OR13F1 ORF clone FXC11332

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Flexi ORF Clone FXC11332

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Clone info.

Species

human

Clone Name

pF1KE0877 Sequence (with vector) Restriction Map

Product ID

FXC11332

HaloTag Clone PID

FHC11332

ORF Sequence

DNA sequence (957 bp)
Protein sequence (319 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529294]

Gene

KIEE0877

Symbol

OR13F1

Alias : OR9-6

Description

olfactory receptor, family 13, subfamily F, member 1

Original Clone ID

cp01277

Features of the cloned ORF sequence

Description

Length: 957 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 319 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35087.1 2.8e-79 98.7 OR13F1 CCDS6778.1 7.4e-49 65.4 OR2K2 CCDS35094.1 8.8e-44 58.1 OR13D1 CCDS35092.1 3.5e-41 54.0 OR13C2 CCDS35093.1 4.7e-41 53.4 OR13C9 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 25 VIIFAVCLLMYLITLLGNIFLIS 47 PRIMARY 23 2 62 FLSNLSFLDIWYSSSALSPMLAN 84 SECONDARY 23 3 89 RNTISFSGCATQVYLSLAMGSTE 111 SECONDARY 23 4 114 LLPMMAYDRYVAICNPLRYPIIM 136 SECONDARY 23 5 140 TCVQIAAGSWMTGCLTAMVEMMS 162 SECONDARY 23 6 181 ILAILKLVCVDTSLVQLIMLVIS 203 PRIMARY 23 7 210 PMLLICISYAFILASILRISSVE 232 PRIMARY 23 8 236 KAFSTCTAHLMVVVLFYGMALSM 258 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001005216 311 615016,615082 46.5 94.4 NP_009091 312 600578 45.2 94.4 NP_835462 317 608493 46.7 95.0 NP_003691 308 608494 45.5 96.6 XP_011514322 317 608497 45.8 94.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0877 Download

>KIEE0877  957 bp
ATGTTCCCGGCAAATTGGACATCTGTAAAAGTATTTTTCTTCCTGGGATTTTCTCACTAC
CCCAAAGTTCAGGTCATCATATTTGCGGTGTGCTTGCTGATGTACCTGATCACCTTGCTG
GGCAACATTTTTCTGATCTCCATCACCATTCTAGATTCCCACCTGCACACCCCTATGTAC
CTCTTCCTCAGCAATCTCTCCTTTCTGGACATCTGGTACTCCTCTTCTGCGCTCTCTCCA
ATGCTGGCAAACTTTGTTTCAGGGAGAAACACTATTTCATTCTCAGGGTGCGCCACTCAG
GTGTACCTCTCCCTTGCCATGGGCTCCACTGAGTGTGTGCTCCTGCCCATGATGGCATAT
GACCGGTATGTGGCCATCTGCAACCCCCTGAGATACCCTATCATCATGAATAGGAGAACC
TGTGTGCAGATTGCAGCTGGCTCCTGGATGACAGGCTGTCTCACTGCCATGGTGGAAATG
ATGTCTGTGCTGCCACTGTCTCTCTGTGGTAATAGCATCATCAATCATTTCACTTGTGAA
ATTCTGGCCATCTTGAAATTGGTTTGTGTGGACACCTCCCTGGTGCAGTTAATCATGCTG
GTGATCAGTGTACTTCTTCTCCCCATGCCAATGCTACTCATTTGTATCTCTTATGCATTT
ATCCTCGCCAGTATCCTGAGAATCAGCTCAGTGGAAGGTCGAAGTAAAGCCTTTTCAACG
TGCACAGCCCACCTGATGGTGGTAGTTTTGTTCTATGGGATGGCTCTCTCCATGCACCTG
AAGCCCTCCGCTGTAGATTCACAGGAAATAGACAAATTTATGGCTTTGGTGTATGCCGGA
CAAACCCCCATGTTGAATCCTATCATCTATAGTCTACGGAACAAAGAGGTGAAAGTGGCC
TTGAAAAAATTGCTGATTAGAAATCATTTTAATACTGCCTTCATTTCCATCCTCAAA

ORF Protein

Cloned ORF protein sequence for pF1KE0877 Download

>KIEE0877  319 aa
MFPANWTSVKVFFFLGFSHYPKVQVIIFAVCLLMYLITLLGNIFLISITILDSHLHTPMY
LFLSNLSFLDIWYSSSALSPMLANFVSGRNTISFSGCATQVYLSLAMGSTECVLLPMMAY
DRYVAICNPLRYPIIMNRRTCVQIAAGSWMTGCLTAMVEMMSVLPLSLCGNSIINHFTCE
ILAILKLVCVDTSLVQLIMLVISVLLLPMPMLLICISYAFILASILRISSVEGRSKAFST
CTAHLMVVVLFYGMALSMHLKPSAVDSQEIDKFMALVYAGQTPMLNPIIYSLRNKEVKVA
LKKLLIRNHFNTAFISILK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0877 Download

>pF1KE0877  4070 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTTCCCGGCA
AATTGGACATCTGTAAAAGTATTTTTCTTCCTGGGATTTTCTCACTACCCCAAAGTTCAG
GTCATCATATTTGCGGTGTGCTTGCTGATGTACCTGATCACCTTGCTGGGCAACATTTTT
CTGATCTCCATCACCATTCTAGATTCCCACCTGCACACCCCTATGTACCTCTTCCTCAGC
AATCTCTCCTTTCTGGACATCTGGTACTCCTCTTCTGCGCTCTCTCCAATGCTGGCAAAC
TTTGTTTCAGGGAGAAACACTATTTCATTCTCAGGGTGCGCCACTCAGGTGTACCTCTCC
CTTGCCATGGGCTCCACTGAGTGTGTGCTCCTGCCCATGATGGCATATGACCGGTATGTG
GCCATCTGCAACCCCCTGAGATACCCTATCATCATGAATAGGAGAACCTGTGTGCAGATT
GCAGCTGGCTCCTGGATGACAGGCTGTCTCACTGCCATGGTGGAAATGATGTCTGTGCTG
CCACTGTCTCTCTGTGGTAATAGCATCATCAATCATTTCACTTGTGAAATTCTGGCCATC
TTGAAATTGGTTTGTGTGGACACCTCCCTGGTGCAGTTAATCATGCTGGTGATCAGTGTA
CTTCTTCTCCCCATGCCAATGCTACTCATTTGTATCTCTTATGCATTTATCCTCGCCAGT
ATCCTGAGAATCAGCTCAGTGGAAGGTCGAAGTAAAGCCTTTTCAACGTGCACAGCCCAC
CTGATGGTGGTAGTTTTGTTCTATGGGATGGCTCTCTCCATGCACCTGAAGCCCTCCGCT
GTAGATTCACAGGAAATAGACAAATTTATGGCTTTGGTGTATGCCGGACAAACCCCCATG
TTGAATCCTATCATCTATAGTCTACGGAACAAAGAGGTGAAAGTGGCCTTGAAAAAATTG
CTGATTAGAAATCATTTTAATACTGCCTTCATTTCCATCCTCAAAGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT