TIAL1 ORF clone pF1KB7948

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB7948

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Clone info.

Species

human

Clone Name

pF1KB7948 Sequence (with vector) Restriction Map

Product ID

FXC03409

HaloTag Clone PID

FHC03409

ORF Sequence

DNA sequence (1125 bp)
Protein sequence (375 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527493]

Gene

KIBB7948

Symbol

TIAL1

Alias : TCBP, TIAR

Description

TIA1 cytotoxic granule-associated RNA binding protein-like 1, transcript variant 1

Original Clone ID

cs00448

Features of the cloned ORF sequence

Description

Length: 1125 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 375 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7613.1 1.5e-101 100.0 TIAL1 CCDS31295.1 5e-90 95.7 TIAL1 CCDS1900.1 8e-78 79.5 TIA1 CCDS1901.1 1.9e-56 77.0 TIA1 CCDS9311.1 1.6e-12 27.0 PABPC3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 11 79 PF00076 RNA recognition motif domain IPR000504 99 169 PF00076 RNA recognition motif domain IPR000504 207 271 PF00076 RNA recognition motif domain HMMSmart IPR003954 10 81 SM00361 RNA recognition motif domain IPR000504 10 81 SM00360 RNA recognition motif domain IPR003954 98 171 SM00361 RNA recognition motif domain IPR000504 98 171 SM00360 RNA recognition motif domain IPR003954 206 273 SM00361 RNA recognition motif domain IPR000504 206 273 SM00360 RNA recognition motif domain ProfileScan IPR000504 9 85 PS50102 RNA recognition motif domain IPR000504 97 175 PS50102 RNA recognition motif domain IPR000504 205 277 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003243 375 603413 100.0 100.0 NP_001310898 336 603413 100.0 89.6 NP_001310899 353 603413 99.1 89.3 NP_001029097 392 603413 95.7 100.0 NP_001310897 360 603413 96.8 89.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7948 Download

>KIBB7948  1125 bp
ATGATGGAAGACGACGGGCAGCCCCGGACTCTATACGTAGGTAACCTTTCCAGAGATGTG
ACAGAAGTCCTTATACTTCAGTTGTTCAGTCAGATTGGACCCTGTAAAAGCTGTAAAATG
ATAACAGAGCATACAAGCAATGACCCATATTGCTTTGTGGAATTTTATGAACACAGAGAT
GCAGCTGCTGCATTAGCTGCTATGAATGGGAGAAAAATTTTGGGAAAGGAGGTCAAAGTA
AACTGGGCAACCACACCAAGTAGCCAGAAAAAAGATACTTCCAATCACTTCCATGTGTTT
GTTGGGGATTTGAGTCCAGAAATTACAACAGAAGATATCAAATCAGCATTTGCCCCCTTT
GGTAAAATATCGGATGCCCGGGTAGTTAAAGACATGGCAACTGGAAAATCCAAAGGCTAT
GGTTTTGTATCTTTTTATAACAAACTGGATGCAGAAAATGCGATTGTGCATATGGGCGGT
CAGTGGTTGGGTGGTCGTCAAATCCGAACCAATTGGGCCACTCGTAAACCACCTGCACCT
AAAAGTACACAAGAAAACAACACTAAGCAGTTGAGATTTGAAGATGTAGTAAACCAGTCA
AGTCCAAAAAATTGTACTGTGTACTGTGGAGGAATTGCGTCTGGGTTAACAGATCAGCTT
ATGAGACAGACATTCTCACCATTTGGACAAATTATGGAAATAAGAGTTTTCCCAGAAAAG
GGCTATTCATTTGTCAGATTTTCAACCCATGAAAGTGCAGCCCATGCCATTGTTTCGGTG
AACGGTACTACGATTGAAGGACATGTGGTTAAATGCTATTGGGGTAAAGAATCTCCTGAT
ATGACTAAAAACTTCCAACAGGTTGACTATAGTCAATGGGGCCAATGGAGCCAAGTGTAT
GGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCGCCTTATGGA
GTATACGGGCAACCATGGAATCAACAAGGATTTGGAGTAGATCAATCACCTTCTGCTGCT
TGGATGGGTGGATTTGGTGCTCAGCCTCCCCAAGGACAAGCTCCTCCCCCTGTAATACCT
CCTCCTAACCAAGCCGGATATGGTATGGCAAGTTACCAAACACAG

ORF Protein

Cloned ORF protein sequence for pF1KB7948 Download

>KIBB7948  375 aa
MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRD
AAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPF
GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAP
KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK
GYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVY
GNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMGGFGAQPPQGQAPPPVIP
PPNQAGYGMASYQTQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7948 Download

>pF1KB7948  4238 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGGAAGAC
GACGGGCAGCCCCGGACTCTATACGTAGGTAACCTTTCCAGAGATGTGACAGAAGTCCTT
ATACTTCAGTTGTTCAGTCAGATTGGACCCTGTAAAAGCTGTAAAATGATAACAGAGCAT
ACAAGCAATGACCCATATTGCTTTGTGGAATTTTATGAACACAGAGATGCAGCTGCTGCA
TTAGCTGCTATGAATGGGAGAAAAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAACC
ACACCAAGTAGCCAGAAAAAAGATACTTCCAATCACTTCCATGTGTTTGTTGGGGATTTG
AGTCCAGAAATTACAACAGAAGATATCAAATCAGCATTTGCCCCCTTTGGTAAAATATCG
GATGCCCGGGTAGTTAAAGACATGGCAACTGGAAAATCCAAAGGCTATGGTTTTGTATCT
TTTTATAACAAACTGGATGCAGAAAATGCGATTGTGCATATGGGCGGTCAGTGGTTGGGT
GGTCGTCAAATCCGAACCAATTGGGCCACTCGTAAACCACCTGCACCTAAAAGTACACAA
GAAAACAACACTAAGCAGTTGAGATTTGAAGATGTAGTAAACCAGTCAAGTCCAAAAAAT
TGTACTGTGTACTGTGGAGGAATTGCGTCTGGGTTAACAGATCAGCTTATGAGACAGACA
TTCTCACCATTTGGACAAATTATGGAAATAAGAGTTTTCCCAGAAAAGGGCTATTCATTT
GTCAGATTTTCAACCCATGAAAGTGCAGCCCATGCCATTGTTTCGGTGAACGGTACTACG
ATTGAAGGACATGTGGTTAAATGCTATTGGGGTAAAGAATCTCCTGATATGACTAAAAAC
TTCCAACAGGTTGACTATAGTCAATGGGGCCAATGGAGCCAAGTGTATGGAAACCCACAA
CAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCGCCTTATGGAGTATACGGGCAA
CCATGGAATCAACAAGGATTTGGAGTAGATCAATCACCTTCTGCTGCTTGGATGGGTGGA
TTTGGTGCTCAGCCTCCCCAAGGACAAGCTCCTCCCCCTGTAATACCTCCTCCTAACCAA
GCCGGATATGGTATGGCAAGTTACCAAACACAGGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT