OR13D1 ORF clone FXC10555

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Flexi ORF Clone FXC10555

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Clone info.

Species

human

Clone Name

pF1KE0876 Sequence (with vector) Restriction Map

Product ID

FXC10555

HaloTag Clone PID

FHC10555

ORF Sequence

DNA sequence (1038 bp)
Protein sequence (346 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587601]

Gene

KIEE0876

Symbol

OR13D1

Alias : OR9-15

Description

olfactory receptor, family 13, subfamily D, member 1

Original Clone ID

cp01276

Note

We obtained this clone using the E.coli strain JM109.

Features of the cloned ORF sequence

Description

Length: 1038 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 346 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35094.1 1.2e-92 100.0 OR13D1 CCDS6778.1 5.8e-51 62.1 OR2K2 CCDS35092.1 1.4e-50 59.7 OR13C2 CCDS35088.1 2.6e-50 59.1 OR13C4 CCDS35093.1 8.9e-50 59.4 OR13C9 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 58 82 PR00237 GPCR IPR000276 91 112 PR00237 GPCR IPR000725 124 135 PR00245 Olfactory receptor IPR000276 136 158 PR00237 GPCR IPR000725 161 173 PR00245 Olfactory receptor IPR000725 208 224 PR00245 Olfactory receptor IPR000276 231 254 PR00237 GPCR IPR000725 268 277 PR00245 Olfactory receptor IPR000276 304 330 PR00237 GPCR IPR000725 315 326 PR00245 Olfactory receptor HMMPfam IPR000276 73 322 PF00001 GPCR ProfileScan IPR017452 73 322 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 55 LQLFLFLLCLIMYMIILLGNSLL 77 PRIMARY 23 2 127 IGCALQMVVSLGLGSTECVLLAV 149 PRIMARY 23 3 172 LYVQMAAWSWIIGCLTSLLQTVL 194 PRIMARY 23 4 240 VILLLLIFISYVFILSSILRINC 262 PRIMARY 23 5 269 AFSTCSAHSIVVILFYGSALFM 290 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011514322 317 608497 48.9 88.2 XP_011514321 317 608497 48.9 88.2 NP_036501 317 608497 48.9 88.2 NP_009091 312 600578 45.0 89.3 XP_011513214 300 600578 46.3 85.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0876 Download

>KIEE0876  1038 bp
ATGTACAGATTTACAGATTTTGATGTATCAAACATTTCAATTTACCTGAATCATGTCCTT
TTCTATACTACCCAGCAGGCAGGTGACCTAGAACACATGGAGACAAGAAATTACTCTGCC
ATGACTGAATTCTTTCTGGTGGGGCTTTCCCAATATCCAGAGCTCCAGCTTTTTCTGTTC
CTGCTCTGCCTCATCATGTACATGATAATCCTCCTGGGAAATAGCCTCCTCATTATCATC
ACCATCTTGGATTCTCGCCTCCATACTCCCATGTATTTCTTTCTTGGAAACCTCTCATTC
TTGGACATCTGTTACACATCCTCATCCATTCCTCCAATGCTTATTATATTTATGTCTGAG
AGAAAATCCATCTCCTTCATTGGCTGTGCTCTGCAGATGGTTGTGTCCCTTGGCTTGGGC
TCCACTGAGTGTGTCCTCCTGGCTGTGATGGCCTATGACCACTATGTGGCCATCTGCAAC
CCACTGAGGTACTCCATCATCATGAACGGAGTGCTGTATGTGCAAATGGCTGCATGGTCC
TGGATCATAGGCTGTCTGACCTCCCTATTGCAAACAGTTCTGACAATGATGTTGCCTTTC
TGTGGGAATAATGTCATTGATCATATTACCTGTGAAATTTTGGCCCTTCTAAAACTTGTT
TGTTCAGATATCACCATCAATGTGCTTATCATGACAGTGACAAATATTGTTTCACTGGTG
ATTCTTCTACTGTTAATTTTCATCTCCTATGTGTTTATTCTCTCTTCCATCCTGAGAATT
AATTGTGCTGAGGGAAGAAAGAAAGCCTTCTCTACCTGTTCAGCGCACTCGATTGTGGTC
ATCTTATTCTACGGTTCAGCCCTTTTTATGTACATGAAACCCAAGTCAAAGAACACTAAT
ACATCTGATGAGATTATTGGGCTGTCTTATGGAGTGGTAAGCCCAATGTTAAATCCCATC
ATCTATAGCCTCAGGAATAAAGAGGTCAAAGAGGCTGTAAAGAAAGTCCTGAGCAGACAT
CTGCATTTATTGAAAATG

ORF Protein

Cloned ORF protein sequence for pF1KE0876 Download

>KIEE0876  346 aa
MYRFTDFDVSNISIYLNHVLFYTTQQAGDLEHMETRNYSAMTEFFLVGLSQYPELQLFLF
LLCLIMYMIILLGNSLLIIITILDSRLHTPMYFFLGNLSFLDICYTSSSIPPMLIIFMSE
RKSISFIGCALQMVVSLGLGSTECVLLAVMAYDHYVAICNPLRYSIIMNGVLYVQMAAWS
WIIGCLTSLLQTVLTMMLPFCGNNVIDHITCEILALLKLVCSDITINVLIMTVTNIVSLV
ILLLLIFISYVFILSSILRINCAEGRKKAFSTCSAHSIVVILFYGSALFMYMKPKSKNTN
TSDEIIGLSYGVVSPMLNPIIYSLRNKEVKEAVKKVLSRHLHLLKM

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0876 Download

>pF1KE0876  4151 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTACAGATTT
ACAGATTTTGATGTATCAAACATTTCAATTTACCTGAATCATGTCCTTTTCTATACTACC
CAGCAGGCAGGTGACCTAGAACACATGGAGACAAGAAATTACTCTGCCATGACTGAATTC
TTTCTGGTGGGGCTTTCCCAATATCCAGAGCTCCAGCTTTTTCTGTTCCTGCTCTGCCTC
ATCATGTACATGATAATCCTCCTGGGAAATAGCCTCCTCATTATCATCACCATCTTGGAT
TCTCGCCTCCATACTCCCATGTATTTCTTTCTTGGAAACCTCTCATTCTTGGACATCTGT
TACACATCCTCATCCATTCCTCCAATGCTTATTATATTTATGTCTGAGAGAAAATCCATC
TCCTTCATTGGCTGTGCTCTGCAGATGGTTGTGTCCCTTGGCTTGGGCTCCACTGAGTGT
GTCCTCCTGGCTGTGATGGCCTATGACCACTATGTGGCCATCTGCAACCCACTGAGGTAC
TCCATCATCATGAACGGAGTGCTGTATGTGCAAATGGCTGCATGGTCCTGGATCATAGGC
TGTCTGACCTCCCTATTGCAAACAGTTCTGACAATGATGTTGCCTTTCTGTGGGAATAAT
GTCATTGATCATATTACCTGTGAAATTTTGGCCCTTCTAAAACTTGTTTGTTCAGATATC
ACCATCAATGTGCTTATCATGACAGTGACAAATATTGTTTCACTGGTGATTCTTCTACTG
TTAATTTTCATCTCCTATGTGTTTATTCTCTCTTCCATCCTGAGAATTAATTGTGCTGAG
GGAAGAAAGAAAGCCTTCTCTACCTGTTCAGCGCACTCGATTGTGGTCATCTTATTCTAC
GGTTCAGCCCTTTTTATGTACATGAAACCCAAGTCAAAGAACACTAATACATCTGATGAG
ATTATTGGGCTGTCTTATGGAGTGGTAAGCCCAATGTTAAATCCCATCATCTATAGCCTC
AGGAATAAAGAGGTCAAAGAGGCTGTAAAGAAAGTCCTGAGCAGACATCTGCATTTATTG
AAAATGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT