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SpecieshumanProduct IDFXC22740Cloning SiteSgfI-PmeIGenBank AccessionGeneKIEE3561SymbolGPRC6A
Alias : GPCR, bA86F4.3DescriptionG protein-coupled receptor, class C, group 6, member A, transcript variant 1Original Clone IDoc93561
Length: 2778 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 926 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS5112.1 0 99.9 GPRC6A CCDS69185.1 1.6e-186 81.0 GPRC6A CCDS69184.1 1.6e-168 92.2 GPRC6A CCDS3010.1 1.4e-37 33.1 CASR CCDS54632.1 1.4e-37 33.1 CASR
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR000337 33 45 PR00248 GPCR IPR000337 84 103 PR00248 GPCR IPR000068 132 145 PR00592 GPCR IPR000337 143 169 PR00248 GPCR IPR000337 176 195 PR00248 GPCR IPR000337 195 211 PR00248 GPCR IPR000337 211 228 PR00248 GPCR IPR000068 217 238 PR00592 GPCR IPR000068 319 337 PR00592 GPCR IPR000068 550 564 PR00592 GPCR IPR000337 622 644 PR00248 GPCR IPR000337 667 688 PR00248 GPCR IPR000337 704 727 PR00248 GPCR IPR000337 779 800 PR00248 GPCR HMMPfam IPR001828 75 479 PF01094 Extracellular ligand-binding receptor IPR011500 519 571 PF07562 GPCR IPR017978 603 837 PF00003 GPCR ProfileScan IPR017978 593 847 PS50259 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MAFLIILITCFVIILATSQ 19 PRIMARY 19 2 29 AATSPGHIIIGGLFAIHEKMLSS 51 SECONDARY 23 3 592 SLAILLLILSLLGIIFVLVVGII 614 PRIMARY 23 4 629 GLRVCYVILLCHFLNFASTSFFI 651 PRIMARY 23 5 666 FGVSFTLCISCILTKSLKILLAF 688 SECONDARY 23 6 702 YRPILIIFTCTGIQVVICTLWLI 724 PRIMARY 23 7 749 ILAFGTMLGYIAILAFICFIFA 770 PRIMARY 22 8 782 KFITFGMLIYFIAWITFIPIYAT 804 PRIMARY 23 9 809 YVPAVEIIVILISNYGILYCTFI 831 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_683766 926 613572 99.9 100.0 XP_016865964 879 613572 99.9 94.9 NP_001273283 751 613572 81.0 100.0 NP_001273284 855 613572 92.2 100.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KE3561 Download>KIEE3561 2778 bp ATGGCATTCTTAATTATACTAATTACCTGCTTTGTGATTATTCTTGCTACTTCACAGCCT TGCCAGACCCCTGATGACTTTGTGGCTGCCACTTCTCCGGGACATATCATAATTGGAGGT TTGTTTGCTATTCATGAAAAAATGTTGTCCTCAGAAGACTCTCCCAGACGACCACAAATC CAGGAGTGTGTTGGCTTTGAAATATCAGTTTTTCTTCAAACTCTTGCCATGATACACAGC ATTGAGATGATCAACAATTCAACACTCTTATCTGGAGTCAAACTGGGGTATGAAATCTAT GACACTTGTACAGAAGTCACAGTGGCAATGGCAGCCACTCTGAGGTTTCTTTCTAAATTC AACTGCTCCAGAGAAACTGTGGAGTTTAAGTGTGACTATTCCAGCTACATGCCAAGAGTT AAGGCTGTCATAGGTTCTGGGTACTCAGAAATAACTATGGCTGTCTCCAGGATGTTGAAT TTACAGCTCATGCCACAGGTGGGTTATGAATCAACTGCAGAAATCCTGAGTGACAAAATT CGCTTTCCTTCATTTTTACGGACTGTGCCCAGTGACTTCCATCAAATTAAAGCAATGGCT CACCTGATTCAGAAATCTGGTTGGAACTGGATTGGCATCATAACCACAGATGATGACTAT GGACGATTGGCTCTTAACACTTTTATAATTCAGGCTGAAGCAAATAACGTGTGCATAGCC TTCAAAGAGGTTCTTCCAGCCTTTCTTTCAGATAATACCATTGAAGTCAGAATCAATCGG ACACTGAAGAAAATCATTTTAGAAGCCCAGGTTAATGTCATTGTGGTATTTCTGAGGCAA TTCCATGTTTTTGATCTCTTCAATAAAGCCATTGAAATGAATATAAATAAGATGTGGATT GCTAGTGATAATTGGTCAACTGCCACCAAGATTACCACCATTCCTAATGTTAAAAAGATT GGCAAAGTTGTAGGGTTTGCCTTTAGAAGAGGGAATATATCCTCTTTCCATTCCTTTCTT CAAAATCTGCACTTGCTTCCCAGTGACAGTCACAAACTCTTACATGAATATGCCATGCAT TTATCTGCCTGCGCATATGTCAAGGACACTGATTTGAGTCAATGCATATTCAATCATTCT CAAAGGACTTTGGCCTACAAGGCTAACAAGGCTATAGAAAGGAACTTCGTCATGAGAAAT GACTTCCTCTGGGACTATGCTGAGCCAGGACTCATTCATAGTATTCAGCTTGCAGTGTTT GCCCTTGGTTATGCCATTCGGGATCTGTGTCAAGCTCGTGACTGTCAGAACCCCAACGCC TTTCAACCATGGGAGTTACTTGGTGTGCTAAAAAATGTGACATTCACTGATGGATGGAAT TCATTTCATTTTGATGCTCATGGGGATTTAAATACTGGATATGATGTTGTGCTCTGGAAG GAGATCAATGGACACATGACTGTCACTAAGATGGCAGAATATGACCTACAGAATGATGTC TTCATCATCCCAGATCAGGAAACAAAAAATGAGTTCAGGAATCTTAAGCAAATTCAATCT AAATGCTCCAAGGAATGCAGTCCTGGGCAAATGAAGAAAACTACAAGAAGTCAACACATC TGTTGCTATGAATGTCAGAACTGTCCTGAAAATCATTACACTAATCAGACAGATATGCCT CACTGCCTTTTATGCAACAACAAAACTCACTGGGCCCCTGTTAGGAGCACTATGTGCTTT GAAAAGGAAGTGGAATATCTCAACTGGAATGACTCCTTGGCCATCCTACTCCTGATTCTC TCCCTACTGGGAATCATATTTGTTCTGGTTGTTGGCATAATATTTACAAGAAACCTGAAC ACACCTGTTGTGAAATCATCCGGGGGATTAAGAGTCTGCTATGTGATCCTTCTCTGTCAT TTCCTCAATTTTGCCAGCACGAGCTTTTTCATTGGAGAACCACAAGACTTCACATGTAAA ACCAGGCAGACAATGTTTGGAGTGAGCTTTACTCTTTGCATCTCCTGCATTTTGACGAAG TCTCTGAAAATTTTGCTAGCTTTCAGCTTTGATCCCAAATTACAGAAATTTCTGAAGTGC CTCTATAGACCGATCCTTATTATCTTCACTTGCACGGGCATCCAGGTTGTCATTTGCACA CTCTGGCTAATCTTTGCAGCACCTACTGTAGAGGTGAATGTCTCCTTGCCCAGAGTCATC ATCCTGGAGTGTGAGGAGGGATCCATACTTGCATTTGGCACCATGCTGGGCTACATTGCC ATCCTGGCCTTCATTTGCTTCATATTTGCTTTCAAAGGCAAATATGAGAATTACAATGAA GCCAAATTCATTACATTTGGCATGCTCATTTACTTCATAGCTTGGATCACATTCATCCCT ATCTATGCTACCACATTTGGCAAATATGTACCGGCTGTGGAGATTATTGTCATATTAATA TCTAACTATGGAATCCTGTATTGCACATTCATCCCCAAATGCTATGTTATTATTTGTAAG CAAGAGATTAACACAAAGTCTGCCTTTCTCAAGATGATCTACAGTTATTCTTCCCATAGT GTGAGCAGCATTGCCCTGAGTCCTGCTTCACTGGACTCCATGAGCGGCAATGTCACAATG ACCAATCCCAGCTCTAGTGGCAAGTCTGCAACCTGGCAGAAAAGCAAAGATCTTCAGGCA CAAGCATTTGCACACATATGCAGGGAAAATGCCACAAGTGTATCTAAAACTTTGCCTCGA AAAAGAATGTCAAGTATA
Cloned ORF protein sequence for pF1KE3561 Download>KIEE3561 926 aa MAFLIILITCFVIILATSQPCQTPDDFVAATSPGHIIIGGLFAIHEKMLSSEDSPRRPQI QECVGFEISVFLQTLAMIHSIEMINNSTLLSGVKLGYEIYDTCTEVTVAMAATLRFLSKF NCSRETVEFKCDYSSYMPRVKAVIGSGYSEITMAVSRMLNLQLMPQVGYESTAEILSDKI RFPSFLRTVPSDFHQIKAMAHLIQKSGWNWIGIITTDDDYGRLALNTFIIQAEANNVCIA FKEVLPAFLSDNTIEVRINRTLKKIILEAQVNVIVVFLRQFHVFDLFNKAIEMNINKMWI ASDNWSTATKITTIPNVKKIGKVVGFAFRRGNISSFHSFLQNLHLLPSDSHKLLHEYAMH LSACAYVKDTDLSQCIFNHSQRTLAYKANKAIERNFVMRNDFLWDYAEPGLIHSIQLAVF ALGYAIRDLCQARDCQNPNAFQPWELLGVLKNVTFTDGWNSFHFDAHGDLNTGYDVVLWK EINGHMTVTKMAEYDLQNDVFIIPDQETKNEFRNLKQIQSKCSKECSPGQMKKTTRSQHI CCYECQNCPENHYTNQTDMPHCLLCNNKTHWAPVRSTMCFEKEVEYLNWNDSLAILLLIL SLLGIIFVLVVGIIFTRNLNTPVVKSSGGLRVCYVILLCHFLNFASTSFFIGEPQDFTCK TRQTMFGVSFTLCISCILTKSLKILLAFSFDPKLQKFLKCLYRPILIIFTCTGIQVVICT LWLIFAAPTVEVNVSLPRVIILECEEGSILAFGTMLGYIAILAFICFIFAFKGKYENYNE AKFITFGMLIYFIAWITFIPIYATTFGKYVPAVEIIVILISNYGILYCTFIPKCYVIICK QEINTKSAFLKMIYSYSSHSVSSIALSPASLDSMSGNVTMTNPSSSGKSATWQKSKDLQA QAFAHICRENATSVSKTLPRKRMSSI
Nucleotide Sequence (with vector) for pF1KE3561 Download>pF1KE3561 5891 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCATTCTTA ATTATACTAATTACCTGCTTTGTGATTATTCTTGCTACTTCACAGCCTTGCCAGACCCCT GATGACTTTGTGGCTGCCACTTCTCCGGGACATATCATAATTGGAGGTTTGTTTGCTATT CATGAAAAAATGTTGTCCTCAGAAGACTCTCCCAGACGACCACAAATCCAGGAGTGTGTT GGCTTTGAAATATCAGTTTTTCTTCAAACTCTTGCCATGATACACAGCATTGAGATGATC AACAATTCAACACTCTTATCTGGAGTCAAACTGGGGTATGAAATCTATGACACTTGTACA GAAGTCACAGTGGCAATGGCAGCCACTCTGAGGTTTCTTTCTAAATTCAACTGCTCCAGA GAAACTGTGGAGTTTAAGTGTGACTATTCCAGCTACATGCCAAGAGTTAAGGCTGTCATA GGTTCTGGGTACTCAGAAATAACTATGGCTGTCTCCAGGATGTTGAATTTACAGCTCATG CCACAGGTGGGTTATGAATCAACTGCAGAAATCCTGAGTGACAAAATTCGCTTTCCTTCA TTTTTACGGACTGTGCCCAGTGACTTCCATCAAATTAAAGCAATGGCTCACCTGATTCAG AAATCTGGTTGGAACTGGATTGGCATCATAACCACAGATGATGACTATGGACGATTGGCT CTTAACACTTTTATAATTCAGGCTGAAGCAAATAACGTGTGCATAGCCTTCAAAGAGGTT CTTCCAGCCTTTCTTTCAGATAATACCATTGAAGTCAGAATCAATCGGACACTGAAGAAA ATCATTTTAGAAGCCCAGGTTAATGTCATTGTGGTATTTCTGAGGCAATTCCATGTTTTT GATCTCTTCAATAAAGCCATTGAAATGAATATAAATAAGATGTGGATTGCTAGTGATAAT TGGTCAACTGCCACCAAGATTACCACCATTCCTAATGTTAAAAAGATTGGCAAAGTTGTA GGGTTTGCCTTTAGAAGAGGGAATATATCCTCTTTCCATTCCTTTCTTCAAAATCTGCAC TTGCTTCCCAGTGACAGTCACAAACTCTTACATGAATATGCCATGCATTTATCTGCCTGC GCATATGTCAAGGACACTGATTTGAGTCAATGCATATTCAATCATTCTCAAAGGACTTTG GCCTACAAGGCTAACAAGGCTATAGAAAGGAACTTCGTCATGAGAAATGACTTCCTCTGG GACTATGCTGAGCCAGGACTCATTCATAGTATTCAGCTTGCAGTGTTTGCCCTTGGTTAT GCCATTCGGGATCTGTGTCAAGCTCGTGACTGTCAGAACCCCAACGCCTTTCAACCATGG GAGTTACTTGGTGTGCTAAAAAATGTGACATTCACTGATGGATGGAATTCATTTCATTTT GATGCTCATGGGGATTTAAATACTGGATATGATGTTGTGCTCTGGAAGGAGATCAATGGA CACATGACTGTCACTAAGATGGCAGAATATGACCTACAGAATGATGTCTTCATCATCCCA GATCAGGAAACAAAAAATGAGTTCAGGAATCTTAAGCAAATTCAATCTAAATGCTCCAAG GAATGCAGTCCTGGGCAAATGAAGAAAACTACAAGAAGTCAACACATCTGTTGCTATGAA TGTCAGAACTGTCCTGAAAATCATTACACTAATCAGACAGATATGCCTCACTGCCTTTTA TGCAACAACAAAACTCACTGGGCCCCTGTTAGGAGCACTATGTGCTTTGAAAAGGAAGTG GAATATCTCAACTGGAATGACTCCTTGGCCATCCTACTCCTGATTCTCTCCCTACTGGGA ATCATATTTGTTCTGGTTGTTGGCATAATATTTACAAGAAACCTGAACACACCTGTTGTG AAATCATCCGGGGGATTAAGAGTCTGCTATGTGATCCTTCTCTGTCATTTCCTCAATTTT GCCAGCACGAGCTTTTTCATTGGAGAACCACAAGACTTCACATGTAAAACCAGGCAGACA ATGTTTGGAGTGAGCTTTACTCTTTGCATCTCCTGCATTTTGACGAAGTCTCTGAAAATT TTGCTAGCTTTCAGCTTTGATCCCAAATTACAGAAATTTCTGAAGTGCCTCTATAGACCG ATCCTTATTATCTTCACTTGCACGGGCATCCAGGTTGTCATTTGCACACTCTGGCTAATC TTTGCAGCACCTACTGTAGAGGTGAATGTCTCCTTGCCCAGAGTCATCATCCTGGAGTGT GAGGAGGGATCCATACTTGCATTTGGCACCATGCTGGGCTACATTGCCATCCTGGCCTTC ATTTGCTTCATATTTGCTTTCAAAGGCAAATATGAGAATTACAATGAAGCCAAATTCATT ACATTTGGCATGCTCATTTACTTCATAGCTTGGATCACATTCATCCCTATCTATGCTACC ACATTTGGCAAATATGTACCGGCTGTGGAGATTATTGTCATATTAATATCTAACTATGGA ATCCTGTATTGCACATTCATCCCCAAATGCTATGTTATTATTTGTAAGCAAGAGATTAAC ACAAAGTCTGCCTTTCTCAAGATGATCTACAGTTATTCTTCCCATAGTGTGAGCAGCATT GCCCTGAGTCCTGCTTCACTGGACTCCATGAGCGGCAATGTCACAATGACCAATCCCAGC TCTAGTGGCAAGTCTGCAACCTGGCAGAAAAGCAAAGATCTTCAGGCACAAGCATTTGCA CACATATGCAGGGAAAATGCCACAAGTGTATCTAAAACTTTGCCTCGAAAAAGAATGTCA AGTATAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG TATCCGCTCAT
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