OR5J1P ORF clone FXC11286

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Flexi ORF Clone FXC11286

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Clone info.

Species

human

Clone Name

pF1KE0814 Sequence (with vector) Restriction Map

Product ID

FXC11286

HaloTag Clone PID

FHC11286

ORF Sequence

DNA sequence (768 bp)
Protein sequence (256 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529248]

Gene

KIEE0814

Symbol

OR5J1P

Alias : HTPCRH02, OR11-169, OR5J1

Description

olfactory receptor, family 5, subfamily J, member 1 pseudogene

Original Clone ID

cp01214

Features of the cloned ORF sequence

Description

Length: 768 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 256 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31522.1 5.4e-43 68.0 OR5J2 CCDS7949.1 2.8e-34 52.0 OR5I1 CCDS31706.1 3.4e-34 52.9 OR8D1 CCDS31709.1 3.5e-31 48.0 OR8B3 CCDS31551.1 7.5e-31 49.8 OR5B12 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 53 77 PR00237 GPCR IPR000725 119 130 PR00245 Olfactory receptor IPR000276 131 153 PR00237 GPCR IPR000725 156 168 PR00245 Olfactory receptor IPR000725 203 219 PR00245 Olfactory receptor HMMPfam IPR000276 68 254 PF00001 GPCR ProfileScan IPR017452 68 256 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MVLILRYHYSELIPISISLTG 21 SECONDARY 21 2 57 LFLLIYTISLVGNIGMLFLIYVT 79 PRIMARY 23 3 89 FLSCLSFVDACYSSVFAPRMLLN 111 SECONDARY 23 4 122 SACIVQYFLFVSLLTTEGFLLAT 144 PRIMARY 23 5 156 PLLYTVAMTKIVCIVLAFGSCMG 178 PRIMARY 23 6 224 LLLLIFSGIIATLTFLTVVISYI 246 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006628 314 608496 52.0 88.7 NP_003688 314 608492 46.1 89.1 NP_001004729 311 615702 45.1 87.5 XP_011520808 322 603232 41.6 89.8 XP_011520809 312 603232 41.9 89.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0814 Download

>KIEE0814  768 bp
ATGGTCTTGATATTGCGGTATCATTACTCTGAATTAATTCCAATCTCCATATCATTAACA
GGCATCAAGAAACACAAATCCATGGCTGATGTTAATTTTACATTGGTTACTGAGTTTATC
CTTTTGGAACTGACAGATCGTGCTGAACTGAAGATGGTCCTCTTCGTGTTGTTCCTGCTG
ATCTACACCATTTCCCTGGTGGGAAATATAGGAATGCTCTTTCTAATCTATGTAACTCCC
AAACTCCACACACCCATGTATTATTTCCTCAGCTGTCTGTCATTTGTTGATGCCTGCTAT
TCATCAGTTTTTGCACCCAGAATGCTGCTGAACTTCTTTGTTGAGCGGGAGACAATCTTA
TTCTCTGCATGTATTGTGCAGTATTTTTTATTCGTGTCTCTCCTTACCACTGAGGGCTTC
TTGCTGGCCACAATGGCTTACGACCGTTACATGGCCATTGTGAACCCTTTACTTTATACA
GTAGCTATGACTAAAATAGTTTGTATTGTGCTCGCATTTGGGTCATGTATGGGAGGTTTA
ATCAACTCATTGACACATACAATTGGCTTGGTGAAACTGTCTTTCTGTGGGCCAAATGTC
ATCAGTCACTTCTTCTGTGATCTTCCCCCACTGTTGAAGCTGTCATGTTCTGAGACATCT
ATGAATGAATTGTTGCTTTTGATCTTCTCTGGCATTATTGCCACGCTCACTTTTTTGACT
GTGGTGATCTCCTACATCTTCATTGTTGCTGCTATCCTGAGGATCCGC

ORF Protein

Cloned ORF protein sequence for pF1KE0814 Download

>KIEE0814  256 aa
MVLILRYHYSELIPISISLTGIKKHKSMADVNFTLVTEFILLELTDRAELKMVLFVLFLL
IYTISLVGNIGMLFLIYVTPKLHTPMYYFLSCLSFVDACYSSVFAPRMLLNFFVERETIL
FSACIVQYFLFVSLLTTEGFLLATMAYDRYMAIVNPLLYTVAMTKIVCIVLAFGSCMGGL
INSLTHTIGLVKLSFCGPNVISHFFCDLPPLLKLSCSETSMNELLLLIFSGIIATLTFLT
VVISYIFIVAAILRIR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0814 Download

>pF1KE0814  3881 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTCTTGATA
TTGCGGTATCATTACTCTGAATTAATTCCAATCTCCATATCATTAACAGGCATCAAGAAA
CACAAATCCATGGCTGATGTTAATTTTACATTGGTTACTGAGTTTATCCTTTTGGAACTG
ACAGATCGTGCTGAACTGAAGATGGTCCTCTTCGTGTTGTTCCTGCTGATCTACACCATT
TCCCTGGTGGGAAATATAGGAATGCTCTTTCTAATCTATGTAACTCCCAAACTCCACACA
CCCATGTATTATTTCCTCAGCTGTCTGTCATTTGTTGATGCCTGCTATTCATCAGTTTTT
GCACCCAGAATGCTGCTGAACTTCTTTGTTGAGCGGGAGACAATCTTATTCTCTGCATGT
ATTGTGCAGTATTTTTTATTCGTGTCTCTCCTTACCACTGAGGGCTTCTTGCTGGCCACA
ATGGCTTACGACCGTTACATGGCCATTGTGAACCCTTTACTTTATACAGTAGCTATGACT
AAAATAGTTTGTATTGTGCTCGCATTTGGGTCATGTATGGGAGGTTTAATCAACTCATTG
ACACATACAATTGGCTTGGTGAAACTGTCTTTCTGTGGGCCAAATGTCATCAGTCACTTC
TTCTGTGATCTTCCCCCACTGTTGAAGCTGTCATGTTCTGAGACATCTATGAATGAATTG
TTGCTTTTGATCTTCTCTGGCATTATTGCCACGCTCACTTTTTTGACTGTGGTGATCTCC
TACATCTTCATTGTTGCTGCTATCCTGAGGATCCGCGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT