OR5M2P ORF clone FXC11291

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Flexi ORF Clone FXC11291

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Clone info.

Species

human

Clone Name

pF1KE0822 Sequence (with vector) Restriction Map

Product ID

FXC11291

HaloTag Clone PID

FHC11291

ORF Sequence

DNA sequence (696 bp)
Protein sequence (232 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529253]

Gene

KIEE0822

Symbol

OR5M2P

Alias : OR11-193

Description

olfactory receptor, family 5, subfamily M, member 2 pseudogene

Original Clone ID

cp01222

Features of the cloned ORF sequence

Description

Length: 696 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 232 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31533.1 9.2e-61 71.6 OR5M8 CCDS31532.1 1.7e-59 68.3 OR5M3 CCDS31531.1 6.3e-59 68.3 OR5M9 CCDS53630.1 8.3e-56 60.8 OR5M10 CCDS53631.1 4.1e-55 60.3 OR5M1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000725 12 23 PR00245 Olfactory receptor IPR000725 49 61 PR00245 Olfactory receptor IPR000725 96 112 PR00245 Olfactory receptor IPR000725 156 165 PR00245 Olfactory receptor IPR000725 203 214 PR00245 Olfactory receptor HMMPfam IPR000276 3 209 PF00001 GPCR ProfileScan IPR017452 1 210 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 15 AGCLMQCYVVIAVVLAEHCMLAV 37 PRIMARY 23 2 59 GVCVHLVIVPYVYGFLLSVMETL 81 PRIMARY 23 3 127 NVQSLLIILTSYMFILVAILRS 148 PRIMARY 22 4 190 QGKMVAVFYTTVILMLNSMIYGL 212 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003688 314 608492 48.2 98.3 NP_006628 314 608496 47.1 97.0 NP_001004729 311 615702 43.5 96.1 NP_001005216 311 615016,615082 42.5 97.4 XP_011520809 312 603232 44.1 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0822 Download

>KIEE0822  696 bp
ATGCTAGAAAATTTCTTATCAGAGAAGAAGACCATTTCCTATGCAGGTTGTTTGATGCAG
TGCTATGTTGTCATTGCTGTGGTCCTTGCAGAGCACTGCATGTTGGCAGTCATGGCATAT
GACCGCTATATGGCCATCTGTAATCCATTGCTCTACAGTAGCAAAATGTCCCAAGGTGTT
TGTGTCCACCTGGTCATTGTCCCTTATGTCTATGGCTTTCTTCTCAGTGTGATGGAAACC
TTAAGGACCTACAACCTCTCCTTCTGTGGAACAAATGAAATCAACCATTTCTACTGTGCT
GATCCTCCTCTTATCAAACTGGCATGCTCTGACACGTACAGCAAGGAGCTGTCCATGTAC
ATAGTAGCCGGCTACAGCAACGTCCAGTCTCTTCTGATCATTCTCACATCCTACATGTTC
ATCCTTGTCGCTATCCTCAGAAGCCATTCTGCAGAGGGAAGGAAAAAAGCTTTTTCCACA
TGTGGTTCCCACCTGACAGTTGTCACAATCTTCTATGGAACCCTCTTCTGCATGCATTTG
AGACGTCCCACAGACGAGTCCGTGGAGCAGGGGAAAATGGTGGCTGTGTTTTACACCACA
GTGATACTCATGCTGAACTCCATGATCTATGGCCTCAGGAACAAGGATGTGAAAGAGGCG
TTGAAAAAAGCAATAGGAAAACAAACATTGGGAAAA

ORF Protein

Cloned ORF protein sequence for pF1KE0822 Download

>KIEE0822  232 aa
MLENFLSEKKTISYAGCLMQCYVVIAVVLAEHCMLAVMAYDRYMAICNPLLYSSKMSQGV
CVHLVIVPYVYGFLLSVMETLRTYNLSFCGTNEINHFYCADPPLIKLACSDTYSKELSMY
IVAGYSNVQSLLIILTSYMFILVAILRSHSAEGRKKAFSTCGSHLTVVTIFYGTLFCMHL
RRPTDESVEQGKMVAVFYTTVILMLNSMIYGLRNKDVKEALKKAIGKQTLGK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0822 Download

>pF1KE0822  3809 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTAGAAAAT
TTCTTATCAGAGAAGAAGACCATTTCCTATGCAGGTTGTTTGATGCAGTGCTATGTTGTC
ATTGCTGTGGTCCTTGCAGAGCACTGCATGTTGGCAGTCATGGCATATGACCGCTATATG
GCCATCTGTAATCCATTGCTCTACAGTAGCAAAATGTCCCAAGGTGTTTGTGTCCACCTG
GTCATTGTCCCTTATGTCTATGGCTTTCTTCTCAGTGTGATGGAAACCTTAAGGACCTAC
AACCTCTCCTTCTGTGGAACAAATGAAATCAACCATTTCTACTGTGCTGATCCTCCTCTT
ATCAAACTGGCATGCTCTGACACGTACAGCAAGGAGCTGTCCATGTACATAGTAGCCGGC
TACAGCAACGTCCAGTCTCTTCTGATCATTCTCACATCCTACATGTTCATCCTTGTCGCT
ATCCTCAGAAGCCATTCTGCAGAGGGAAGGAAAAAAGCTTTTTCCACATGTGGTTCCCAC
CTGACAGTTGTCACAATCTTCTATGGAACCCTCTTCTGCATGCATTTGAGACGTCCCACA
GACGAGTCCGTGGAGCAGGGGAAAATGGTGGCTGTGTTTTACACCACAGTGATACTCATG
CTGAACTCCATGATCTATGGCCTCAGGAACAAGGATGTGAAAGAGGCGTTGAAAAAAGCA
ATAGGAAAACAAACATTGGGAAAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT