HSPB2 ORF clone pF1KB8882

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Flexi ORF Clone pF1KB8882

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Clone info.

Species

human

Clone Name

pF1KB8882 Sequence (with vector) Restriction Map

Product ID

FXC06087

HaloTag Clone PID

FHC06087

ORF Sequence

DNA sequence (546 bp)
Protein sequence (182 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587583]

Gene

KIBB8882

Symbol

HSPB2

Alias : HSP27, Hs.78846, LOH11CR1K, MKBP

Description

heat shock 27kDa protein 2

Original Clone ID

cp00917

Features of the cloned ORF sequence

Description

Length: 546 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 182 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8352.1 1.3e-81 100.0 HSPB2 CCDS8351.1 4.3e-21 43.1 CRYAB CCDS12475.1 7.6e-19 45.0 HSPB6 CCDS82651.1 4.9e-17 38.0 LOC102724652 CCDS13695.1 4.9e-17 38.0 CRYAA The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001436 20 32 PR00299 Alpha crystallin/Heat shock protein IPR001436 68 88 PR00299 Alpha crystallin/Heat shock protein IPR001436 90 103 PR00299 Alpha crystallin/Heat shock protein IPR001436 105 124 PR00299 Alpha crystallin/Heat shock protein IPR001436 127 148 PR00299 Alpha crystallin/Heat shock protein HMMPfam IPR002068 70 160 PF00011 Heat shock protein Hsp20 ProfileScan IPR002068 66 148 PS01031 Heat shock protein Hsp20
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001532 182 602179 100.0 100.0 NP_000385 173 123580,604219 38.0 86.8 NP_001531 205 602195,606595,608634 37.2 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8882 Download

>KIBB8882  546 bp
ATGTCGGGCCGCTCAGTGCCACATGCCCACCCGGCCACCGCCGAGTACGAATTTGCCAAC
CCGAGCCGCCTGGGTGAGCAGCGCTTCGGAGAAGGCCTCCTGCCAGAAGAGATCCTGACC
CCCACACTCTACCATGGCTACTATGTCCGGCCTCGGGCCGCCCCAGCTGGGGAGGGCAGC
AGGGCAGGGGCCTCCGAGCTTAGGCTCAGTGAGGGCAAGTTCCAGGCATTTCTGGATGTG
AGCCACTTTACCCCAGACGAGGTGACTGTGAGGACTGTGGATAACCTGCTGGAGGTGTCT
GCCCGGCACCCCCAGCGCCTGGACCGCCACGGCTTCGTGTCCCGAGAGTTCTGCCGCACC
TATGTCCTGCCTGCTGATGTCGACCCCTGGCGAGTCCGAGCTGCTCTCTCCCATGATGGC
ATCTTAAACCTGGAAGCACCTCGGGGTGGCCGACATTTGGACACAGAGGTCAATGAGGTC
TACATCTCCCTGCTCCCTGCGCCTCCTGATCCAGAGGAAGAGGAGGAGGCAGCCATAGTT
GAGCCC

ORF Protein

Cloned ORF protein sequence for pF1KB8882 Download

>KIBB8882  182 aa
MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGS
RAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRT
YVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIV
EP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8882 Download

>pF1KB8882  3659 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCGGGCCGC
TCAGTGCCACATGCCCACCCGGCCACCGCCGAGTACGAATTTGCCAACCCGAGCCGCCTG
GGTGAGCAGCGCTTCGGAGAAGGCCTCCTGCCAGAAGAGATCCTGACCCCCACACTCTAC
CATGGCTACTATGTCCGGCCTCGGGCCGCCCCAGCTGGGGAGGGCAGCAGGGCAGGGGCC
TCCGAGCTTAGGCTCAGTGAGGGCAAGTTCCAGGCATTTCTGGATGTGAGCCACTTTACC
CCAGACGAGGTGACTGTGAGGACTGTGGATAACCTGCTGGAGGTGTCTGCCCGGCACCCC
CAGCGCCTGGACCGCCACGGCTTCGTGTCCCGAGAGTTCTGCCGCACCTATGTCCTGCCT
GCTGATGTCGACCCCTGGCGAGTCCGAGCTGCTCTCTCCCATGATGGCATCTTAAACCTG
GAAGCACCTCGGGGTGGCCGACATTTGGACACAGAGGTCAATGAGGTCTACATCTCCCTG
CTCCCTGCGCCTCCTGATCCAGAGGAAGAGGAGGAGGCAGCCATAGTTGAGCCCGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT