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SpecieshumanProduct IDFXC01746Cloning SiteSgfI-PmeIGeneKIBB3788SymbolRBAK
Alias : ZNF769DescriptionRB-associated KRAB zinc finger, transcript variant 1Original Clone IDhh13850
Length: 2142 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 714 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS5337.1 5.1e-161 100.0 RBAK CCDS47538.1 1.4e-101 67.4 ZNF12 CCDS47539.1 3.1e-83 65.8 ZNF12 CCDS33480.1 1.9e-66 47.3 ZNF334 CCDS74736.1 3.7e-66 47.2 ZNF334
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 8 48 PF01352 Krueppel-associated box IPR007087 289 311 PF00096 Zinc finger IPR007087 373 395 PF00096 Zinc finger IPR007087 401 423 PF00096 Zinc finger IPR007087 429 451 PF00096 Zinc finger IPR007087 567 589 PF00096 Zinc finger IPR007087 623 645 PF00096 Zinc finger IPR007087 651 673 PF00096 Zinc finger HMMSmart IPR001909 8 68 SM00349 Krueppel-associated box IPR015880 261 283 SM00355 Zinc finger IPR015880 289 311 SM00355 Zinc finger IPR015880 317 339 SM00355 Zinc finger IPR015880 345 367 SM00355 Zinc finger IPR015880 373 395 SM00355 Zinc finger IPR015880 401 423 SM00355 Zinc finger IPR015880 429 451 SM00355 Zinc finger IPR015880 457 479 SM00355 Zinc finger IPR015880 485 505 SM00355 Zinc finger IPR015880 511 531 SM00355 Zinc finger IPR015880 539 561 SM00355 Zinc finger IPR015880 567 589 SM00355 Zinc finger IPR015880 595 617 SM00355 Zinc finger IPR015880 623 645 SM00355 Zinc finger IPR015880 651 673 SM00355 Zinc finger IPR015880 679 701 SM00355 Zinc finger ProfileScan IPR001909 8 79 PS50805 Krueppel-associated box IPR007087 261 288 PS50157 Zinc finger IPR007087 289 316 PS50157 Zinc finger IPR007087 317 344 PS50157 Zinc finger IPR007087 345 372 PS50157 Zinc finger IPR007087 373 400 PS50157 Zinc finger IPR007087 401 428 PS50157 Zinc finger IPR007087 429 456 PS50157 Zinc finger IPR007087 457 484 PS50157 Zinc finger IPR007087 511 538 PS50157 Zinc finger IPR007087 539 566 PS50157 Zinc finger IPR007087 567 594 PS50157 Zinc finger IPR007087 595 622 PS50157 Zinc finger IPR007087 623 650 PS50157 Zinc finger IPR007087 651 678 PS50157 Zinc finger IPR007087 679 706 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_066986 714 608191 100.0 100.0 NP_001191385 714 608191 100.0 100.0 NP_057349 697 194536 67.4 100.0 NP_008887 659 194536 65.8 100.0 NP_001305822 675 602277 44.1 91.7 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB3788 Download>KIBB3788 2142 bp ATGAACACATTGCAGGGGCCAGTGTCATTCAAAGATGTGGCTGTGGATTTCACCCAGGAG GAGTGGCAGCAGCTGGACCCTGATGAGAAGATAACTTACAGGGATGTGATGTTGGAGAAC TATAGCCATCTAGTTTCTGTGGGATATGATACCACCAAGCCAAACGTCATCATTAAGTTG GAGCAGGGAGAGGAGCCGTGGATAATGGGAGGTGAATTTCCATGTCAACATAGTCCAGAA GCCTGGAGAGTTGATGACCTGATAGAGAGAATCCAAGAAAACGAAGACAAACATTCAAGG CAAGCTGCTTGTATCAATAGCAAAACCCTGACTGAAGAGAAAGAGAATACATTTAGTCAA ATTTACATGGAAACAAGCCTTGTTCCTTCAAGCATAATAGCTCATAATTGTGTCTCATGT GGAAAGAATTTAGAATCTATTTCGCAATTAATTAGTAGTGATGGAAGCTATGCTAGGACA AAACCTGATGAGTGTAATGAATGTGGGAAAACATATCATGGAGAGAAAATGTGTGAATTT AATCAAAATGGGGATACCTATTCTCACAATGAAGAAAATATTCTTCAGAAAATTAGTATT TTGGAGAAACCCTTTGAATATAATGAATGCATGGAAGCCTTAGACAATGAGGCTGTTTTT ATTGCTCATAAGAGAGCTTACATAGGGGAGAAGCCCTATGAGTGGAATGATTCTGGACCA GACTTCATACAGATGTCAAATTTTAATGCATATCAGAGATCACAAATGGAAATGAAGCCC TTTGAATGCAGTGAATGTGGAAAATCCTTCTGTAAAAAGTCAAAATTCATCATCCACCAG AGGGCTCACACAGGAGAGAAACCTTATGAATGTAATGTATGTGGGAAATCCTTCAGCCAA AAGGGAACCCTCACTGTACATCGGAGATCACACTTAGAGGAGAAGCCCTATAAATGTAAT GAATGTGGGAAAACCTTTTGTCAGAAGTTACACCTCACTCAACACCTAAGAACTCATTCA GGAGAGAAACCCTACGAATGTAGCGAATGTGGGAAAACCTTCTGCCAAAAGACACATCTC ACCCTGCACCAGAGGAATCATTCAGGAGAGAGGCCCTATCCATGTAACGAATGTGGGAAA TCCTTCTCCCGCAAGTCTGCTCTCAGTGACCATCAGAGAACTCACACAGGAGAGAAGCTT TATAAATGTAATGAATGTGGGAAATCCTACTACCGAAAGTCTACTCTGATTACACATCAG AGAACACACACAGGAGAGAAGCCCTATCAGTGTAGCGAGTGTGGGAAATTCTTTTCTCGG GTGTCATACCTCACTATACATTATAGAAGTCATTTAGAAGAGAAACCCTATGAATGTAAT GAATGTGGCAAAACCTTCAATTTAAATTCAGCCTTCATTAGACATCGGAAAGTACACACA GAAGAGAAATCCCATGAATGTAGTGAATGTGGAAAGTTCTCTCAGTTGTATCTCACCGAC CATCATACAGCTCATTTAGAAGAGAAACCCTATGAATGTAATGAATGTGGGAAAACCTTC CTTGTAAATTCAGCCTTCGATGGGCACCAGCCACTTCCAAAAGGGGAGAAATCCTATGAA TGTAATGTATGTGGAAAGTTATTCAATGAGTTGTCATACTATACTGAACATTATAGAAGT CATTCAGAAGAGAAACCTTATGGATGTAGCGAATGTGGGAAAACCTTTTCCCATAATTCA TCCCTCTTCAGACATCAAAGAGTACACACAGGCGAGAAACCCTATGAATGTTACGAATGT GGAAAATTCTTCTCTCAGAAATCATATCTCACTATACATCATCGAATTCATTCAGGAGAG AAACCCTATGAATGTAGTAAATGTGGAAAAGTCTTCTCTCGGATGTCAAACCTCACTGTC CACTACAGAAGCCATTCAGGAGAGAAACCCTATGAATGTAATGAATGTGGGAAAGTCTTT TCTCAGAAGTCATACCTCACTGTACACTATAGAACTCATTCAGGAGAGAAACCCTATGAA TGTAATGAGTGTGGGAAAAAATTCCACCACAGATCAGCCTTCAATAGCCATCAGAGAATT CATAGAAGAGGAAATATGAATGTACTTGATGTGGAAAATCTC
Cloned ORF protein sequence for pF1KB3788 Download>KIBB3788 714 aa MNTLQGPVSFKDVAVDFTQEEWQQLDPDEKITYRDVMLENYSHLVSVGYDTTKPNVIIKL EQGEEPWIMGGEFPCQHSPEAWRVDDLIERIQENEDKHSRQAACINSKTLTEEKENTFSQ IYMETSLVPSSIIAHNCVSCGKNLESISQLISSDGSYARTKPDECNECGKTYHGEKMCEF NQNGDTYSHNEENILQKISILEKPFEYNECMEALDNEAVFIAHKRAYIGEKPYEWNDSGP DFIQMSNFNAYQRSQMEMKPFECSECGKSFCKKSKFIIHQRAHTGEKPYECNVCGKSFSQ KGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGEKPYECSECGKTFCQKTHL TLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGEKLYKCNECGKSYYRKSTLITHQ RTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECNECGKTFNLNSAFIRHRKVHT EEKSHECSECGKFSQLYLTDHHTAHLEEKPYECNECGKTFLVNSAFDGHQPLPKGEKSYE CNVCGKLFNELSYYTEHYRSHSEEKPYGCSECGKTFSHNSSLFRHQRVHTGEKPYECYEC GKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVF SQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHRRGNMNVLDVENL
Nucleotide Sequence (with vector) for pF1KB3788 Download>pF1KB3788 5255 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAACACATTG CAGGGGCCAGTGTCATTCAAAGATGTGGCTGTGGATTTCACCCAGGAGGAGTGGCAGCAG CTGGACCCTGATGAGAAGATAACTTACAGGGATGTGATGTTGGAGAACTATAGCCATCTA GTTTCTGTGGGATATGATACCACCAAGCCAAACGTCATCATTAAGTTGGAGCAGGGAGAG GAGCCGTGGATAATGGGAGGTGAATTTCCATGTCAACATAGTCCAGAAGCCTGGAGAGTT GATGACCTGATAGAGAGAATCCAAGAAAACGAAGACAAACATTCAAGGCAAGCTGCTTGT ATCAATAGCAAAACCCTGACTGAAGAGAAAGAGAATACATTTAGTCAAATTTACATGGAA ACAAGCCTTGTTCCTTCAAGCATAATAGCTCATAATTGTGTCTCATGTGGAAAGAATTTA GAATCTATTTCGCAATTAATTAGTAGTGATGGAAGCTATGCTAGGACAAAACCTGATGAG TGTAATGAATGTGGGAAAACATATCATGGAGAGAAAATGTGTGAATTTAATCAAAATGGG GATACCTATTCTCACAATGAAGAAAATATTCTTCAGAAAATTAGTATTTTGGAGAAACCC TTTGAATATAATGAATGCATGGAAGCCTTAGACAATGAGGCTGTTTTTATTGCTCATAAG AGAGCTTACATAGGGGAGAAGCCCTATGAGTGGAATGATTCTGGACCAGACTTCATACAG ATGTCAAATTTTAATGCATATCAGAGATCACAAATGGAAATGAAGCCCTTTGAATGCAGT GAATGTGGAAAATCCTTCTGTAAAAAGTCAAAATTCATCATCCACCAGAGGGCTCACACA GGAGAGAAACCTTATGAATGTAATGTATGTGGGAAATCCTTCAGCCAAAAGGGAACCCTC ACTGTACATCGGAGATCACACTTAGAGGAGAAGCCCTATAAATGTAATGAATGTGGGAAA ACCTTTTGTCAGAAGTTACACCTCACTCAACACCTAAGAACTCATTCAGGAGAGAAACCC TACGAATGTAGCGAATGTGGGAAAACCTTCTGCCAAAAGACACATCTCACCCTGCACCAG AGGAATCATTCAGGAGAGAGGCCCTATCCATGTAACGAATGTGGGAAATCCTTCTCCCGC AAGTCTGCTCTCAGTGACCATCAGAGAACTCACACAGGAGAGAAGCTTTATAAATGTAAT GAATGTGGGAAATCCTACTACCGAAAGTCTACTCTGATTACACATCAGAGAACACACACA GGAGAGAAGCCCTATCAGTGTAGCGAGTGTGGGAAATTCTTTTCTCGGGTGTCATACCTC ACTATACATTATAGAAGTCATTTAGAAGAGAAACCCTATGAATGTAATGAATGTGGCAAA ACCTTCAATTTAAATTCAGCCTTCATTAGACATCGGAAAGTACACACAGAAGAGAAATCC CATGAATGTAGTGAATGTGGAAAGTTCTCTCAGTTGTATCTCACCGACCATCATACAGCT CATTTAGAAGAGAAACCCTATGAATGTAATGAATGTGGGAAAACCTTCCTTGTAAATTCA GCCTTCGATGGGCACCAGCCACTTCCAAAAGGGGAGAAATCCTATGAATGTAATGTATGT GGAAAGTTATTCAATGAGTTGTCATACTATACTGAACATTATAGAAGTCATTCAGAAGAG AAACCTTATGGATGTAGCGAATGTGGGAAAACCTTTTCCCATAATTCATCCCTCTTCAGA CATCAAAGAGTACACACAGGCGAGAAACCCTATGAATGTTACGAATGTGGAAAATTCTTC TCTCAGAAATCATATCTCACTATACATCATCGAATTCATTCAGGAGAGAAACCCTATGAA TGTAGTAAATGTGGAAAAGTCTTCTCTCGGATGTCAAACCTCACTGTCCACTACAGAAGC CATTCAGGAGAGAAACCCTATGAATGTAATGAATGTGGGAAAGTCTTTTCTCAGAAGTCA TACCTCACTGTACACTATAGAACTCATTCAGGAGAGAAACCCTATGAATGTAATGAGTGT GGGAAAAAATTCCACCACAGATCAGCCTTCAATAGCCATCAGAGAATTCATAGAAGAGGA AATATGAATGTACTTGATGTGGAAAATCTCGTTTAAACGAATTCGAGCTCGGTACCCGGG GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGAT CTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTT CCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCT GCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCC GGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACC AAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACC GCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTC GTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTG AACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATA CCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTA TCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGC CTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTG ATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTT CCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGT GGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGG ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA TTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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