OR13C4 ORF clone FXC02446

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Flexi ORF Clone FXC02446

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Clone info.

Species

human

Clone Name

pF1KB7419 Sequence (with vector) Restriction Map

Product ID

FXC02446

HaloTag Clone PID

FHC02446

ORF Sequence

DNA sequence (954 bp)
Protein sequence (318 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463956]

Gene

KIBB7419

Symbol

OR13C4

Alias : HSHTPCRX17, HTPCRX17, OR2K1, OR37F, OR9-7

Description

olfactory receptor, family 13, subfamily C, member 4

Original Clone ID

oc00633

Features of the cloned ORF sequence

Description

Length: 954 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 318 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35088.1 8.7e-80 100.0 OR13C4 CCDS35089.1 4.2e-69 83.9 OR13C3 CCDS35092.1 2.6e-53 65.3 OR13C2 CCDS35093.1 3.2e-53 65.6 OR13C9 CCDS6596.2 7.5e-53 64.6 OR2S2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 278 304 PR00237 GPCR IPR000725 289 300 PR00245 Olfactory receptor HMMPfam IPR000276 41 296 PF00001 GPCR ProfileScan IPR017452 41 296 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 33 VMYVVILIGNGVLIIASILDSRL 55 PRIMARY 23 2 98 AVQMFFGFAMGSTECFLLGMMAF 120 SECONDARY 23 3 132 YPIIMNKVVYVLLTSVSWLSGGI 154 SECONDARY 23 4 175 NHFLCEILAVLKLACSDISVNIV 197 SECONDARY 23 5 205 AFLVLPLLVIFFSYMFILYTILR 227 PRIMARY 23 6 237 AFSTCSAHLTVVIIFYGTIFFM 258 PRIMARY 22 7 278 GLVSMFYGVVTPMLNPIIYSLR 299 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001005216 311 615016,615082 46.3 97.2 XP_011514322 317 608497 48.9 97.8 NP_036501 317 608497 48.9 97.8 XP_011514321 317 608497 48.9 97.8 NP_009091 312 600578 45.7 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7419 Download

>KIBB7419  954 bp
ATGGACAAGATAAACCAGACATTTGTGAGAGAATTCATTCTTCTGGGACTCTCTGGTTAC
CCCAAACTTGAGATCATTTTCTTTGCTCTGATTCTAGTTATGTACGTAGTGATTCTAATT
GGCAATGGTGTTCTGATCATAGCAAGCATCTTGGATTCTCGTCTTCACATGCCCATGTAC
TTCTTCCTGGGCAACCTCTCTTTCCTGGATATCTGCTATACAACCTCCTCCATTCCCTCA
ACACTGGTGAGCTTAATCTCAAAGAAAAGAAACATTTCCTTCTCTGGATGTGCAGTGCAG
ATGTTCTTTGGGTTTGCAATGGGGTCAACAGAATGTTTCCTCCTTGGCATGATGGCATTT
GATCGTTATGTGGCCATCTGTAACCCTCTGAGATACCCCATCATCATGAACAAGGTGGTG
TATGTACTGCTGACTTCTGTATCATGGCTTTCTGGTGGAATCAATTCAACTGTGCAAACA
TCACTTGCCATGCGATGGCCTTTCTGTGGGAACAATATTATTAATCATTTCTTATGCGAG
ATCTTAGCTGTCCTAAAATTAGCTTGTTCTGATATATCTGTCAATATTGTTACCCTAGCA
GTGTCAAATATTGCTTTCCTAGTTCTTCCTCTGCTCGTGATTTTTTTCTCCTATATGTTC
ATCCTCTACACCATCTTGCGAACGAACTCGGCCACAGGAAGACACAAGGCATTTTCTACA
TGCTCAGCTCACCTGACTGTGGTGATCATATTTTATGGTACCATCTTCTTTATGTATGCA
AAACCTAAGTCCCAGGACCTCCTTGGGAAAGACAACTTGCAAGCTACAGAGGGGCTTGTT
TCCATGTTTTATGGGGTTGTGACCCCCATGTTAAACCCCATAATCTATAGCTTGAGAAAT
AAAGATGTAAAAGCTGCTATAAAATATTTGCTGAGCAGGAAAGCTATTAACCAG

ORF Protein

Cloned ORF protein sequence for pF1KB7419 Download

>KIBB7419  318 aa
MDKINQTFVREFILLGLSGYPKLEIIFFALILVMYVVILIGNGVLIIASILDSRLHMPMY
FFLGNLSFLDICYTTSSIPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTECFLLGMMAF
DRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHFLCE
ILAVLKLACSDISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKAFST
CSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNPIIYSLRN
KDVKAAIKYLLSRKAINQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7419 Download

>pF1KB7419  4067 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGACAAGATA
AACCAGACATTTGTGAGAGAATTCATTCTTCTGGGACTCTCTGGTTACCCCAAACTTGAG
ATCATTTTCTTTGCTCTGATTCTAGTTATGTACGTAGTGATTCTAATTGGCAATGGTGTT
CTGATCATAGCAAGCATCTTGGATTCTCGTCTTCACATGCCCATGTACTTCTTCCTGGGC
AACCTCTCTTTCCTGGATATCTGCTATACAACCTCCTCCATTCCCTCAACACTGGTGAGC
TTAATCTCAAAGAAAAGAAACATTTCCTTCTCTGGATGTGCAGTGCAGATGTTCTTTGGG
TTTGCAATGGGGTCAACAGAATGTTTCCTCCTTGGCATGATGGCATTTGATCGTTATGTG
GCCATCTGTAACCCTCTGAGATACCCCATCATCATGAACAAGGTGGTGTATGTACTGCTG
ACTTCTGTATCATGGCTTTCTGGTGGAATCAATTCAACTGTGCAAACATCACTTGCCATG
CGATGGCCTTTCTGTGGGAACAATATTATTAATCATTTCTTATGCGAGATCTTAGCTGTC
CTAAAATTAGCTTGTTCTGATATATCTGTCAATATTGTTACCCTAGCAGTGTCAAATATT
GCTTTCCTAGTTCTTCCTCTGCTCGTGATTTTTTTCTCCTATATGTTCATCCTCTACACC
ATCTTGCGAACGAACTCGGCCACAGGAAGACACAAGGCATTTTCTACATGCTCAGCTCAC
CTGACTGTGGTGATCATATTTTATGGTACCATCTTCTTTATGTATGCAAAACCTAAGTCC
CAGGACCTCCTTGGGAAAGACAACTTGCAAGCTACAGAGGGGCTTGTTTCCATGTTTTAT
GGGGTTGTGACCCCCATGTTAAACCCCATAATCTATAGCTTGAGAAATAAAGATGTAAAA
GCTGCTATAAAATATTTGCTGAGCAGGAAAGCTATTAACCAGGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGT
ATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAA
GAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGC
GTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAG
GTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGG
AAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCG
CTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGG
TAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCAC
TGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGT
TACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGG
TGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCC
TTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTT
GGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT