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SpecieshumanProduct IDFXC02297Cloning SiteSgfI-PmeIGeneKIBB7172SymbolKCNS3
Alias : KV9.3Descriptionpotassium voltage-gated channel, modifier subfamily S, member 3, transcript variant 1Original Clone IDcp01177
Length: 1473 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 491 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS1692.1 4.9e-200 99.8 KCNS3 CCDS6279.1 6.4e-101 56.4 KCNS2 CCDS6447.1 8.1e-58 42.5 KCNV2 CCDS10945.1 1.1e-54 39.1 KCNG4 CCDS13436.1 1.4e-54 38.0 KCNG1
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR003971 20 32 PR01494 Potassium channel IPR003971 35 51 PR01494 Potassium channel IPR003971 58 71 PR01494 Potassium channel IPR003091 66 85 PR00169 Voltage-dependent potassium channel IPR003968 66 76 PR01491 Potassium channel IPR003971 82 97 PR01494 Potassium channel IPR003971 105 117 PR01494 Potassium channel IPR003091 178 206 PR00169 Voltage-dependent potassium channel IPR003971 191 203 PR01494 Potassium channel IPR003091 224 247 PR00169 Voltage-dependent potassium channel IPR003091 250 270 PR00169 Voltage-dependent potassium channel IPR003091 294 320 PR00169 Voltage-dependent potassium channel IPR003968 299 307 PR01491 Potassium channel IPR003091 323 346 PR00169 Voltage-dependent potassium channel IPR003968 323 337 PR01491 Potassium channel IPR003091 354 376 PR00169 Voltage-dependent potassium channel IPR003091 383 409 PR00169 Voltage-dependent potassium channel IPR003971 393 411 PR01494 Potassium channel IPR003968 394 405 PR01491 Potassium channel HMMPfam IPR003131 17 116 PF02214 Potassium channel IPR005821 225 405 PF00520 Ion transport HMMSmart IPR000210 15 124 SM00225 BTB/POZ-like
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 183 SAKLIAISSLSVVLASIVAMCVH 205 PRIMARY 23 2 221 VLEGVEIACIAWFTGELAVRLAA 243 SECONDARY 23 3 323 EVGLLLLFLSVGISIFSVLIYSV 345 PRIMARY 23 4 352 SSLTSIPICWWWATISMTTVGY 373 SECONDARY 22 5 384 KLIASTCIICGILVVALPITIIF 406 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016859548 491 603888 99.8 100.0 XP_011531127 491 603888 99.8 100.0 NP_002243 491 603888 99.8 100.0 NP_001269357 491 603888 99.8 100.0 NP_065748 477 602906 56.4 91.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB7172 Download>KIBB7172 1473 bp ATGGTGTTTGGTGAGTTTTTCCATCGCCCTGGACAAGACGAGGAACTTGTCAACCTGAAT GTGGGGGGCTTTAAGCAGTCTGTTGACCAAAGCACCCTCCTGCGGTTTCCTCACACCAGA CTGGGGAAGCTGCTTACTTGCCATTCTGAAGAGGCCATTCTGGAGCTGTGTGATGATTAC AGTGTGGCCGATAAGGAATACTACTTTGATCGGAATCCCTCCTTGTTCAGATATGTTTTG AATTTTTATTACACGGGGAAGCTGCATGTCATGGAGGAGCTGTGCGTATTCTCATTCTGT CAGGAGATCGAGTACTGGGGCATCAACGAGCTCTTCATTGATTCTTGCTGCAGCAATCGC TACCAGGAACGCAAGGAGGAAAACCACGAGAAGGACTGGGACCAGAAAAGCCATGATGTG AGTACCGACTCCTCGTTTGAAGAGTCGTCTCTGTTTGAGAAAGAGCTGGAGAAGTTTGAC ACACTGCGATTTGGTCAGCTCCGGAAGAAAATCTGGATTAGAATGGAGAATCCAGCGTAC TGCCTGTCCGCTAAGCTTATCGCTATCTCCTCCTTGAGCGTGGTGCTGGCCTCCATCGTG GCCATGTGCGTTCACAGCATGTCGGAGTTCCAGAATGAGGATGGAGAAGTGGATGATCCG GTGCTGGAAGGAGTGGAGATCGCGTGCATTGCCTGGTTCACCGGGGAGCTTGCCGTCCGG CTGGCTGCCGCTCCTTGTCAAAAGAAATTCTGGAAAAACCCTCTGAACATCATTGACTTT GTCTCTATTATTCCCTTCTATGCCACGTTGGCTGTAGACACCAAGGAGGAAGAGAGTGAG GATATTGAGAACATGGGCAAGGTGGTCCAGATCCTACGGCTTATGAGGATTTTCCGAATT CTAAAGCTTGCCCGGCACTCGGTAGGACTTCGGTCTCTAGGTGCCACACTGAGACACAGC TACCATGAAGTTGGGCTTCTGCTTCTCTTCCTCTCCGTGGGCATTTCCATTTTCTCTGTG CTTATCTACTCCGTGGAGAAAGATGACCACACATCCAGCCTCACCAGCATCCCCATCTGC TGGTGGTGGGCCACCATCAGCATGACAACTGTGGGCTATGGAGACACCCACCCGGTCACC TTGGCGGGAAAGCTCATCGCCAGCACATGCATCATCTGTGGCATCTTGGTGGTGGCCCTT CCCATCACCATCATCTTCAACAAGTTTTCCAAGTACTACCAGAAGCAAAAGGACATTGAT GTGGACCAGTGCAGTGAGGATGCACCAGAGAAGTGTCATGAGCTACCTTACTTTAACATT AGGGATATATATGCACAGCGGATGCACGCCTTCATTACCAGTCTCTCTTCTGTAGGCATT GTGGTGAGCGATCCTGACTCCACAGATGCTTCAAGCATTGAAGACAATGAGGACATTTGT AACACCACCTCCTTGGAGAATTGCACAGCAAAA
Cloned ORF protein sequence for pF1KB7172 Download>KIBB7172 491 aa MVFGEFFHRPGQDEELVNLNVGGFKQSVDQSTLLRFPHTRLGKLLTCHSEEAILELCDDY SVADKEYYFDRNPSLFRYVLNFYYTGKLHVMEELCVFSFCQEIEYWGINELFIDSCCSNR YQERKEENHEKDWDQKSHDVSTDSSFEESSLFEKELEKFDTLRFGQLRKKIWIRMENPAY CLSAKLIAISSLSVVLASIVAMCVHSMSEFQNEDGEVDDPVLEGVEIACIAWFTGELAVR LAAAPCQKKFWKNPLNIIDFVSIIPFYATLAVDTKEEESEDIENMGKVVQILRLMRIFRI LKLARHSVGLRSLGATLRHSYHEVGLLLLFLSVGISIFSVLIYSVEKDDHTSSLTSIPIC WWWATISMTTVGYGDTHPVTLAGKLIASTCIICGILVVALPITIIFNKFSKYYQKQKDID VDQCSEDAPEKCHELPYFNIRDIYAQRMHAFITSLSSVGIVVSDPDSTDASSIEDNEDIC NTTSLENCTAK
Nucleotide Sequence (with vector) for pF1KB7172 Download>pF1KB7172 4586 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTGTTTGGT GAGTTTTTCCATCGCCCTGGACAAGACGAGGAACTTGTCAACCTGAATGTGGGGGGCTTT AAGCAGTCTGTTGACCAAAGCACCCTCCTGCGGTTTCCTCACACCAGACTGGGGAAGCTG CTTACTTGCCATTCTGAAGAGGCCATTCTGGAGCTGTGTGATGATTACAGTGTGGCCGAT AAGGAATACTACTTTGATCGGAATCCCTCCTTGTTCAGATATGTTTTGAATTTTTATTAC ACGGGGAAGCTGCATGTCATGGAGGAGCTGTGCGTATTCTCATTCTGTCAGGAGATCGAG TACTGGGGCATCAACGAGCTCTTCATTGATTCTTGCTGCAGCAATCGCTACCAGGAACGC AAGGAGGAAAACCACGAGAAGGACTGGGACCAGAAAAGCCATGATGTGAGTACCGACTCC TCGTTTGAAGAGTCGTCTCTGTTTGAGAAAGAGCTGGAGAAGTTTGACACACTGCGATTT GGTCAGCTCCGGAAGAAAATCTGGATTAGAATGGAGAATCCAGCGTACTGCCTGTCCGCT AAGCTTATCGCTATCTCCTCCTTGAGCGTGGTGCTGGCCTCCATCGTGGCCATGTGCGTT CACAGCATGTCGGAGTTCCAGAATGAGGATGGAGAAGTGGATGATCCGGTGCTGGAAGGA GTGGAGATCGCGTGCATTGCCTGGTTCACCGGGGAGCTTGCCGTCCGGCTGGCTGCCGCT CCTTGTCAAAAGAAATTCTGGAAAAACCCTCTGAACATCATTGACTTTGTCTCTATTATT CCCTTCTATGCCACGTTGGCTGTAGACACCAAGGAGGAAGAGAGTGAGGATATTGAGAAC ATGGGCAAGGTGGTCCAGATCCTACGGCTTATGAGGATTTTCCGAATTCTAAAGCTTGCC CGGCACTCGGTAGGACTTCGGTCTCTAGGTGCCACACTGAGACACAGCTACCATGAAGTT GGGCTTCTGCTTCTCTTCCTCTCCGTGGGCATTTCCATTTTCTCTGTGCTTATCTACTCC GTGGAGAAAGATGACCACACATCCAGCCTCACCAGCATCCCCATCTGCTGGTGGTGGGCC ACCATCAGCATGACAACTGTGGGCTATGGAGACACCCACCCGGTCACCTTGGCGGGAAAG CTCATCGCCAGCACATGCATCATCTGTGGCATCTTGGTGGTGGCCCTTCCCATCACCATC ATCTTCAACAAGTTTTCCAAGTACTACCAGAAGCAAAAGGACATTGATGTGGACCAGTGC AGTGAGGATGCACCAGAGAAGTGTCATGAGCTACCTTACTTTAACATTAGGGATATATAT GCACAGCGGATGCACGCCTTCATTACCAGTCTCTCTTCTGTAGGCATTGTGGTGAGCGAT CCTGACTCCACAGATGCTTCAAGCATTGAAGACAATGAGGACATTTGTAACACCACCTCC TTGGAGAATTGCACAGCAAAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA ATACATTCAAATATGTATCCGCTCAT
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