-
SpecieshumanProduct IDFXC10669Cloning SiteSgfI-PmeIGeneKIBB7812SymbolZNF85
Alias : HPF4, HTF1Descriptionzinc finger protein 85, transcript variant 1Original Clone IDcs00312
Length: 1785 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 595 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS32977.1 3.2e-126 99.2 ZNF85 CCDS32973.1 7.5e-93 74.8 ZNF93 CCDS75605.1 1.5e-92 75.2 ZNF107 CCDS59372.1 2.4e-92 73.8 ZNF726 CCDS12414.2 3.5e-91 75.0 ZNF681
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 4 44 PF01352 Krueppel-associated box IPR007087 202 224 PF00096 Zinc finger IPR007087 230 252 PF00096 Zinc finger IPR007087 258 280 PF00096 Zinc finger IPR007087 286 308 PF00096 Zinc finger IPR007087 314 336 PF00096 Zinc finger IPR007087 342 364 PF00096 Zinc finger IPR007087 398 420 PF00096 Zinc finger IPR007087 454 476 PF00096 Zinc finger IPR007087 510 532 PF00096 Zinc finger IPR007087 538 560 PF00096 Zinc finger HMMSmart IPR001909 4 64 SM00349 Krueppel-associated box IPR015880 174 196 SM00355 Zinc finger IPR015880 202 224 SM00355 Zinc finger IPR015880 230 252 SM00355 Zinc finger IPR015880 258 280 SM00355 Zinc finger IPR015880 286 308 SM00355 Zinc finger IPR015880 314 336 SM00355 Zinc finger IPR015880 342 364 SM00355 Zinc finger IPR015880 370 392 SM00355 Zinc finger IPR015880 398 420 SM00355 Zinc finger IPR015880 426 448 SM00355 Zinc finger IPR015880 454 476 SM00355 Zinc finger IPR015880 482 504 SM00355 Zinc finger IPR015880 510 532 SM00355 Zinc finger IPR015880 538 560 SM00355 Zinc finger IPR015880 566 588 SM00355 Zinc finger ProfileScan IPR001909 4 75 PS50805 Krueppel-associated box IPR007087 174 197 PS50157 Zinc finger IPR007087 202 229 PS50157 Zinc finger IPR007087 230 257 PS50157 Zinc finger IPR007087 258 285 PS50157 Zinc finger IPR007087 286 313 PS50157 Zinc finger IPR007087 314 341 PS50157 Zinc finger IPR007087 342 369 PS50157 Zinc finger IPR007087 370 397 PS50157 Zinc finger IPR007087 398 425 PS50157 Zinc finger IPR007087 426 453 PS50157 Zinc finger IPR007087 454 481 PS50157 Zinc finger IPR007087 482 509 PS50157 Zinc finger IPR007087 510 537 PS50157 Zinc finger IPR007087 538 565 PS50157 Zinc finger IPR007087 566 593 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003420 595 603899 99.2 100.0 NP_001243102 531 603899 99.1 89.2 NP_001243100 625 603899 94.2 100.0 XP_011526565 640 603899 92.0 97.8 XP_011526566 536 603899 98.5 87.7 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB7812 Download>KIBB7812 1785 bp ATGGGACCATTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGAAGGAGTGGCAATGC CTGGACACTGCACAGCGGAATTTATATAGAAATGTGATGTTAGAGAACTACAGAAACCTG GTCTTCCTGGGTATTACTGTTTCTAAGCCAGACCTGATCACTTGTCTGGAGCAAGGGAAA GAGGCCTGGAGTATGAAGAGACATGAGATCATGGTGGCCAAACCCACAGTTATGTGTTCT CATTTTGCCCGAGACCTTTGGCCGGAGCAGAATATAAAAGATTCTTTCCAAAAAGTGACA CTGAAAAGATATGGAAAATGTAGACATGAAAATTTACCATTAATAAAAGGCTGTGAAAGT ATGGATGAGTGTAAGATGCACAAAGGAGGTTGTAATGGACTTAACCAATGTCTCACAGCT ACCCAGAGCAAAATATTTCAATGTGATAAATATGTAAAAGTCGCTCATAAATTTTCAAAT TCAAACAGACATGAGATAAGACATACTAAAAAGAAACCTTTCAAATGTAGAAAATGTGGC AAATCATTTCGCATGATTTCATGCCTAACTGAACATAGCAGAATTCATACTAGAGTAAAT TTCTACAAATGTGAAGAATGTGGAAAAGCCTTTAACTGGTCCTCAACCCTTACTAAACAT AAGAGAATTCATACGGGAGAGAAACCTTACAAATGTGAAGAATGTGGTAAAGCCTTTAAC CAGTCCTCAAACCTTATTAAACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGT GAAGAATGTGGCAAAACTTTTAACCGATCCTCAACTCTTACTACCCATAAGATAATTCAT ACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGTAAAGCTTTTAACCGTTCTTCAACC CTTACTACCCATAGAAAAATTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGGC AAAGCCTTTAAGCAGTCCTCAAACCTTACTACACATAAGATAATTCATACTGGAGAGAAA CCCTACAAATGTAAAAAATGTGGAAAAGCCTTTAACCAGTCTGCACACCTTACTACACAT GAGGTAATTCATACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGAAAAGCCTTTAAT CATTTCTCACACCTTACTACACATAAGATAATTCATACTGGAGAGAAACCTTACAAATGT AAAGAATGTGGTAAAGCTTTTAAACACTCTTCAACCCTTACTAAACATAAGATAATTCAT ACTGGAGAGAAGCCTTACAAATGTAAAGAATGTGAAAAAGCTTTTAACCAATCCTCAAAA CTTACTGAACATAAGAAAATTCATACTGGAGAGAAACCCTATGAATGTGAAAAATGTGGC AAAGCTTTTAACCAGTCCTCAAATCTTACTAGACATAAGAAAAGTCATACTGAAGAGAAA CCTTACAAATGTGAAGAATGTGGCAAAGGTTTTAAATGGCCCTCAACCCTTACTATCCAT AAGATAATTCATACTGGAGAGAAACCATACAAATGTGAAGAATGTGGCAAAGCTTTTAAC CAATCCTCAAAACTTACCAAACATAAGAAAATTCATACTGGAGAGAAACCCTACACATGT GAAGAATGTGGCAAAGCCTTTAACCAGTCCTCAAACCTTACTAAACATAAGAGAATTCAT ACTGGAGAAAAACCTTACAAATGTGAAGAATGTGACAAAGCTTTTAAATGGTCCTCAGTC CTTACTAAACATAAGATAATTCATACCGGAGAAAAATTACAAATA
Cloned ORF protein sequence for pF1KB7812 Download>KIBB7812 595 aa MGPLTFRDVAIEFSLKEWQCLDTAQRNLYRNVMLENYRNLVFLGITVSKPDLITCLEQGK EAWSMKRHEIMVAKPTVMCSHFARDLWPEQNIKDSFQKVTLKRYGKCRHENLPLIKGCES MDECKMHKGGCNGLNQCLTATQSKIFQCDKYVKVAHKFSNSNRHEIRHTKKKPFKCRKCG KSFRMISCLTEHSRIHTRVNFYKCEECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFN QSSNLIKHKKIHTGEKPYKCEECGKTFNRSSTLTTHKIIHTGEKPYKCKECGKAFNRSST LTTHRKIHTGEKPYKCEECGKAFKQSSNLTTHKIIHTGEKPYKCKKCGKAFNQSAHLTTH EVIHTGEKPYKCEKCGKAFNHFSHLTTHKIIHTGEKPYKCKECGKAFKHSSTLTKHKIIH TGEKPYKCKECEKAFNQSSKLTEHKKIHTGEKPYECEKCGKAFNQSSNLTRHKKSHTEEK PYKCEECGKGFKWPSTLTIHKIIHTGEKPYKCEECGKAFNQSSKLTKHKKIHTGEKPYTC EECGKAFNQSSNLTKHKRIHTGEKPYKCEECDKAFKWSSVLTKHKIIHTGEKLQI
Nucleotide Sequence (with vector) for pF1KB7812 Download>pF1KB7812 4898 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGACCATTG ACATTTAGGGATGTGGCCATAGAATTCTCTCTGAAGGAGTGGCAATGCCTGGACACTGCA CAGCGGAATTTATATAGAAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGT ATTACTGTTTCTAAGCCAGACCTGATCACTTGTCTGGAGCAAGGGAAAGAGGCCTGGAGT ATGAAGAGACATGAGATCATGGTGGCCAAACCCACAGTTATGTGTTCTCATTTTGCCCGA GACCTTTGGCCGGAGCAGAATATAAAAGATTCTTTCCAAAAAGTGACACTGAAAAGATAT GGAAAATGTAGACATGAAAATTTACCATTAATAAAAGGCTGTGAAAGTATGGATGAGTGT AAGATGCACAAAGGAGGTTGTAATGGACTTAACCAATGTCTCACAGCTACCCAGAGCAAA ATATTTCAATGTGATAAATATGTAAAAGTCGCTCATAAATTTTCAAATTCAAACAGACAT GAGATAAGACATACTAAAAAGAAACCTTTCAAATGTAGAAAATGTGGCAAATCATTTCGC ATGATTTCATGCCTAACTGAACATAGCAGAATTCATACTAGAGTAAATTTCTACAAATGT GAAGAATGTGGAAAAGCCTTTAACTGGTCCTCAACCCTTACTAAACATAAGAGAATTCAT ACGGGAGAGAAACCTTACAAATGTGAAGAATGTGGTAAAGCCTTTAACCAGTCCTCAAAC CTTATTAAACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGC AAAACTTTTAACCGATCCTCAACTCTTACTACCCATAAGATAATTCATACTGGAGAGAAA CCCTACAAATGTAAAGAATGTGGTAAAGCTTTTAACCGTTCTTCAACCCTTACTACCCAT AGAAAAATTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGGCAAAGCCTTTAAG CAGTCCTCAAACCTTACTACACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGT AAAAAATGTGGAAAAGCCTTTAACCAGTCTGCACACCTTACTACACATGAGGTAATTCAT ACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGAAAAGCCTTTAATCATTTCTCACAC CTTACTACACATAAGATAATTCATACTGGAGAGAAACCTTACAAATGTAAAGAATGTGGT AAAGCTTTTAAACACTCTTCAACCCTTACTAAACATAAGATAATTCATACTGGAGAGAAG CCTTACAAATGTAAAGAATGTGAAAAAGCTTTTAACCAATCCTCAAAACTTACTGAACAT AAGAAAATTCATACTGGAGAGAAACCCTATGAATGTGAAAAATGTGGCAAAGCTTTTAAC CAGTCCTCAAATCTTACTAGACATAAGAAAAGTCATACTGAAGAGAAACCTTACAAATGT GAAGAATGTGGCAAAGGTTTTAAATGGCCCTCAACCCTTACTATCCATAAGATAATTCAT ACTGGAGAGAAACCATACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAATCCTCAAAA CTTACCAAACATAAGAAAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGC AAAGCCTTTAACCAGTCCTCAAACCTTACTAAACATAAGAGAATTCATACTGGAGAAAAA CCTTACAAATGTGAAGAATGTGACAAAGCTTTTAAATGGTCCTCAGTCCTTACTAAACAT AAGATAATTCATACCGGAGAAAAATTACAAATAGTTTAAACGAATTCGAGCTCGGTACCC GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
more Linker info
