-
SpecieshumanProduct IDFXC07498Cloning SiteSgfI-PmeIGeneKIBB7879SymbolZNF587
Alias : ZF6Descriptionzinc finger protein 587, transcript variant 1Original Clone IDcs00379
Length: 1725 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 575 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS12964.1 2.4e-129 100.0 ZNF587 CCDS56110.1 1e-128 99.8 ZNF587 CCDS12965.1 1.3e-126 98.1 ZNF417 CCDS74469.1 5.5e-126 97.9 ZNF417 CCDS42642.1 1.9e-79 65.1 ZNF418
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 15 55 PF01352 Krueppel-associated box IPR007087 240 262 PF00096 Zinc finger IPR007087 268 290 PF00096 Zinc finger IPR007087 296 318 PF00096 Zinc finger IPR007087 324 346 PF00096 Zinc finger IPR007087 380 402 PF00096 Zinc finger IPR007087 408 430 PF00096 Zinc finger IPR007087 436 458 PF00096 Zinc finger IPR007087 520 542 PF00096 Zinc finger IPR007087 548 570 PF00096 Zinc finger HMMSmart IPR001909 15 75 SM00349 Krueppel-associated box IPR015880 92 114 SM00355 Zinc finger IPR015880 240 262 SM00355 Zinc finger IPR015880 268 290 SM00355 Zinc finger IPR015880 296 318 SM00355 Zinc finger IPR015880 324 346 SM00355 Zinc finger IPR015880 352 374 SM00355 Zinc finger IPR015880 380 402 SM00355 Zinc finger IPR015880 408 430 SM00355 Zinc finger IPR015880 436 458 SM00355 Zinc finger IPR015880 464 486 SM00355 Zinc finger IPR015880 492 514 SM00355 Zinc finger IPR015880 520 542 SM00355 Zinc finger IPR015880 548 570 SM00355 Zinc finger ProfileScan IPR001909 15 88 PS50805 Krueppel-associated box IPR007087 120 147 PS50157 Zinc finger IPR007087 240 267 PS50157 Zinc finger IPR007087 268 295 PS50157 Zinc finger IPR007087 296 323 PS50157 Zinc finger IPR007087 324 351 PS50157 Zinc finger IPR007087 352 379 PS50157 Zinc finger IPR007087 380 407 PS50157 Zinc finger IPR007087 408 435 PS50157 Zinc finger IPR007087 436 463 PS50157 Zinc finger IPR007087 464 491 PS50157 Zinc finger IPR007087 492 519 PS50157 Zinc finger IPR007087 520 547 PS50157 Zinc finger IPR007087 548 575 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005764 627 606956 56.0 99.1 NP_942152 564 601856 54.1 95.1 NP_006376 577 601856 54.5 93.2 NP_001252529 503 601856 53.2 87.7 NP_001252528 555 601856 52.5 86.1 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB7879 Download>KIBB7879 1725 bp ATGGCAGCGGCTGTGCCGAGGCGCCCAACTCAGCAGGGCACTGTGACCTTTGAAGATGTG GCTGTGAACTTTTCCCAGGAGGAGTGGTGTCTTCTTAGTGAGGCTCAGAGGTGCTTGTAC CGTGATGTGATGCTAGAGAACCTGGCTCTCATATCCTCGCTGGGTTGTTGGTGTGGATCA AAAGATGAGGAGGCACCTTGTAAGCAGAGAATTTCTGTACAAAGAGAGTCTCAGAGCAGG ACTCCTAGGGCAGGTGTTTCTCCTAAGAAGGCTCACCCCTGTGAAATGTGTGGCCTCATC TTGGAGGATGTTTTTCACTTTGCTGACCACCAGGAAACTCATCACAAGCAGAAGCTGAAC AGGAGTGGAGCATGTGGAAAAAACTTGGATGACACTGCATACCTTCATCAGCACCAGAAG CAGCATATTGGAGAGAAATTCTACAGAAAGAGTGTCAGAGAAGCATCGTTTGTAAAGAAA CGTAAGCTCAGGGTGTCACAGGAGCCATTTGTCTTCCGCGAGTTTGGGAAGGACGTTCTG CCCAGTTCAGGATTGTGCCAAGAAGAAGCTGCTGTAGAGAAGACAGACAGTGAAACTATG CATGGCCCACCCTTTCAGGAGGGAAAAACTAATTACAGTTGTGGAAAACGCACAAAAGCC TTCAGCACCAAACACTCAGTTATTCCACACCAGAAACTTTTCACTAGAGATGGATGTTAT GTGTGCAGTGATTGTGGAAAATCCTTTAGCAGATATGTCAGCTTCAGTAATCATCAGCGA GATCACACTGCAAAAGGACCTTATGATTGTGGAGAGTGTGGGAAATCTTATAGTCGAAAG AGCAGCCTTATTCAACATCAGCGAGTCCACACTGGACAGACAGCTTATCCCTGTGAGGAG TGCGGGAAATCTTTTAGTCAGAAGGGCAGCCTTATTAGCCATCAGCTTGTTCACACTGGA GAAGGGCCTTATGAGTGTAGAGAATGTGGGAAATCTTTTGGTCAAAAGGGTAACCTCATT CAACATCAGCAAGGTCACACTGGAGAGAGAGCTTATCACTGTGGGGAATGTGGGAAATCT TTTCGTCAGAAGTTCTGCTTTATTAACCATCAGCGTGTTCACACTGGAGAAAGGCCTTAC AAGTGTGGAGAATGTGGGAAATCTTTTGGTCAAAAGGGCAACCTCGTTCACCATCAGCGA GGTCATACTGGAGAAAGGCCCTATGAGTGCAAGGAATGTGGGAAATCATTTAGGTACAGA TCCCACCTCACTGAACACCAGAGACTTCACACTGGGGAAAGACCTTACAATTGTAGGGAA TGTGGGAAATTATTTAACAGGAAGTATCATCTTCTGGTTCATGAGAGAGTTCACACTGGA GAAAGGCCATATGCGTGTGAGGTATGTGGGAAATTATTTGGCAATAAGCACAGCGTGACT ATACATCAGAGGATTCACACTGGAGAAAGGCCGTATGAATGCAGTGAATGTGGGAAATCA TTTCTTTCCAGCTCTGCGCTTCATGTTCATAAAAGAGTTCATTCTGGACAAAAGCCTTAT AAGTGCAGTGAATGTGGAAAATCCTTTTCTGAATGTTCCAGTCTCATTAAACACAGGAGA ATTCACACTGGAGAAAGGCCTTATGAATGCACCAAATGTGGAAAAACATTTCAGCGAAGC TCTACCCTCCTTCATCATCAGAGTTCACACAGGAGAAAGGCCTTA
Cloned ORF protein sequence for pF1KB7879 Download>KIBB7879 575 aa MAAAVPRRPTQQGTVTFEDVAVNFSQEEWCLLSEAQRCLYRDVMLENLALISSLGCWCGS KDEEAPCKQRISVQRESQSRTPRAGVSPKKAHPCEMCGLILEDVFHFADHQETHHKQKLN RSGACGKNLDDTAYLHQHQKQHIGEKFYRKSVREASFVKKRKLRVSQEPFVFREFGKDVL PSSGLCQEEAAVEKTDSETMHGPPFQEGKTNYSCGKRTKAFSTKHSVIPHQKLFTRDGCY VCSDCGKSFSRYVSFSNHQRDHTAKGPYDCGECGKSYSRKSSLIQHQRVHTGQTAYPCEE CGKSFSQKGSLISHQLVHTGEGPYECRECGKSFGQKGNLIQHQQGHTGERAYHCGECGKS FRQKFCFINHQRVHTGERPYKCGECGKSFGQKGNLVHHQRGHTGERPYECKECGKSFRYR SHLTEHQRLHTGERPYNCRECGKLFNRKYHLLVHERVHTGERPYACEVCGKLFGNKHSVT IHQRIHTGERPYECSECGKSFLSSSALHVHKRVHSGQKPYKCSECGKSFSECSSLIKHRR IHTGERPYECTKCGKTFQRSSTLLHHQSSHRRKAL
Nucleotide Sequence (with vector) for pF1KB7879 Download>pF1KB7879 4838 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCAGCGGCT GTGCCGAGGCGCCCAACTCAGCAGGGCACTGTGACCTTTGAAGATGTGGCTGTGAACTTT TCCCAGGAGGAGTGGTGTCTTCTTAGTGAGGCTCAGAGGTGCTTGTACCGTGATGTGATG CTAGAGAACCTGGCTCTCATATCCTCGCTGGGTTGTTGGTGTGGATCAAAAGATGAGGAG GCACCTTGTAAGCAGAGAATTTCTGTACAAAGAGAGTCTCAGAGCAGGACTCCTAGGGCA GGTGTTTCTCCTAAGAAGGCTCACCCCTGTGAAATGTGTGGCCTCATCTTGGAGGATGTT TTTCACTTTGCTGACCACCAGGAAACTCATCACAAGCAGAAGCTGAACAGGAGTGGAGCA TGTGGAAAAAACTTGGATGACACTGCATACCTTCATCAGCACCAGAAGCAGCATATTGGA GAGAAATTCTACAGAAAGAGTGTCAGAGAAGCATCGTTTGTAAAGAAACGTAAGCTCAGG GTGTCACAGGAGCCATTTGTCTTCCGCGAGTTTGGGAAGGACGTTCTGCCCAGTTCAGGA TTGTGCCAAGAAGAAGCTGCTGTAGAGAAGACAGACAGTGAAACTATGCATGGCCCACCC TTTCAGGAGGGAAAAACTAATTACAGTTGTGGAAAACGCACAAAAGCCTTCAGCACCAAA CACTCAGTTATTCCACACCAGAAACTTTTCACTAGAGATGGATGTTATGTGTGCAGTGAT TGTGGAAAATCCTTTAGCAGATATGTCAGCTTCAGTAATCATCAGCGAGATCACACTGCA AAAGGACCTTATGATTGTGGAGAGTGTGGGAAATCTTATAGTCGAAAGAGCAGCCTTATT CAACATCAGCGAGTCCACACTGGACAGACAGCTTATCCCTGTGAGGAGTGCGGGAAATCT TTTAGTCAGAAGGGCAGCCTTATTAGCCATCAGCTTGTTCACACTGGAGAAGGGCCTTAT GAGTGTAGAGAATGTGGGAAATCTTTTGGTCAAAAGGGTAACCTCATTCAACATCAGCAA GGTCACACTGGAGAGAGAGCTTATCACTGTGGGGAATGTGGGAAATCTTTTCGTCAGAAG TTCTGCTTTATTAACCATCAGCGTGTTCACACTGGAGAAAGGCCTTACAAGTGTGGAGAA TGTGGGAAATCTTTTGGTCAAAAGGGCAACCTCGTTCACCATCAGCGAGGTCATACTGGA GAAAGGCCCTATGAGTGCAAGGAATGTGGGAAATCATTTAGGTACAGATCCCACCTCACT GAACACCAGAGACTTCACACTGGGGAAAGACCTTACAATTGTAGGGAATGTGGGAAATTA TTTAACAGGAAGTATCATCTTCTGGTTCATGAGAGAGTTCACACTGGAGAAAGGCCATAT GCGTGTGAGGTATGTGGGAAATTATTTGGCAATAAGCACAGCGTGACTATACATCAGAGG ATTCACACTGGAGAAAGGCCGTATGAATGCAGTGAATGTGGGAAATCATTTCTTTCCAGC TCTGCGCTTCATGTTCATAAAAGAGTTCATTCTGGACAAAAGCCTTATAAGTGCAGTGAA TGTGGAAAATCCTTTTCTGAATGTTCCAGTCTCATTAAACACAGGAGAATTCACACTGGA GAAAGGCCTTATGAATGCACCAAATGTGGAAAAACATTTCAGCGAAGCTCTACCCTCCTT CATCATCAGAGTTCACACAGGAGAAAGGCCTTAGTTTAAACGAATTCGAGCTCGGTACCC GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
more Linker info
