FOXA3 ORF clone FXC03119

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Flexi ORF Clone FXC03119

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Clone info.

Species

human

Clone Name

pF1KB8964 Sequence (with vector) Restriction Map

Product ID

FXC03119

HaloTag Clone PID

FHC03119

ORF Sequence

DNA sequence (1050 bp)
Protein sequence (350 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464526]

Gene

KIBB8964

Symbol

FOXA3

Alias : FKHH3, HNF3G, TCF3G

Description

forkhead box A3

Original Clone ID

cp00999

Features of the cloned ORF sequence

Description

Length: 1050 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 350 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12677.1 3.8e-74 100.0 FOXA3 CCDS9665.1 7.1e-20 46.2 FOXA1 CCDS13147.1 8.7e-20 44.0 FOXA2 CCDS46585.1 8.8e-20 44.0 FOXA2 CCDS75259.1 1.4e-15 43.4 FOXD1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001766 117 130 PR00053 Transcription factor IPR001766 138 155 PR00053 Transcription factor IPR001766 161 178 PR00053 Transcription factor HMMPfam IPR013638 16 116 PF08430 Fork-head N-terminal IPR001766 117 212 PF00250 Transcription factor IPR018533 301 322 PF09354 Forkhead box protein HMMSmart IPR001766 115 205 SM00339 Transcription factor ProfileScan IPR001766 117 211 PS50039 Transcription factor
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004488 350 602295 100.0 100.0 XP_016876735 439 602294 46.2 86.6 NP_004487 472 602294 46.2 86.6 NP_710141 457 600288 44.0 86.0 NP_068556 463 600288 44.0 86.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8964 Download

>KIBB8964  1050 bp
ATGCTGGGCTCAGTGAAGATGGAGGCCCATGACCTGGCCGAGTGGAGCTACTACCCGGAG
GCGGGCGAGGTCTACTCGCCGGTGACCCCAGTGCCCACCATGGCCCCCCTCAACTCCTAC
ATGACCCTGAATCCTCTAAGCTCTCCCTATCCCCCTGGGGGGCTCCCTGCCTCCCCACTG
CCCTCAGGACCCCTGGCACCCCCAGCACCTGCAGCCCCCCTGGGGCCCACTTTCCCAGGC
CTGGGTGTCAGCGGTGGCAGCAGCAGCTCCGGGTACGGGGCCCCGGGTCCTGGGCTGGTG
CACGGGAAGGAGATGCCGAAGGGGTATCGGCGGCCCCTGGCACACGCCAAGCCACCGTAT
TCCTATATCTCACTCATCACCATGGCCATCCAGCAGGCGCCGGGCAAGATGCTGACCTTG
AGTGAAATCTACCAGTGGATCATGGACCTCTTCCCTTACTACCGGGAGAATCAGCAGCGC
TGGCAGAACTCCATTCGCCACTCGCTGTCTTTCAACGACTGCTTCGTCAAGGTGGCGCGT
TCCCCAGACAAGCCTGGCAAGGGCTCCTACTGGGCCCTACACCCCAGCTCAGGGAACATG
TTTGAGAATGGCTGCTACCTGCGCCGCCAGAAACGCTTCAAGCTGGAGGAGAAGGTGAAA
AAAGGGGGCAGCGGGGCTGCCACCACCACCAGGAACGGGACAGGGTCTGCTGCCTCGACC
ACCACCCCCGCGGCCACAGTCACCTCCCCGCCCCAGCCCCCGCCTCCAGCCCCTGAGCCT
GAGGCCCAGGGCGGGGAAGATGTGGGGGCTCTGGACTGTGGCTCACCCGCTTCCTCCACA
CCCTATTTCACTGGCCTGGAGCTCCCAGGGGAGCTGAAGCTGGACGCGCCCTACAACTTC
AACCACCCTTTCTCCATCAACAACCTAATGTCAGAACAGACACCAGCACCTCCCAAACTG
GACGTGGGGTTTGGGGGCTACGGGGCTGAAGGTGGGGAGCCTGGAGTCTACTACCAGGGC
CTCTATTCCCGCTCTTTGCTTAATGCATCC

ORF Protein

Cloned ORF protein sequence for pF1KB8964 Download

>KIBB8964  350 aa
MLGSVKMEAHDLAEWSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPPGGLPASPL
PSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPY
SYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVAR
SPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAAST
TTPAATVTSPPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPYNF
NHPFSINNLMSEQTPAPPKLDVGFGGYGAEGGEPGVYYQGLYSRSLLNAS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8964 Download

>pF1KB8964  4163 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGGGCTCA
GTGAAGATGGAGGCCCATGACCTGGCCGAGTGGAGCTACTACCCGGAGGCGGGCGAGGTC
TACTCGCCGGTGACCCCAGTGCCCACCATGGCCCCCCTCAACTCCTACATGACCCTGAAT
CCTCTAAGCTCTCCCTATCCCCCTGGGGGGCTCCCTGCCTCCCCACTGCCCTCAGGACCC
CTGGCACCCCCAGCACCTGCAGCCCCCCTGGGGCCCACTTTCCCAGGCCTGGGTGTCAGC
GGTGGCAGCAGCAGCTCCGGGTACGGGGCCCCGGGTCCTGGGCTGGTGCACGGGAAGGAG
ATGCCGAAGGGGTATCGGCGGCCCCTGGCACACGCCAAGCCACCGTATTCCTATATCTCA
CTCATCACCATGGCCATCCAGCAGGCGCCGGGCAAGATGCTGACCTTGAGTGAAATCTAC
CAGTGGATCATGGACCTCTTCCCTTACTACCGGGAGAATCAGCAGCGCTGGCAGAACTCC
ATTCGCCACTCGCTGTCTTTCAACGACTGCTTCGTCAAGGTGGCGCGTTCCCCAGACAAG
CCTGGCAAGGGCTCCTACTGGGCCCTACACCCCAGCTCAGGGAACATGTTTGAGAATGGC
TGCTACCTGCGCCGCCAGAAACGCTTCAAGCTGGAGGAGAAGGTGAAAAAAGGGGGCAGC
GGGGCTGCCACCACCACCAGGAACGGGACAGGGTCTGCTGCCTCGACCACCACCCCCGCG
GCCACAGTCACCTCCCCGCCCCAGCCCCCGCCTCCAGCCCCTGAGCCTGAGGCCCAGGGC
GGGGAAGATGTGGGGGCTCTGGACTGTGGCTCACCCGCTTCCTCCACACCCTATTTCACT
GGCCTGGAGCTCCCAGGGGAGCTGAAGCTGGACGCGCCCTACAACTTCAACCACCCTTTC
TCCATCAACAACCTAATGTCAGAACAGACACCAGCACCTCCCAAACTGGACGTGGGGTTT
GGGGGCTACGGGGCTGAAGGTGGGGAGCCTGGAGTCTACTACCAGGGCCTCTATTCCCGC
TCTTTGCTTAATGCATCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA
AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC
TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA
AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC
GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC
ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA
ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG
GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG
GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG
CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA
GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT
CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT