PRICKLE3 ORF clone pF1KB7840

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Flexi ORF Clone pF1KB7840

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Clone info.

Species

human

Clone Name

pF1KB7840 Sequence (with vector) Restriction Map

Product ID

FXC05845

HaloTag Clone PID

FHC05845

ORF Sequence

DNA sequence (1845 bp)
Protein sequence (615 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464065]

Gene

KIBB7840

Symbol

PRICKLE3

Alias : LMO6, LOAM, Pk3

Description

prickle homolog 3, transcript variant 1

Original Clone ID

cs00340

Features of the cloned ORF sequence

Description

Length: 1845 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 615 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14320.1 6e-135 100.0 PRICKLE3 CCDS78481.1 1e-118 100.0 PRICKLE3 CCDS2902.1 2.1e-53 50.8 PRICKLE2 CCDS8742.1 6.9e-46 65.1 PRICKLE1 CCDS34449.1 2.1e-18 36.2 PRICKLE4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR010442 75 177 PF06297 PET domain IPR001781 186 245 PF00412 Zinc finger IPR001781 251 306 PF00412 Zinc finger IPR001781 311 364 PF00412 Zinc finger HMMSmart IPR001781 185 242 SM00132 Zinc finger IPR001781 250 302 SM00132 Zinc finger IPR001781 310 365 SM00132 Zinc finger ProfileScan IPR010442 74 182 PS51303 PET domain IPR001781 184 248 PS50023 Zinc finger IPR001781 249 309 PS50023 Zinc finger IPR001781 310 373 PS50023 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006141 615 300111 100.0 100.0 NP_001294908 547 300111 100.0 88.9 XP_011531737 900 608501,613832 51.8 97.4 XP_011531736 930 608501,613832 51.8 97.4 XP_011531742 679 608501,613832 52.3 94.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7840 Download

>KIBB7840  1845 bp
ATGTTCGCGCGTGGGTCCCGGAGGCGCCGCTCCGGGCGTGCGCCTCCAGAGGCAGAGGAC
CCAGACCGGGGCCAGCCCTGCAACTCCTGTAGGGAGCAGTGCCCTGGCTTCCTGCTCCAC
GGCTGGAGAAAGATCTGCCAGCATTGCAAATGCCCGCGGGAGGAGCATGCAGTGCACGCG
GTGCCTGTGGACCTGGAACGCATCATGTGTCGGCTAATCTCGGACTTCCAGCGCCACTCC
ATCTCCGACGACGACTCAGGCTGTGCATCGGAGGAGTATGCCTGGGTGCCCCCAGGCCTT
AAGCCGGAGCAGGTATATCAATTTTTCAGCTGCCTCCCAGAGGACAAGGTCCCCTACGTC
AACAGTCCTGGGGAGAAATACAGGATCAAGCAGCTGCTGCACCAGCTGCCCCCACACGAC
AGTGAGGCACAGTACTGCACAGCACTGGAAGAGGAGGAAAAGAAAGAGCTCCGAGCCTTT
AGCCAGCAGCGGAAGCGGGAGAATCTGGGGCGTGGCATCGTGCGCATCTTCCCGGTGACC
ATCACTGGGGCCATCTGTGAGGAGTGCGGAAAGCAGATTGGAGGTGGGGACATCGCAGTG
TTTGCCAGCCGTGCAGGCCTGGGTGCCTGCTGGCACCCACAGTGCTTCGTGTGTACCACG
TGCCAGGAACTGCTGGTTGACCTCATCTACTTCTACCATGTTGGCAAGGTCTACTGCGGG
CGTCACCATGCCGAATGCCTGCGTCCACGCTGCCAAGCCTGTGACGAGATCATCTTCTCC
CCTGAGTGCACGGAGGCTGAGGGCCGCCACTGGCACATGGATCACTTCTGCTGCTTTGAG
TGTGAAGCTTCACTAGGAGGGCAGCGCTATGTCATGCGTCAGAGCCGCCCCCACTGCTGC
GCCTGCTACGAGGCCCGCCACGCGGAGTACTGTGATGGCTGTGGGGAGCACATCGGCCTG
GACCAAGGCCAGATGGCTTACGAGGGCCAGCACTGGCATGCCTCAGACCGCTGCTTCTGC
TGTAGTCGCTGTGGGCGGGCCCTGCTGGGCCGCCCATTCCTGCCACGCCGAGGCCTAATC
TTCTGCTCTCGAGCCTGCAGCCTTGGGTCCGAGCCCACAGCTCCAGGGCCGAGCCGCCGC
AGCTGGAGTGCCGGCCCTGTCACAGCCCCACTTGCAGCCTCCACAGCCTCTTTCTCTGCT
GTGAAGGGGGCATCAGAGACCACCACCAAAGGCACCAGCACAGAGTTAGCGCCAGCTACA
GGCCCTGAGGAGCCCTCCCGCTTTCTGAGAGGGGCTCCCCACCGCCACTCCATGCCGGAA
CTGGGGCTCCGCAGTGTCCCCGAGCCGCCCCCAGAGTCCCCCGGCCAGCCTAACCTGCGC
CCAGATGATAGTGCCTTCGGTCGTCAGAGCACCCCACGCGTCAGCTTCCGCGACCCTCTG
GTGTCTGAAGGAGGCCCGCGCCGGACCCTGAGTGCACCCCCGGCCCAGCGCCGCAGGCCA
CGCAGTCCCCCACCCAGGGCCCCCAGCCGTCGCCGCCACCATCATCATAATCACCATCAC
CATCACAACCGCCACCCAAGCAGACGTCGCCACTATCAATGTGACGCGGGATCAGGGTCA
GACTCGGAATCTTGCTCCAGCTCGCCCTCCAGTTCCAGTTCCGAATCATCAGAGGATGAT
GGCTTCTTCCTAGGAGAGCGCATCCCTCTGCCCCCGCATTTGTGCAGGCCCATGCCTGCT
CAGGACACTGCAATGGAGACCTTCAACTCCCCATCTTTATCGCTCCCCAGGGACTCTCGC
GCAGGGATGCCTCGTCAGGCCCGAGACAAGAACTGCATCGTGGCT

ORF Protein

Cloned ORF protein sequence for pF1KB7840 Download

>KIBB7840  615 aa
MFARGSRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHA
VPVDLERIMCRLISDFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYV
NSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVT
ITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCTTCQELLVDLIYFYHVGKVYCG
RHHAECLRPRCQACDEIIFSPECTEAEGRHWHMDHFCCFECEASLGGQRYVMRQSRPHCC
ACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLI
FCSRACSLGSEPTAPGPSRRSWSAGPVTAPLAASTASFSAVKGASETTTKGTSTELAPAT
GPEEPSRFLRGAPHRHSMPELGLRSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPL
VSEGGPRRTLSAPPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCDAGSGS
DSESCSSSPSSSSSESSEDDGFFLGERIPLPPHLCRPMPAQDTAMETFNSPSLSLPRDSR
AGMPRQARDKNCIVA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7840 Download

>pF1KB7840  4958 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTTCGCGCGT
GGGTCCCGGAGGCGCCGCTCCGGGCGTGCGCCTCCAGAGGCAGAGGACCCAGACCGGGGC
CAGCCCTGCAACTCCTGTAGGGAGCAGTGCCCTGGCTTCCTGCTCCACGGCTGGAGAAAG
ATCTGCCAGCATTGCAAATGCCCGCGGGAGGAGCATGCAGTGCACGCGGTGCCTGTGGAC
CTGGAACGCATCATGTGTCGGCTAATCTCGGACTTCCAGCGCCACTCCATCTCCGACGAC
GACTCAGGCTGTGCATCGGAGGAGTATGCCTGGGTGCCCCCAGGCCTTAAGCCGGAGCAG
GTATATCAATTTTTCAGCTGCCTCCCAGAGGACAAGGTCCCCTACGTCAACAGTCCTGGG
GAGAAATACAGGATCAAGCAGCTGCTGCACCAGCTGCCCCCACACGACAGTGAGGCACAG
TACTGCACAGCACTGGAAGAGGAGGAAAAGAAAGAGCTCCGAGCCTTTAGCCAGCAGCGG
AAGCGGGAGAATCTGGGGCGTGGCATCGTGCGCATCTTCCCGGTGACCATCACTGGGGCC
ATCTGTGAGGAGTGCGGAAAGCAGATTGGAGGTGGGGACATCGCAGTGTTTGCCAGCCGT
GCAGGCCTGGGTGCCTGCTGGCACCCACAGTGCTTCGTGTGTACCACGTGCCAGGAACTG
CTGGTTGACCTCATCTACTTCTACCATGTTGGCAAGGTCTACTGCGGGCGTCACCATGCC
GAATGCCTGCGTCCACGCTGCCAAGCCTGTGACGAGATCATCTTCTCCCCTGAGTGCACG
GAGGCTGAGGGCCGCCACTGGCACATGGATCACTTCTGCTGCTTTGAGTGTGAAGCTTCA
CTAGGAGGGCAGCGCTATGTCATGCGTCAGAGCCGCCCCCACTGCTGCGCCTGCTACGAG
GCCCGCCACGCGGAGTACTGTGATGGCTGTGGGGAGCACATCGGCCTGGACCAAGGCCAG
ATGGCTTACGAGGGCCAGCACTGGCATGCCTCAGACCGCTGCTTCTGCTGTAGTCGCTGT
GGGCGGGCCCTGCTGGGCCGCCCATTCCTGCCACGCCGAGGCCTAATCTTCTGCTCTCGA
GCCTGCAGCCTTGGGTCCGAGCCCACAGCTCCAGGGCCGAGCCGCCGCAGCTGGAGTGCC
GGCCCTGTCACAGCCCCACTTGCAGCCTCCACAGCCTCTTTCTCTGCTGTGAAGGGGGCA
TCAGAGACCACCACCAAAGGCACCAGCACAGAGTTAGCGCCAGCTACAGGCCCTGAGGAG
CCCTCCCGCTTTCTGAGAGGGGCTCCCCACCGCCACTCCATGCCGGAACTGGGGCTCCGC
AGTGTCCCCGAGCCGCCCCCAGAGTCCCCCGGCCAGCCTAACCTGCGCCCAGATGATAGT
GCCTTCGGTCGTCAGAGCACCCCACGCGTCAGCTTCCGCGACCCTCTGGTGTCTGAAGGA
GGCCCGCGCCGGACCCTGAGTGCACCCCCGGCCCAGCGCCGCAGGCCACGCAGTCCCCCA
CCCAGGGCCCCCAGCCGTCGCCGCCACCATCATCATAATCACCATCACCATCACAACCGC
CACCCAAGCAGACGTCGCCACTATCAATGTGACGCGGGATCAGGGTCAGACTCGGAATCT
TGCTCCAGCTCGCCCTCCAGTTCCAGTTCCGAATCATCAGAGGATGATGGCTTCTTCCTA
GGAGAGCGCATCCCTCTGCCCCCGCATTTGTGCAGGCCCATGCCTGCTCAGGACACTGCA
ATGGAGACCTTCAACTCCCCATCTTTATCGCTCCCCAGGGACTCTCGCGCAGGGATGCCT
CGTCAGGCCCGAGACAAGAACTGCATCGTGGCTGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT