OR52A1 ORF clone FXC02268

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC02268

How to Order Order Information

Clone info.

Species

human

Clone Name

pF1KB7125 Sequence (with vector) Restriction Map

Product ID

FXC02268

HaloTag Clone PID

FHC02268

ORF Sequence

DNA sequence (936 bp)
Protein sequence (312 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463975]

Gene

KIBB7125

Symbol

OR52A1

Alias : HPFH1OR

Description

olfactory receptor, family 52, subfamily A, member 1

Original Clone ID

cp01130

Features of the cloned ORF sequence

Description

Length: 936 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 312 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31374.1 7.4e-92 99.7 OR52A1 CCDS31373.1 1.1e-70 75.2 OR52A5 CCDS31371.1 3.3e-46 50.3 OR52E2 CCDS44528.1 5.6e-46 50.5 OR52N4 CCDS31400.1 1.1e-45 50.6 OR52E8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 28 52 PR00237 GPCR IPR000276 61 82 PR00237 GPCR IPR000725 94 105 PR00245 Olfactory receptor IPR000276 106 128 PR00237 GPCR IPR000725 131 143 PR00245 Olfactory receptor IPR000725 179 195 PR00245 Olfactory receptor IPR000725 239 248 PR00245 Olfactory receptor IPR000276 277 303 PR00237 GPCR IPR000725 288 299 PR00245 Olfactory receptor HMMPfam IPR000276 43 295 PF00001 GPCR ProfileScan IPR017452 43 295 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MSISNITVYMPSVLTLVGIPGLE 23 PRIMARY 23 2 29 IGIPFCAIYLIAMIGNSLLLSII 51 PRIMARY 23 3 57 LHEPLYIFLGMLGATDIALASSI 79 SECONDARY 23 4 83 MLGIFWFNVPEIYFDSCLLQMWF 105 SECONDARY 23 5 110 QGIESGILVAMALDRYVAICYPL 132 SECONDARY 23 6 145 QIGTMVVLRAAILVAPCLVLIK 166 PRIMARY 22 7 205 VAFTVAGFDLTFITLSYIQIFIT 227 PRIMARY 23 8 241 FNTCIAHICVFLQFYLLAFFSFF 263 PRIMARY 23 9 265 HRFGSHIPPYIHILFSSIYLLVP 287 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110401 320 611268 48.7 99.4 NP_689643 318 611267 47.7 95.8 NP_001005191 312 611538 31.6 93.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7125 Download

>KIBB7125  936 bp
ATGTCCATTTCCAACATCACAGTCTACATGCCCTCTGTGTTGACACTAGTAGGGATCCCA
GGCCTAGAATCTGTGCAGTGCTGGATTGGGATTCCATTCTGTGCCATTTATCTCATTGCT
ATGATTGGAAATTCCTTGCTTCTGAGCATCATCAAATCTGAGCGCAGTCTCCATGAGCCC
TTGTACATTTTCTTAGGCATGCTAGGAGCCACAGACATTGCACTTGCTAGCAGCATTATG
CCAAAGATGCTTGGAATATTCTGGTTTAATGTGCCTGAAATCTATTTTGATTCCTGCTTG
CTTCAAATGTGGTTCATCCACACATTGCAGGGTATAGAGTCAGGCATCCTTGTGGCCATG
GCCCTGGACCGTTATGTGGCCATCTGTTATCCACTAAGACATGCCAACATCTTCACCCAC
CAGCTTGTCATTCAGATAGGAACTATGGTCGTACTCAGGGCTGCTATTCTTGTAGCCCCA
TGCCTAGTACTGATAAAGTGCCGGTTTCAATTTTATCACACAACAGTCATCTCCCACTCC
TACTGTGAGCATATGGCCATTGTGAAACTAGCAGCAGCAAATGTTCAAGTCAACAAAATC
TATGGTTTGTTTGTGGCCTTCACTGTAGCAGGATTTGACCTCACATTCATCACATTGTCC
TACATCCAGATATTTATCACAGTTTTTCGTTTGCCCCAGAAGGAGGCTAGGTTTAAAGCA
TTCAATACCTGCATTGCTCACATCTGTGTCTTCCTCCAGTTCTACCTCCTTGCCTTCTTC
TCCTTCTTCACACATAGGTTTGGGTCTCACATCCCCCCTTATATCCATATTCTCTTTTCT
AGCATTTACTTGCTGGTCCCTCCATTTCTCAATCCACTTGTCTATGGTGCAAAGACCACA
CAGATTCGCATTCATGTGGTAAAAATGTTCTGTTCA

ORF Protein

Cloned ORF protein sequence for pF1KB7125 Download

>KIBB7125  312 aa
MSISNITVYMPSVLTLVGIPGLESVQCWIGIPFCAIYLIAMIGNSLLLSIIKSERSLHEP
LYIFLGMLGATDIALASSIMPKMLGIFWFNVPEIYFDSCLLQMWFIHTLQGIESGILVAM
ALDRYVAICYPLRHANIFTHQLVIQIGTMVVLRAAILVAPCLVLIKCRFQFYHTTVISHS
YCEHMAIVKLAAANVQVNKIYGLFVAFTVAGFDLTFITLSYIQIFITVFRLPQKEARFKA
FNTCIAHICVFLQFYLLAFFSFFTHRFGSHIPPYIHILFSSIYLLVPPFLNPLVYGAKTT
QIRIHVVKMFCS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7125 Download

>pF1KB7125  4049 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCATTTCC
AACATCACAGTCTACATGCCCTCTGTGTTGACACTAGTAGGGATCCCAGGCCTAGAATCT
GTGCAGTGCTGGATTGGGATTCCATTCTGTGCCATTTATCTCATTGCTATGATTGGAAAT
TCCTTGCTTCTGAGCATCATCAAATCTGAGCGCAGTCTCCATGAGCCCTTGTACATTTTC
TTAGGCATGCTAGGAGCCACAGACATTGCACTTGCTAGCAGCATTATGCCAAAGATGCTT
GGAATATTCTGGTTTAATGTGCCTGAAATCTATTTTGATTCCTGCTTGCTTCAAATGTGG
TTCATCCACACATTGCAGGGTATAGAGTCAGGCATCCTTGTGGCCATGGCCCTGGACCGT
TATGTGGCCATCTGTTATCCACTAAGACATGCCAACATCTTCACCCACCAGCTTGTCATT
CAGATAGGAACTATGGTCGTACTCAGGGCTGCTATTCTTGTAGCCCCATGCCTAGTACTG
ATAAAGTGCCGGTTTCAATTTTATCACACAACAGTCATCTCCCACTCCTACTGTGAGCAT
ATGGCCATTGTGAAACTAGCAGCAGCAAATGTTCAAGTCAACAAAATCTATGGTTTGTTT
GTGGCCTTCACTGTAGCAGGATTTGACCTCACATTCATCACATTGTCCTACATCCAGATA
TTTATCACAGTTTTTCGTTTGCCCCAGAAGGAGGCTAGGTTTAAAGCATTCAATACCTGC
ATTGCTCACATCTGTGTCTTCCTCCAGTTCTACCTCCTTGCCTTCTTCTCCTTCTTCACA
CATAGGTTTGGGTCTCACATCCCCCCTTATATCCATATTCTCTTTTCTAGCATTTACTTG
CTGGTCCCTCCATTTCTCAATCCACTTGTCTATGGTGCAAAGACCACACAGATTCGCATT
CATGTGGTAAAAATGTTCTGTTCAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT