VN1R4 ORF clone FXC11305

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC11305

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Clone info.

Species

human

Clone Name

pF1KE0844 Sequence (with vector) Restriction Map

Product ID

FXC11305

HaloTag Clone PID

FHC11305

ORF Sequence

DNA sequence (903 bp)
Protein sequence (301 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529267]

Gene

KIEE0844

Symbol

VN1R4

Alias : V1RL4

Description

vomeronasal 1 receptor 4

Original Clone ID

cp01244

Features of the cloned ORF sequence

Description

Length: 903 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 301 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33099.1 6.6e-133 100.0 VN1R4 CCDS12862.1 1.4e-71 57.1 VN1R2 CCDS12951.1 5.9e-50 43.1 VN1R1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR004072 36 46 PR01534 Vomeronasal receptor IPR004072 75 89 PR01534 Vomeronasal receptor IPR004072 110 127 PR01534 Vomeronasal receptor IPR004072 207 221 PR01534 Vomeronasal receptor IPR004072 221 234 PR01534 Vomeronasal receptor IPR004072 281 292 PR01534 Vomeronasal receptor HMMPfam IPR004072 37 289 PF03402 Vomeronasal receptor ProfileScan IPR017452 21 285 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 6 VAVGMILSQTVVGVLGSFSVLLH 28 PRIMARY 23 2 60 KGVPQTMAAFGVRYFLNALGCKL 82 SECONDARY 23 3 90 GRGVSIGTTCLLSVFQVITVSS 111 SECONDARY 22 4 127 VGFSVLLCWIVCMLVNIIFPMYV 149 PRIMARY 23 5 181 AMLLSFPDVLCLGLMLWVSSSMV 203 SECONDARY 23 6 235 ILILVSTFVSSYTLSCLFQVCMA 257 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_065684 353 605234 43.1 99.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0844 Download

>KIEE0844  903 bp
ATGGCCTCCCGGTATGTGGCAGTGGGAATGATCTTATCACAGACCGTGGTGGGAGTCCTG
GGGAGCTTCTCTGTTCTTCTCCATTATCTCTCCTTTTACTGCACTGGGTGCAGGTTAAGG
TCCACAGATTTGATTGTTAAGCACCTGATTGTAGCCAACTTCTTAGCTCTCCGCTGTAAA
GGAGTCCCCCAGACAATGGCAGCTTTTGGGGTTAGATATTTTCTCAATGCTCTTGGGTGC
AAACTTGTTTTCTATCTCCATAGAGTGGGCAGGGGAGTGTCCATTGGCACCACCTGCCTC
TTGAGTGTCTTCCAGGTGATCACGGTCAGCTCCAGGAAATCCAGGTGGGCAAAACTTAAA
GAGAAAGCCCCCAAGCATGTTGGCTTTTCTGTTCTCCTGTGCTGGATCGTGTGCATGTTG
GTAAACATCATCTTTCCCATGTATGTGACTGGCAAATGGAACTACACAAACATCACAGTG
AACGAGGATTTGGGATACTGTTCTGGGGGAGGCAACAACAAAATCGCACAGACACTGCGT
GCAATGTTGTTATCATTCCCTGATGTGTTGTGTCTGGGGCTCATGCTCTGGGTCAGCAGC
TCCATGGTTTGCATACTGCACAGGCACAAGCAGCGGGTCCAGCACATTGATAGGAGCAAT
CTCTCCCCCAGAGCCTCCCCAGAGAACAGAGCTACGCAGAGCATCCTCATCCTGGTGAGC
ACCTTTGTGTCTTCTTACACTCTCTCCTGCCTTTTCCAAGTTTGTATGGCTCTTTTGGAT
AATCCCAATAGTTTACTGGTGAACACTTCAGCCTTAATGAGTGTATGTTTCCCAACTCTC
AGCCCCTTTGTTCTCATGAGCTGTGACCCCAGTGTATACAGGTTTTGTTTTGCCTGGAAA
AGA

ORF Protein

Cloned ORF protein sequence for pF1KE0844 Download

>KIEE0844  301 aa
MASRYVAVGMILSQTVVGVLGSFSVLLHYLSFYCTGCRLRSTDLIVKHLIVANFLALRCK
GVPQTMAAFGVRYFLNALGCKLVFYLHRVGRGVSIGTTCLLSVFQVITVSSRKSRWAKLK
EKAPKHVGFSVLLCWIVCMLVNIIFPMYVTGKWNYTNITVNEDLGYCSGGGNNKIAQTLR
AMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSNLSPRASPENRATQSILILVS
TFVSSYTLSCLFQVCMALLDNPNSLLVNTSALMSVCFPTLSPFVLMSCDPSVYRFCFAWK
R

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0844 Download

>pF1KE0844  4016 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCTCCCGG
TATGTGGCAGTGGGAATGATCTTATCACAGACCGTGGTGGGAGTCCTGGGGAGCTTCTCT
GTTCTTCTCCATTATCTCTCCTTTTACTGCACTGGGTGCAGGTTAAGGTCCACAGATTTG
ATTGTTAAGCACCTGATTGTAGCCAACTTCTTAGCTCTCCGCTGTAAAGGAGTCCCCCAG
ACAATGGCAGCTTTTGGGGTTAGATATTTTCTCAATGCTCTTGGGTGCAAACTTGTTTTC
TATCTCCATAGAGTGGGCAGGGGAGTGTCCATTGGCACCACCTGCCTCTTGAGTGTCTTC
CAGGTGATCACGGTCAGCTCCAGGAAATCCAGGTGGGCAAAACTTAAAGAGAAAGCCCCC
AAGCATGTTGGCTTTTCTGTTCTCCTGTGCTGGATCGTGTGCATGTTGGTAAACATCATC
TTTCCCATGTATGTGACTGGCAAATGGAACTACACAAACATCACAGTGAACGAGGATTTG
GGATACTGTTCTGGGGGAGGCAACAACAAAATCGCACAGACACTGCGTGCAATGTTGTTA
TCATTCCCTGATGTGTTGTGTCTGGGGCTCATGCTCTGGGTCAGCAGCTCCATGGTTTGC
ATACTGCACAGGCACAAGCAGCGGGTCCAGCACATTGATAGGAGCAATCTCTCCCCCAGA
GCCTCCCCAGAGAACAGAGCTACGCAGAGCATCCTCATCCTGGTGAGCACCTTTGTGTCT
TCTTACACTCTCTCCTGCCTTTTCCAAGTTTGTATGGCTCTTTTGGATAATCCCAATAGT
TTACTGGTGAACACTTCAGCCTTAATGAGTGTATGTTTCCCAACTCTCAGCCCCTTTGTT
CTCATGAGCTGTGACCCCAGTGTATACAGGTTTTGTTTTGCCTGGAAAAGAGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT