSSILSIHKKIHTGEKPYKCEECGKAFKRSSHLAGHKQIHSVQKPYKCEECGKAFSI FSTLTKHKIIHTEEKPYKCEKCGKTFYRFSNLNTHKIIHTGEKPCKCEECGKAFNHSSNL IKHKLIHTGDKPYKCEACGKAFRRSSHLSRHKIIHIGIHTEETVQK
Nucleotide Sequence (with vector) for pF1KB9647 Download>pF1KB9647 5051 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAATGAGTGT AATGTGCACAAAGAAGGTTATAATGAACTAAACCAGTATTTGACAACTACCCAGAGCAAA ATATTTCAATGTGATAAATATGTGAAAGTCTTTCATAAACTTTTAAATTCAAATAGACAT AACACAAAACATACTGGAAAGAAACCTTTCAAATGTAAAAAATGTGGCAAATCATTTTGC ATGCTTTTACACCTATGTCAGCATAAAAGAATTCATATTAGAGAGAATTCTTACCGATGT GAAGAATGTGGCAAAGCCTTTATCTGGTTTTCAACCCTTACTAGACACAGGAGAGTTCAT ACTGGAGAGAAATCCTACAAATATGAATGTGGCAAATCTTTTAACCAGGACTCAAACCTT ACTACACATAAGAGAATTCATACTGGACAGAAACCCTACAAATGTGAAGAATGTGGCACA TCTTTCTACCAATTCTCATACCTTACTAGGCATAAGCTAATTCATACTAGAGAGAAACCC TATAAATGTGAACAATATGGCAAAACTTTTAACCAATCTTCAACCCTTACTGGACATAAG ATAATTCATAATGGAGAAAAACCCTATAAATTTGAAGAATGTGGCAAAGCCTTTAGTATT TTCTCAACCCCTACTAAACATAAGATAATTCACACTGAAGAGAAATCCCACAGATGTGAA GAATATTGCAAAGCTTATAAGGAGTCCTCACACCTTACTACACATAAAAGAATTCATACT GGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTATTTTCTCAACCCTT ACTAAACATAAGATAATTCACACTGAAGAGAAATCCCACAGATGTGAAGAATGTGGCAAA GCTTATAAGGAGTCTTCACACCTTACTACACATAAAAGAATTCATACTGGAGAGAAACCC TACAAATGTGAAGAATGTGGCAAAACCTTTAGTGTATTCTCAATTCTTACTAAACATAAA ATAATTCATACAGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACGA TCTTCAACCCTTACTAAACATAGGATAATTCATACTGAAGAGAAACCCTACAAATGTGAA GAATGTGGCAAAGCTTTTAACCAATCTTCAACCCTTAGTATACATAAAATAATTCATACT GGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACGATCTTCAACCCTT ACTATACATAAAATGATTCACACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAA GCTTTTAATCGGTCCTCACACCTTACTACACATAAGAGAATTCATACTGGACACAAACCC TACAAATGTAAAGAATGTGGCAAATCCTTTAGTGTATTCTCAACCCTTACTAAACACAAG ATAATTCATACTGATAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGA TCTTCAATCCTTAGTATACATAAGAAAATTCATACTGGAGAAAAACCCTACAAATGTGAA GAATGTGGCAAAGCTTTTAAGCGGTCCTCACACCTCGCTGGGCACAAGCAAATTCATAGT GTACAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTATATTCTCAACCCTT ACTAAACATAAGATAATTCATACTGAAGAGAAACCCTACAAATGTGAAAAATGTGGCAAA ACTTTCTACCGATTCTCAAACCTTAATACGCATAAGATAATTCATACTGGAGAGAAACCT TGCAAATGTGAAGAATGTGGCAAAGCTTTTAACCATTCCTCAAACCTTATTAAACATAAG CTAATTCATACTGGAGACAAACCCTACAAATGTGAAGCATGTGGCAAAGCTTTTAGGCGG TCTTCACATCTTAGTAGACATAAGATAATTCATATTGGAATTCATACTGAAGAGACTGTA CAAAAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG TATCCGCTCAT
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