RFX5 ORF clone pF1KB8384

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Flexi ORF Clone pF1KB8384

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Clone info.

Species

human

Clone Name

pF1KB8384 Sequence (with vector) Restriction Map

Product ID

FXC02801

HaloTag Clone PID

FHC02801

Original Clone PID

ORK02801

ORF Sequence

DNA sequence (1848 bp)
Protein sequence (616 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464137]

Gene

KIBB8384

Symbol

RFX5

Description

regulatory factor X, 5 (influences HLA class II expression), transcript variant 1

Original Clone ID

cp00663

Features of the cloned ORF sequence

Description

Length: 1848 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 616 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS994.1 4.7e-128 100.0 RFX5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003150 86 158 PF02257 DNA-binding RFX
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000440 616 209920,601863 100.0 100.0 XP_005245462 616 209920,601863 100.0 100.0 XP_005245463 616 209920,601863 100.0 100.0 NP_001020774 616 209920,601863 100.0 100.0 XP_011508152 616 209920,601863 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8384 Download

>KIBB8384  1848 bp
ATGGCAGAAGATGAGCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGCCCCCCCAGGT
GGTGCTGAGGCTGGGGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTACCATTTCCAAG
GCCGTGCAGAACAAAGTAGAGGGGATCCTGCAAGATGTACAGAAATTTTCTGACAATGAC
AAGCTGTATCTCTACCTTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAAGCTCAGAG
CCAAGTACACTGAGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTG
GAAGAGCACACTGACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCCTATCGGAAGTAC
TGTGAGAGTCTTGCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGA
GAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAATATTGC
TACAGTGGCATAAGGAGGAAGACCTTGGTGTCTATGCCACCCCTGCCTGGACTTGACCTA
AAGGGTTCTGAGAGTCCAGAAATGGGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTG
GTGGAGGCAGCGTGTGCCCTGACCTGTGACTGGGCAGAGCGGATCCTGAAACGGTCCTTC
AGTTCCATCGTTGAGGTCGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCGATCT
GCACATGCCCATGTGCTTAAGGCCATGGGGCTTGCTGAAGAGGACGAACATGCACCTCGG
GAACGGTCATCTAAACCAAAGAATGGTTTAGAGAACCCAGAGGGTGGAGCCCACAAGAAG
CCAGAGAGACTGGCCCAGCCTCCTAAGGATCTGGAAGCCCGAACTGGGGCCGGTCCTCTC
GCACGTGGAGAGCGGAAGAAGAGTGTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTG
CAGGTTAATGCCCTAGTGGCTCGGCTGCCTCTGCTCCTTCCCCGGGCCCCTCGCTCACTA
ATTCCGCCAATCCCAGTCTCTCCACCTATTCTGGCCCCCAGGCTTTCTTCAGGTGCCCTG
AAAGTGGCTACACTGCCTCTGTCTAGTAGGGCCGGGGCACCCCCAGCAGCTGTGCCCATC
ATTAACATGATCTTACCAACTGTTCCTGCTTTGCCTGGACCTGGACCTGGGCCTGGGCGA
GCTCCACCTGGGGGACTCACTCAGCCCCGGGGCACAGAGAACAGAGAGGTAGGCATAGGT
GGTGACCAAGGACCACATGACAAGGGTGTCAAGAGGACAGCTGAAGTACCTGTGAGTGAG
GCCAGTGGGCAGGCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATACAGCAAGT
GATGCCAAAAGGAAACGGGGGCGCCCTCGAAAAAAGTCAGGTGGAAGTGGGGAAAGGAAT
TCTACCCCTCTCAAGTCAGCAGCTGCCATGGAATCTGCCCAGTCCTCAAGGTTACCATGG
GAGACATGGGGCTCAGGAGGGGAAGGCAACTCAGCTGGAGGGGCAGAGAGGCCAGGGCCA
ATGGGAGAGGCTGAAAAGGGGGCAGTACTTGCCCAGGGTCAGGGAGATGGTACTGTTTCC
AAAGGAGGAAGGGGCCCCGGTTCCCAGCATACCAAAGAAGCAGAAGATAAAATTCCCTTG
GTCCCCTCAAAAGTGAGTGTCATCAAGGGCAGCAGAAGCCAAAAGGAGGCTTTTCCTTTG
GCAAAGGGAGAGGTAGACACTGCACCACAGGGTAATAAAGACTTAAAGGAGCATGTGCTT
CAAAGTTCCTTATCCCAGGAGCATAAAGACCCAAAAGCAACACCCCCA

ORF Protein

Cloned ORF protein sequence for pF1KB8384 Download

>KIBB8384  616 aa
MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
KLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
KGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
AHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPL
ARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGAL
KVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIG
GDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERN
STPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVS
KGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVL
QSSLSQEHKDPKATPP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8384 Download

>pF1KB8384  4961 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCAGAAGAT
GAGCCTGATGCTAAGAGCCCCAAGACTGGGGGAAGGGCCCCCCCAGGTGGTGCTGAGGCT
GGGGAACCTACCACCCTTCTTCAGAGGCTCCGAGGTACCATTTCCAAGGCCGTGCAGAAC
AAAGTAGAGGGGATCCTGCAAGATGTACAGAAATTTTCTGACAATGACAAGCTGTATCTC
TACCTTCAGCTCCCCTCAGGACCCACCACTGGAGACAAAAGCTCAGAGCCAAGTACACTG
AGCAATGAGGAGTACATGTATGCCTATAGGTGGATCCGCAACCACCTGGAAGAGCACACT
GACACCTGTCTGCCAAAGCAAAGTGTTTATGATGCCTATCGGAAGTACTGTGAGAGTCTT
GCCTGTTGCCGCCCACTCAGCACAGCCAACTTTGGCAAGATCATCAGAGAGATCTTCCCT
GACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAATATTGCTACAGTGGCATA
AGGAGGAAGACCTTGGTGTCTATGCCACCCCTGCCTGGACTTGACCTAAAGGGTTCTGAG
AGTCCAGAAATGGGCCCAGAAGTAACCCCAGCACCTCGAGATGAACTGGTGGAGGCAGCG
TGTGCCCTGACCTGTGACTGGGCAGAGCGGATCCTGAAACGGTCCTTCAGTTCCATCGTT
GAGGTCGCCCGCTTCCTGCTACAGCAGCATCTCATCTCTGCCCGATCTGCACATGCCCAT
GTGCTTAAGGCCATGGGGCTTGCTGAAGAGGACGAACATGCACCTCGGGAACGGTCATCT
AAACCAAAGAATGGTTTAGAGAACCCAGAGGGTGGAGCCCACAAGAAGCCAGAGAGACTG
GCCCAGCCTCCTAAGGATCTGGAAGCCCGAACTGGGGCCGGTCCTCTCGCACGTGGAGAG
CGGAAGAAGAGTGTAGTTGAGAGCTCGGCCCCAGGAGCCAATAACCTGCAGGTTAATGCC
CTAGTGGCTCGGCTGCCTCTGCTCCTTCCCCGGGCCCCTCGCTCACTAATTCCGCCAATC
CCAGTCTCTCCACCTATTCTGGCCCCCAGGCTTTCTTCAGGTGCCCTGAAAGTGGCTACA
CTGCCTCTGTCTAGTAGGGCCGGGGCACCCCCAGCAGCTGTGCCCATCATTAACATGATC
TTACCAACTGTTCCTGCTTTGCCTGGACCTGGACCTGGGCCTGGGCGAGCTCCACCTGGG
GGACTCACTCAGCCCCGGGGCACAGAGAACAGAGAGGTAGGCATAGGTGGTGACCAAGGA
CCACATGACAAGGGTGTCAAGAGGACAGCTGAAGTACCTGTGAGTGAGGCCAGTGGGCAG
GCTCCACCAGCTAAAGCAGCAAAGCAGGATATAGAGGATACAGCAAGTGATGCCAAAAGG
AAACGGGGGCGCCCTCGAAAAAAGTCAGGTGGAAGTGGGGAAAGGAATTCTACCCCTCTC
AAGTCAGCAGCTGCCATGGAATCTGCCCAGTCCTCAAGGTTACCATGGGAGACATGGGGC
TCAGGAGGGGAAGGCAACTCAGCTGGAGGGGCAGAGAGGCCAGGGCCAATGGGAGAGGCT
GAAAAGGGGGCAGTACTTGCCCAGGGTCAGGGAGATGGTACTGTTTCCAAAGGAGGAAGG
GGCCCCGGTTCCCAGCATACCAAAGAAGCAGAAGATAAAATTCCCTTGGTCCCCTCAAAA
GTGAGTGTCATCAAGGGCAGCAGAAGCCAAAAGGAGGCTTTTCCTTTGGCAAAGGGAGAG
GTAGACACTGCACCACAGGGTAATAAAGACTTAAAGGAGCATGTGCTTCAAAGTTCCTTA
TCCCAGGAGCATAAAGACCCAAAAGCAACACCCCCAGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT