OR1J1 ORF clone FXC03541

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Flexi ORF Clone FXC03541

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Clone info.

Species

human

Clone Name

pF1KE0889 Sequence (with vector) Restriction Map

Product ID

FXC03541

HaloTag Clone PID

FHC03541

ORF Sequence

DNA sequence (966 bp)
Protein sequence (322 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529234]

Gene

KIEE0889

Symbol

OR1J1

Alias : OR9-18, hg32

Description

olfactory receptor, family 1, subfamily J, member 1

Original Clone ID

cp01289

Features of the cloned ORF sequence

Description

Length: 966 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 322 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35120.1 1.4e-84 100.0 OR1J1 CCDS35122.1 1.9e-61 73.5 OR1J4 CCDS35121.1 3.5e-61 75.0 OR1J2 CCDS11024.1 3.2e-49 59.3 OR1E1 CCDS10496.1 1.1e-47 59.0 OR1F1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000276 140 161 PR00237 GPCR IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 32 LGMYLTTVLGNLLIMLLIQLDSH 54 PRIMARY 23 2 94 YKGCISQTYFFIFFADLDSFLIT 116 SECONDARY 23 3 145 VAGSWVIACACALLHTLLLAQLS 167 PRIMARY 23 4 200 FTAALTAIMLPFLCILVSYGHIG 222 PRIMARY 23 5 246 SVVTIYYRTIIGLYFLPPSSNTN 268 SECONDARY 23 6 270 KNIIASVIYTAVTPMLNPFIYSL 292 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_036492 312 603232 59.0 95.3 XP_011520809 312 603232 59.0 95.3 XP_011520808 322 603232 59.0 95.3 NP_001005191 312 611538 51.9 95.7 NP_002539 312 164342 45.9 95.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0889 Download

>KIEE0889  966 bp
ATGAGCCCTGAGAACCAGAGCAGCGTGTCCGAGTTCCTCCTCCTGGGCCTCCCCATCCGG
CCAGAGCAGCAGGCCGTGTTCTTCGCCCTGTTCCTGGGCATGTACCTGACCACGGTGCTG
GGGAACCTGCTCATCATGCTGCTCATCCAGCTAGACTCTCACCTTCACACCCCCATGTAC
TTCTTCCTTAGCCACTTGGCCCTCACTGACATCTCCTTTTCATCTGTCACTGTCCCTAAG
ATGCTGATGAACATGCAGACTCAGCACCTAGCCGTCTTTTACAAGGGATGCATTTCACAG
ACATATTTTTTCATATTTTTTGCTGACTTAGACAGTTTCCTTATCACTTCAATGGCATAT
GACAGGTATGTGGCCATCTGTCATCCTCTACATTATGCCACCATCATGACTCAGAGCCAG
TGTGTCATGCTGGTGGCTGGGTCCTGGGTCATCGCTTGTGCGTGTGCTCTTTTGCATACC
CTCCTCCTGGCCCAGCTTTCCTTCTGTGCTGACCACATCATCCCTCACTACTTCTGTGAC
CTTGGTGCCCTGCTCAAGTTGTCCTGCTCAGACACCTCCCTCAATCAGTTAGCAATCTTT
ACAGCAGCATTGACAGCCATTATGCTTCCATTCCTGTGCATCCTGGTTTCTTATGGTCAC
ATTGGGGTCACCATCCTCCAGATTCCCTCTACCAAGGGCATATGCAAAGCCTTGTCCACT
TGTGGATCCCACCTCTCAGTGGTGACTATCTATTATCGGACAATTATTGGTCTCTATTTT
CTTCCCCCATCCAGCAACACCAATGACAAGAACATAATTGCTTCAGTGATATACACAGCA
GTCACTCCCATGTTGAACCCATTCATTTACAGTCTGAGAAATAAAGACATTAAGGGAGCC
CTAAGAAAACTCTTGAGTAGGTCAGGCGCAGTGGCTCATGCCTGTAATCTCAACACTTTG
GGAGGC

ORF Protein

Cloned ORF protein sequence for pF1KE0889 Download

>KIEE0889  322 aa
MSPENQSSVSEFLLLGLPIRPEQQAVFFALFLGMYLTTVLGNLLIMLLIQLDSHLHTPMY
FFLSHLALTDISFSSVTVPKMLMNMQTQHLAVFYKGCISQTYFFIFFADLDSFLITSMAY
DRYVAICHPLHYATIMTQSQCVMLVAGSWVIACACALLHTLLLAQLSFCADHIIPHYFCD
LGALLKLSCSDTSLNQLAIFTAALTAIMLPFLCILVSYGHIGVTILQIPSTKGICKALST
CGSHLSVVTIYYRTIIGLYFLPPSSNTNDKNIIASVIYTAVTPMLNPFIYSLRNKDIKGA
LRKLLSRSGAVAHACNLNTLGG

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0889 Download

>pF1KE0889  4079 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCCCTGAG
AACCAGAGCAGCGTGTCCGAGTTCCTCCTCCTGGGCCTCCCCATCCGGCCAGAGCAGCAG
GCCGTGTTCTTCGCCCTGTTCCTGGGCATGTACCTGACCACGGTGCTGGGGAACCTGCTC
ATCATGCTGCTCATCCAGCTAGACTCTCACCTTCACACCCCCATGTACTTCTTCCTTAGC
CACTTGGCCCTCACTGACATCTCCTTTTCATCTGTCACTGTCCCTAAGATGCTGATGAAC
ATGCAGACTCAGCACCTAGCCGTCTTTTACAAGGGATGCATTTCACAGACATATTTTTTC
ATATTTTTTGCTGACTTAGACAGTTTCCTTATCACTTCAATGGCATATGACAGGTATGTG
GCCATCTGTCATCCTCTACATTATGCCACCATCATGACTCAGAGCCAGTGTGTCATGCTG
GTGGCTGGGTCCTGGGTCATCGCTTGTGCGTGTGCTCTTTTGCATACCCTCCTCCTGGCC
CAGCTTTCCTTCTGTGCTGACCACATCATCCCTCACTACTTCTGTGACCTTGGTGCCCTG
CTCAAGTTGTCCTGCTCAGACACCTCCCTCAATCAGTTAGCAATCTTTACAGCAGCATTG
ACAGCCATTATGCTTCCATTCCTGTGCATCCTGGTTTCTTATGGTCACATTGGGGTCACC
ATCCTCCAGATTCCCTCTACCAAGGGCATATGCAAAGCCTTGTCCACTTGTGGATCCCAC
CTCTCAGTGGTGACTATCTATTATCGGACAATTATTGGTCTCTATTTTCTTCCCCCATCC
AGCAACACCAATGACAAGAACATAATTGCTTCAGTGATATACACAGCAGTCACTCCCATG
TTGAACCCATTCATTTACAGTCTGAGAAATAAAGACATTAAGGGAGCCCTAAGAAAACTC
TTGAGTAGGTCAGGCGCAGTGGCTCATGCCTGTAATCTCAACACTTTGGGAGGCGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT