HOXA2 ORF clone FXC03127

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC03127

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Clone info.

Species

human

Clone Name

pF1KB8980 Sequence (with vector) Restriction Map

Product ID

FXC03127

HaloTag Clone PID

FHC03127

ORF Sequence

DNA sequence (1128 bp)
Protein sequence (376 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464572]

Gene

KIBB8980

Symbol

HOXA2

Alias : HOX1K, MCOHI

Description

homeobox A2

Original Clone ID

cp01015

Features of the cloned ORF sequence

Description

Length: 1128 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 376 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5403.1 6e-93 100.0 HOXA2 CCDS11527.1 1.6e-28 50.3 HOXB2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 165 176 PR00024 Homeobox IPR020479 180 190 PR00024 Homeobox IPR020479 190 199 PR00024 Homeobox HMMPfam IPR001356 144 200 PF00046 Homeobox HMMSmart IPR001356 143 205 SM00389 Homeobox ProfileScan IPR001356 141 201 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006726 376 604685,612290 100.0 100.0 NP_002136 356 142967 50.3 98.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8980 Download

>KIBB8980  1128 bp
ATGAATTACGAATTTGAGCGAGAGATTGGTTTTATCAATAGCCAGCCGTCGCTCGCTGAG
TGCCTGACATCTTTTCCCCCTGTCGCTGATACATTTCAAAGTTCATCAATCAAGACCTCG
ACGCTTTCACACTCGACACTGATTCCTCCTCCTTTTGAGCAGACCATTCCCAGCCTGAAC
CCCGGCAGTCACCCTCGCCACGGCGCTGGCGGCCGCCCCAAGCCGAGCCCCGCGGGCAGC
CGCGGCAGCCCGGTGCCCGCCGGCGCCCTGCAGCCGCCCGAGTACCCCTGGATGAAGGAG
AAGAAGGCGGCCAAGAAAACCGCACTTCTGCCGGCCGCCGCCGCCGCCGCCACCGCCGCA
GCCACCGGCCCTGCTTGCCTCAGCCACAAAGAATCCCTGGAAATCGCCGATGGCAGCGGC
GGGGGATCGCGGCGCCTGAGAACTGCTTACACCAACACACAGCTTCTAGAGCTGGAAAAA
GAATTTCATTTCAACAAGTACCTTTGCAGACCCCGAAGGGTGGAGATTGCAGCGCTGCTG
GATTTGACTGAGAGACAAGTGAAAGTGTGGTTTCAGAACCGGAGGATGAAGCACAAGAGG
CAGACCCAGTGCAAGGAAAACCAAAACAGCGAAGGGAAATGTAAAAGCCTTGAGGACTCC
GAGAAAGTAGAGGAGGACGAGGAAGAGAAGACGCTCTTTGAGCAAGCCCTTAGCGTCTCT
GGGGCCCTTCTGGAGAGGGAAGGCTACACTTTTCAGCAAAATGCCCTCTCTCAGCAGCAG
GCTCCCAATGGACACAATGGCGACTCCCAAAGTTTCCCAGTCTCGCCTTTAACCAGCAAT
GAGAAAAATCTGAAACATTTTCAGCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACA
ATGGGCCAGAACTGTGGAGCTGGCCTAAACAATGACAGTCCTGAGGCCCTTGAGGTCCCC
TCTTTGCAGGACTTTAGCGTTTTCTCCACAGATTCCTGCCTGCAGCTTTCAGATGCAGTT
TCACCCAGTTTGCCAGGTTCCCTCGACAGTCCCGTAGATATTTCAGCTGACAGCTTAGAC
TTTTTTACAGACACACTCACCACAATCGACTTGCAGCATCTGAATTAC

ORF Protein

Cloned ORF protein sequence for pF1KB8980 Download

>KIBB8980  376 aa
MNYEFEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLN
PGSHPRHGAGGRPKPSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALLPAAAAAATAA
ATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALL
DLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCKSLEDSEKVEEDEEEKTLFEQALSVS
GALLEREGYTFQQNALSQQQAPNGHNGDSQSFPVSPLTSNEKNLKHFQHQSPTVPNCLST
MGQNCGAGLNNDSPEALEVPSLQDFSVFSTDSCLQLSDAVSPSLPGSLDSPVDISADSLD
FFTDTLTTIDLQHLNY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8980 Download

>pF1KB8980  4241 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAATTACGAA
TTTGAGCGAGAGATTGGTTTTATCAATAGCCAGCCGTCGCTCGCTGAGTGCCTGACATCT
TTTCCCCCTGTCGCTGATACATTTCAAAGTTCATCAATCAAGACCTCGACGCTTTCACAC
TCGACACTGATTCCTCCTCCTTTTGAGCAGACCATTCCCAGCCTGAACCCCGGCAGTCAC
CCTCGCCACGGCGCTGGCGGCCGCCCCAAGCCGAGCCCCGCGGGCAGCCGCGGCAGCCCG
GTGCCCGCCGGCGCCCTGCAGCCGCCCGAGTACCCCTGGATGAAGGAGAAGAAGGCGGCC
AAGAAAACCGCACTTCTGCCGGCCGCCGCCGCCGCCGCCACCGCCGCAGCCACCGGCCCT
GCTTGCCTCAGCCACAAAGAATCCCTGGAAATCGCCGATGGCAGCGGCGGGGGATCGCGG
CGCCTGAGAACTGCTTACACCAACACACAGCTTCTAGAGCTGGAAAAAGAATTTCATTTC
AACAAGTACCTTTGCAGACCCCGAAGGGTGGAGATTGCAGCGCTGCTGGATTTGACTGAG
AGACAAGTGAAAGTGTGGTTTCAGAACCGGAGGATGAAGCACAAGAGGCAGACCCAGTGC
AAGGAAAACCAAAACAGCGAAGGGAAATGTAAAAGCCTTGAGGACTCCGAGAAAGTAGAG
GAGGACGAGGAAGAGAAGACGCTCTTTGAGCAAGCCCTTAGCGTCTCTGGGGCCCTTCTG
GAGAGGGAAGGCTACACTTTTCAGCAAAATGCCCTCTCTCAGCAGCAGGCTCCCAATGGA
CACAATGGCGACTCCCAAAGTTTCCCAGTCTCGCCTTTAACCAGCAATGAGAAAAATCTG
AAACATTTTCAGCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAAC
TGTGGAGCTGGCCTAAACAATGACAGTCCTGAGGCCCTTGAGGTCCCCTCTTTGCAGGAC
TTTAGCGTTTTCTCCACAGATTCCTGCCTGCAGCTTTCAGATGCAGTTTCACCCAGTTTG
CCAGGTTCCCTCGACAGTCCCGTAGATATTTCAGCTGACAGCTTAGACTTTTTTACAGAC
ACACTCACCACAATCGACTTGCAGCATCTGAATTACGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT