STOML1 ORF clone FXC11941

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Flexi ORF Clone FXC11941

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Clone info.

Species

human

Clone Name

pF1KB5185 Sequence (with vector) Restriction Map

Product ID

FXC11941

HaloTag Clone PID

FHC11941

ORF Sequence

DNA sequence (1194 bp)
Protein sequence (398 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587381]

Gene

KIBB5185

Symbol

STOML1

Alias : SLP-1, STORP, hUNC-24

Description

stomatin (EPB72)-like 1, transcript variant 1

Original Clone ID

cs03079

Features of the cloned ORF sequence

Description

Length: 1194 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 398 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10254.1 4.5e-138 100.0 STOML1 CCDS58382.1 1.8e-120 99.7 STOML1 CCDS58381.1 1.1e-103 99.7 STOML1 CCDS58385.1 1.2e-90 82.2 STOML1 CCDS58384.1 1.2e-88 87.4 STOML1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001972 84 106 PR00721 Stomatin IPR001972 131 152 PR00721 Stomatin IPR001972 166 183 PR00721 Stomatin IPR001972 186 209 PR00721 Stomatin HMMPfam IPR001107 80 222 PF01145 Band 7 protein IPR003033 300 394 PF02036 SCP2 sterol-binding domain HMMSmart IPR001107 77 242 SM00244 Band 7 protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 57 GLISFLGFLLLLVTFPISGWFAL 79 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004800 398 608326 100.0 100.0 NP_001243601 397 608326 99.7 100.0 NP_001311159 356 608326 100.0 88.9 XP_005254849 356 608326 100.0 88.9 XP_006720836 355 608326 99.7 88.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5185 Download

>KIBB5185  1194 bp
ATGCTCGGCAGGTCTGGGTACCGGGCGCTGCCCCTGGGTGATTTTGACCGCTTCCAGCAG
TCGAGCTTCGGCTTTCTGGGCTCGCAGAAGGGCTGCTTGTCCCCGGAGCGGGGCGGCGTG
GGGACAGGGGCCGATGTACCCCAGAGCTGGCCCTCCTGCCTCTGTCATGGCCTCATCAGT
TTCCTGGGGTTCTTGCTGCTGTTGGTCACCTTCCCCATTTCTGGCTGGTTTGCCCTGAAG
ATTGTGCCCACCTACGAGCGGATGATTGTGTTCCGCCTGGGCCGGATCCGCACCCCCCAG
GGACCTGGCATGGTTCTGCTCTTGCCCTTCATTGACTCCTTTCAGAGGGTGGATCTGAGG
ACACGAGCCTTCAACGTCCCTCCCTGCAAGCTGGCCTCTAAGGACGGGGCTGTGCTGTCC
GTGGGAGCCGATGTCCAGTTTCGCATCTGGGACCCGGTGCTGTCGGTGATGACTGTGAAA
GACCTGAACACAGCCACACGCATGACAGCCCAGAACGCCATGACCAAGGCCCTGCTCAAG
AGGCCGCTGCGGGAGATCCAGATGGAGAAGCTCAAGATCAGCGACCAGCTTCTGCTGGAG
ATCAACGATGTGACCAGGGCCTGGGGGCTGGAGGTAGACCGCGTGGAGCTGGCAGTGGAG
GCCGTGCTCCAGCCGCCCCAGGACAGCCCAGCTGGGCCCAACCTGGACAGCACCCTCCAG
CAGCTGGCCCTGCACTTCCTGGGAGGAAGCATGAACTCAATGGCAGGAGGTGCCCCGTCC
CCGGGGCCAGCAGACACCGTGGAGATGGTGAGTGAAGTTGAGCCACCTGCCCCTCAAGTT
GGTGCCAGGTCCAGTCCGAAGCAGCCTCTGGCGGAGGGGCTACTGACTGCTCTACAGCCC
TTCCTGTCTGAGGCCCTGGTCAGCCAAGTCGGGGCCTGCTACCAGTTCAATGTCGTCCTG
CCCAGCGGCACCCAAAGCGCCTACTTCCTGGACCTCACTACAGGACGAGGAAGAGTGGGA
CACGGGGTGCCTGATGGCATCCCTGATGTGGTGGTGGAGATGGCCGAGGCAGACCTGCGG
GCCCTGCTATGCAGAGAGCTGCGGCCCCTGGGGGCCTACATGAGTGGACGGCTGAAGGTG
AAGGGCGACCTGGCTATGGCCATGAAGCTGGAGGCTGTCCTCAGGGCCTTGAAG

ORF Protein

Cloned ORF protein sequence for pF1KB5185 Download

>KIBB5185  398 aa
MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLIS
FLGFLLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLR
TRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLK
RPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQDSPAGPNLDSTLQ
QLALHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTALQP
FLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLR
ALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5185 Download

>pF1KB5185  4307 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTCGGCAGG
TCTGGGTACCGGGCGCTGCCCCTGGGTGATTTTGACCGCTTCCAGCAGTCGAGCTTCGGC
TTTCTGGGCTCGCAGAAGGGCTGCTTGTCCCCGGAGCGGGGCGGCGTGGGGACAGGGGCC
GATGTACCCCAGAGCTGGCCCTCCTGCCTCTGTCATGGCCTCATCAGTTTCCTGGGGTTC
TTGCTGCTGTTGGTCACCTTCCCCATTTCTGGCTGGTTTGCCCTGAAGATTGTGCCCACC
TACGAGCGGATGATTGTGTTCCGCCTGGGCCGGATCCGCACCCCCCAGGGACCTGGCATG
GTTCTGCTCTTGCCCTTCATTGACTCCTTTCAGAGGGTGGATCTGAGGACACGAGCCTTC
AACGTCCCTCCCTGCAAGCTGGCCTCTAAGGACGGGGCTGTGCTGTCCGTGGGAGCCGAT
GTCCAGTTTCGCATCTGGGACCCGGTGCTGTCGGTGATGACTGTGAAAGACCTGAACACA
GCCACACGCATGACAGCCCAGAACGCCATGACCAAGGCCCTGCTCAAGAGGCCGCTGCGG
GAGATCCAGATGGAGAAGCTCAAGATCAGCGACCAGCTTCTGCTGGAGATCAACGATGTG
ACCAGGGCCTGGGGGCTGGAGGTAGACCGCGTGGAGCTGGCAGTGGAGGCCGTGCTCCAG
CCGCCCCAGGACAGCCCAGCTGGGCCCAACCTGGACAGCACCCTCCAGCAGCTGGCCCTG
CACTTCCTGGGAGGAAGCATGAACTCAATGGCAGGAGGTGCCCCGTCCCCGGGGCCAGCA
GACACCGTGGAGATGGTGAGTGAAGTTGAGCCACCTGCCCCTCAAGTTGGTGCCAGGTCC
AGTCCGAAGCAGCCTCTGGCGGAGGGGCTACTGACTGCTCTACAGCCCTTCCTGTCTGAG
GCCCTGGTCAGCCAAGTCGGGGCCTGCTACCAGTTCAATGTCGTCCTGCCCAGCGGCACC
CAAAGCGCCTACTTCCTGGACCTCACTACAGGACGAGGAAGAGTGGGACACGGGGTGCCT
GATGGCATCCCTGATGTGGTGGTGGAGATGGCCGAGGCAGACCTGCGGGCCCTGCTATGC
AGAGAGCTGCGGCCCCTGGGGGCCTACATGAGTGGACGGCTGAAGGTGAAGGGCGACCTG
GCTATGGCCATGAAGCTGGAGGCTGTCCTCAGGGCCTTGAAGGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT
ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA
GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC
GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG
GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG
AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG
CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG
TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC
TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT
TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG
TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC
TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT
GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT