OR10J6P ORF clone FXC11319

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Flexi ORF Clone FXC11319

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Clone info.

Species

human

Clone Name

pF1KE0861 Sequence (with vector) Restriction Map

Product ID

FXC11319

HaloTag Clone PID

FHC11319

ORF Sequence

DNA sequence (828 bp)
Protein sequence (276 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529281]

Gene

KIEE0861

Symbol

OR10J6P

Alias : OR10J6

Description

olfactory receptor, family 10, subfamily J, member 6 pseudogene

Original Clone ID

cp01261

Features of the cloned ORF sequence

Description

Length: 828 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 276 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS30910.1 2.1e-55 74.3 OR10J5 CCDS1185.1 2.3e-51 70.3 OR10J1 CCDS30909.1 6.3e-48 65.1 OR10J3 CCDS30898.1 6.3e-34 48.4 OR10R2 CCDS31547.1 4.2e-33 45.2 OR10Q1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 175 191 PR00245 Olfactory receptor IPR000276 198 221 PR00237 GPCR IPR000725 235 244 PR00245 Olfactory receptor HMMPfam IPR000276 41 266 PF00001 GPCR ProfileScan IPR017452 41 276 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 34 LYTLTVAGNAIIMTIICIDRHLH 56 PRIMARY 23 2 95 AGCTTQTFFFVTLAINNCFLLTV 117 SECONDARY 23 3 140 VCVQLVCGAFSIGLAMAAVQVTS 162 PRIMARY 23 4 166 LPFCHTVVGHFFCDILPVMKLSC 188 SECONDARY 23 5 202 RLFVILVPMGLVFISYVLIISTV 224 PRIMARY 23 6 238 ATCAFHLTVVIVHYGCASIAYLM 260 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_835462 317 608493 41.6 98.6 NP_036501 317 608497 40.6 99.6 XP_011514322 317 608497 40.6 99.6 XP_011514321 317 608497 40.6 99.6 NP_003688 314 608492 40.6 99.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0861 Download

>KIEE0861  828 bp
ATGCGAAGAAAGAACCTCACAGAGGTAACAGAGTTTGTTTTCCTGGGATTCTCCAGATTC
CACAAACATCACATCACTCTCTTTGTGGTTTTTCTCATCCTGTACACATTAACTGTGGCT
GGCAATGCCATCATCATGACCATCATCTGCATTGACCGTCACCTCCACACTCCCATGTAC
TTCTTCCTGAGCATGCTGGCTAGCTCAAAGACAGTGTACACACTGTTCATCATTCCACAG
ATGCTCTCCAGCTTCGTAACCCAGACCCAGCCAATCTCCCTAGCAGGTTGTACCACCCAA
ACGTTCTTCTTTGTTACCTTGGCCATCAACAATTGCTTCTTGCTCACAGTGATGGGCTAT
GACCACTATATGGCCATCTGCAATCCCTTGAGATACAGGGTCATTACGAGCAAGAAGGTG
TGTGTCCAGCTGGTGTGTGGAGCCTTTAGCATTGGCCTGGCCATGGCAGCTGTCCAGGTA
ACATCCATATTTACCTTACCTTTTTGTCACACGGTGGTTGGTCATTTCTTCTGTGACATC
CTCCCTGTCATGAAACTCTCCTGTATTAATACCACTATCAATGAGATAATCAATTTTGTT
GTCAGGTTATTTGTCATCCTGGTCCCCATGGGTCTGGTCTTCATCTCCTATGTCCTCATC
ATCTCCACTGTCCTCAAGATTGCCTCAGCTGAGGGTTGGAAGAAGACCTTTGCCACCTGT
GCCTTCCACCTCACTGTGGTCATTGTCCATTATGGCTGTGCTTCCATTGCCTACCTCATG
CCCAAGTCAGAAAACTCTATAGAACAAGACCTCCTTCTCTCAGTGACC

ORF Protein

Cloned ORF protein sequence for pF1KE0861 Download

>KIEE0861  276 aa
MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPMY
FFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTLAINNCFLLTVMGY
DHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFCHTVVGHFFCDI
LPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFATC
AFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0861 Download

>pF1KE0861  3941 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCGAAGAAAG
AACCTCACAGAGGTAACAGAGTTTGTTTTCCTGGGATTCTCCAGATTCCACAAACATCAC
ATCACTCTCTTTGTGGTTTTTCTCATCCTGTACACATTAACTGTGGCTGGCAATGCCATC
ATCATGACCATCATCTGCATTGACCGTCACCTCCACACTCCCATGTACTTCTTCCTGAGC
ATGCTGGCTAGCTCAAAGACAGTGTACACACTGTTCATCATTCCACAGATGCTCTCCAGC
TTCGTAACCCAGACCCAGCCAATCTCCCTAGCAGGTTGTACCACCCAAACGTTCTTCTTT
GTTACCTTGGCCATCAACAATTGCTTCTTGCTCACAGTGATGGGCTATGACCACTATATG
GCCATCTGCAATCCCTTGAGATACAGGGTCATTACGAGCAAGAAGGTGTGTGTCCAGCTG
GTGTGTGGAGCCTTTAGCATTGGCCTGGCCATGGCAGCTGTCCAGGTAACATCCATATTT
ACCTTACCTTTTTGTCACACGGTGGTTGGTCATTTCTTCTGTGACATCCTCCCTGTCATG
AAACTCTCCTGTATTAATACCACTATCAATGAGATAATCAATTTTGTTGTCAGGTTATTT
GTCATCCTGGTCCCCATGGGTCTGGTCTTCATCTCCTATGTCCTCATCATCTCCACTGTC
CTCAAGATTGCCTCAGCTGAGGGTTGGAAGAAGACCTTTGCCACCTGTGCCTTCCACCTC
ACTGTGGTCATTGTCCATTATGGCTGTGCTTCCATTGCCTACCTCATGCCCAAGTCAGAA
AACTCTATAGAACAAGACCTCCTTCTCTCAGTGACCGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT