OR52Z1 ORF clone FXC11281

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Flexi ORF Clone FXC11281

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Clone info.

Species

human

Clone Name

pF1KE0808 Sequence (with vector) Restriction Map

Product ID

FXC11281

HaloTag Clone PID

FHC11281

ORF Sequence

DNA sequence (843 bp)
Protein sequence (281 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529243]

Gene

KIEE0808

Symbol

OR52Z1

Alias : OR52Z1P

Description

olfactory receptor, family 52, subfamily Z, member 1 (gene/pseudogene)

Original Clone ID

cp01208

Features of the cloned ORF sequence

Description

Length: 843 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 281 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53598.1 3.7e-46 57.6 OR52B2 CCDS31384.1 4.5e-46 58.5 OR52D1 CCDS31400.1 1.3e-45 59.1 OR52E8 CCDS41611.1 6.4e-45 59.1 OR52B6 CCDS31386.1 1.6e-42 54.3 OR52H1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 47 PR00237 GPCR IPR000725 59 70 PR00245 Olfactory receptor IPR000276 71 93 PR00237 GPCR IPR000725 96 108 PR00245 Olfactory receptor IPR000725 142 158 PR00245 Olfactory receptor IPR000276 165 188 PR00237 GPCR IPR000725 202 211 PR00245 Olfactory receptor IPR000276 241 267 PR00237 GPCR IPR000725 252 263 PR00245 Olfactory receptor HMMPfam IPR000276 8 259 PF00001 GPCR ProfileScan IPR017452 8 259 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 2 YIVAVAGNIFLIFLIMTERSLHE 24 PRIMARY 23 2 31 SMLASANFLLAAAAAPEVLAILW 53 PRIMARY 23 3 76 VAESAILLAMAFDRYVAICYPLR 98 SECONDARY 23 4 110 IGIAAVVRSFFICCPFIFLVYRL 132 PRIMARY 23 5 172 STGLDIVLIIISYTMILHAVFQM 194 PRIMARY 23 6 208 GSHICVIFMFYTPAFFSFLAHRF 230 PRIMARY 23 7 238 HIHILVGSLYVLVPPMLNPIIYG 260 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 47.3 97.5 NP_689643 318 611267 46.9 97.5 NP_001005191 312 611538 34.6 99.6 NP_835462 317 608493 30.9 98.6 NP_002539 312 164342 32.4 94.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0808 Download

>KIEE0808  843 bp
ATGTACATTGTGGCTGTTGCAGGCAATATCTTCTTGATCTTCCTGATCATGACTGAGCGC
AGTCTCCATGAGCCCTTGTATCTCTTCCTATCCATGCTGGCCTCAGCCAACTTCCTGCTC
GCCGCTGCTGCAGCCCCTGAGGTGCTGGCTATCCTCTGGTTCCACTCCATGGACATATCC
TTTGGTAGTTGTGTGTCTCAGATGTTCTTCATACATTTCATCTTTGTGGCAGAATCTGCT
ATTCTCCTGGCAATGGCATTTGACCGCTATGTGGCCATCTGTTACCCACTGAGATACACC
ATTTTAACCTCATCAGCCGTCAGGAAGATTGGCATAGCAGCTGTGGTCAGGAGCTTTTTC
ATCTGCTGTCCGTTCATCTTCCTGGTATACCGACTTACATATTGTGGGAGAAACATCATT
CCTCATTCCTACTGTGAGCACATGGGCATTGCCAGATTGGCTTGTGGCAATATCAATGTC
AATATCATTTATGGCCTCACTGTGGCCCTACTCTCTACAGGACTGGATATAGTGCTTATC
ATTATATCCTACACAATGATCCTTCACGCAGTGTTTCAGATGTCTTCCTGGGCTGCCAGG
TTCAAGGCCCTTAGTACGTGCGGCTCTCATATCTGTGTCATATTTATGTTCTATACCCCA
GCATTCTTTTCATTTCTTGCCCATCGCTTTGGAGGTAAAACCATCCCTCACCACATTCAC
ATCCTAGTGGGCAGTCTCTATGTGTTAGTGCCCCCTATGCTAAACCCCATCATTTATGGG
GTGAAGACCAAACAAATTAAAGATCGAGTGATTTTGCTTTTCTCTCCTATCAGTGTATGC
TGT

ORF Protein

Cloned ORF protein sequence for pF1KE0808 Download

>KIEE0808  281 aa
MYIVAVAGNIFLIFLIMTERSLHEPLYLFLSMLASANFLLAAAAAPEVLAILWFHSMDIS
FGSCVSQMFFIHFIFVAESAILLAMAFDRYVAICYPLRYTILTSSAVRKIGIAAVVRSFF
ICCPFIFLVYRLTYCGRNIIPHSYCEHMGIARLACGNINVNIIYGLTVALLSTGLDIVLI
IISYTMILHAVFQMSSWAARFKALSTCGSHICVIFMFYTPAFFSFLAHRFGGKTIPHHIH
ILVGSLYVLVPPMLNPIIYGVKTKQIKDRVILLFSPISVCC

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0808 Download

>pF1KE0808  3956 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTACATTGTG
GCTGTTGCAGGCAATATCTTCTTGATCTTCCTGATCATGACTGAGCGCAGTCTCCATGAG
CCCTTGTATCTCTTCCTATCCATGCTGGCCTCAGCCAACTTCCTGCTCGCCGCTGCTGCA
GCCCCTGAGGTGCTGGCTATCCTCTGGTTCCACTCCATGGACATATCCTTTGGTAGTTGT
GTGTCTCAGATGTTCTTCATACATTTCATCTTTGTGGCAGAATCTGCTATTCTCCTGGCA
ATGGCATTTGACCGCTATGTGGCCATCTGTTACCCACTGAGATACACCATTTTAACCTCA
TCAGCCGTCAGGAAGATTGGCATAGCAGCTGTGGTCAGGAGCTTTTTCATCTGCTGTCCG
TTCATCTTCCTGGTATACCGACTTACATATTGTGGGAGAAACATCATTCCTCATTCCTAC
TGTGAGCACATGGGCATTGCCAGATTGGCTTGTGGCAATATCAATGTCAATATCATTTAT
GGCCTCACTGTGGCCCTACTCTCTACAGGACTGGATATAGTGCTTATCATTATATCCTAC
ACAATGATCCTTCACGCAGTGTTTCAGATGTCTTCCTGGGCTGCCAGGTTCAAGGCCCTT
AGTACGTGCGGCTCTCATATCTGTGTCATATTTATGTTCTATACCCCAGCATTCTTTTCA
TTTCTTGCCCATCGCTTTGGAGGTAAAACCATCCCTCACCACATTCACATCCTAGTGGGC
AGTCTCTATGTGTTAGTGCCCCCTATGCTAAACCCCATCATTTATGGGGTGAAGACCAAA
CAAATTAAAGATCGAGTGATTTTGCTTTTCTCTCCTATCAGTGTATGCTGTGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT