C1QTNF6 ORF clone FXC02142

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Flexi ORF Clone FXC02142

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Clone info.

Species

human

Clone Name

pF1KB4609 Sequence (with vector) Restriction Map

Product ID

FXC02142

HaloTag Clone PID

FHC02142

ORF Sequence

DNA sequence (834 bp)
Protein sequence (278 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB462967]

Gene

KIBB4609

Symbol

C1QTNF6

Alias : CTFP6, CTRP6, ZACRP6

Description

C1q and tumor necrosis factor related protein 6, transcript variant 1

Original Clone ID

oc00025

Features of the cloned ORF sequence

Description

Length: 834 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 278 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13943.1 1.8e-90 99.3 C1QTNF6 CCDS32358.1 5.4e-36 54.5 C1QTNF8 CCDS11762.1 4.3e-32 58.8 C1QTNF1 CCDS11761.1 5.6e-32 54.1 C1QTNF1 CCDS3284.1 1.3e-11 31.8 ADIPOQ The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001073 156 182 PR00007 Complement C1q protein IPR001073 183 202 PR00007 Complement C1q protein IPR001073 228 249 PR00007 Complement C1q protein IPR001073 264 274 PR00007 Complement C1q protein HMMPfam IPR008160 97 138 PF01391 Collagen triple helix repeat IPR001073 145 273 PF00386 Complement C1q protein HMMSmart IPR001073 136 276 SM00110 Complement C1q protein ProfileScan IPR001073 139 278 PS50871 Complement C1q protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 19 TMVTAALGPVWAALLLFLLMCEI 41 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_872292 278 614910 99.3 100.0 NP_114116 278 614910 99.3 100.0 XP_016884058 278 614910 94.6 100.0 XP_016884060 259 614910 99.2 93.2 XP_011528159 259 614910 99.2 93.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB4609 Download

>KIBB4609  834 bp
ATGCAGTGGCTCAGGGTCCGTGAGTCGCCTGGGGAGGCCACAGGACACAGGGTCACCATG
GTGACAGCCGCCCTGGGTCCCGTCTGGGCAGCGCTCCTGCTCTTTCTCCTGATGTGTGAG
ATCCGTATGGTGGAGCTCACCTTTGACAGAGCTGTGGCCAGCGGCTGCCAACGGTGCTGT
GACTCTGAGGACCCCCTGGATCCTGCCCATGTATCCTCAGCCTCTTCCTCCGGCCGCCCC
CACGCCCTGCCTGAGATCAGACCCTACATTAATATCACCATCCTGAAGGGTGACAAAGGG
GACCCAGGCCCAATGGGCCTGCCAGGGTACATGGGCAGGGAGGGTCCCCAAGGGGAGCCT
GGCCCTCAGGGCAGCAAGGGTGACAAGGGGGAGATGGGCAGCCCCGGCGCCCCGTGCCAG
AAGCGCTTCTTCGCCTTCTCAGTGGGCCGCAAGACGGCCCTGCACAGCGGCGAGGACTTC
CAGACGCTGCTCTTCGAAAGGGTCTTTGTGAACCTTGATGGGTGCTTTGACATGGCGACC
GGCCAGTTTGCTGCTCCCCTGCGTGGCATCTACTTCTTCAGCCTCAATGTGCACAGCTGG
AATTACAAGGAGACGTACGTGCACATTATGCATAACCAGAAAGAGGCTGTCATCCTGTAC
GCGCAGCCCAGCGAGCGCAGCATCATGCAGAGCCAGAGTGTGATGCTGGACCTGGCCTAC
GGGGACCGCGTCTGGGTGCGGCTCTTCAAGCGCCAGCGCGAGAACGCCATCTACAGCAAC
GACTTCGACACCTACATCACCTTCAGCGGCCACCTCATCAAGGCCGAGGACGAC

ORF Protein

Cloned ORF protein sequence for pF1KB4609 Download

>KIBB4609  278 aa
MQWLRVRESPGEATGHRVTMVTAALGPVWAALLLFLLMCEIRMVELTFDRAVASGCQRCC
DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP
GPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMAT
GQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAY
GDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAEDD

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB4609 Download

>pF1KB4609  3947 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCAGTGGCTC
AGGGTCCGTGAGTCGCCTGGGGAGGCCACAGGACACAGGGTCACCATGGTGACAGCCGCC
CTGGGTCCCGTCTGGGCAGCGCTCCTGCTCTTTCTCCTGATGTGTGAGATCCGTATGGTG
GAGCTCACCTTTGACAGAGCTGTGGCCAGCGGCTGCCAACGGTGCTGTGACTCTGAGGAC
CCCCTGGATCCTGCCCATGTATCCTCAGCCTCTTCCTCCGGCCGCCCCCACGCCCTGCCT
GAGATCAGACCCTACATTAATATCACCATCCTGAAGGGTGACAAAGGGGACCCAGGCCCA
ATGGGCCTGCCAGGGTACATGGGCAGGGAGGGTCCCCAAGGGGAGCCTGGCCCTCAGGGC
AGCAAGGGTGACAAGGGGGAGATGGGCAGCCCCGGCGCCCCGTGCCAGAAGCGCTTCTTC
GCCTTCTCAGTGGGCCGCAAGACGGCCCTGCACAGCGGCGAGGACTTCCAGACGCTGCTC
TTCGAAAGGGTCTTTGTGAACCTTGATGGGTGCTTTGACATGGCGACCGGCCAGTTTGCT
GCTCCCCTGCGTGGCATCTACTTCTTCAGCCTCAATGTGCACAGCTGGAATTACAAGGAG
ACGTACGTGCACATTATGCATAACCAGAAAGAGGCTGTCATCCTGTACGCGCAGCCCAGC
GAGCGCAGCATCATGCAGAGCCAGAGTGTGATGCTGGACCTGGCCTACGGGGACCGCGTC
TGGGTGCGGCTCTTCAAGCGCCAGCGCGAGAACGCCATCTACAGCAACGACTTCGACACC
TACATCACCTTCAGCGGCCACCTCATCAAGGCCGAGGACGACGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGA
CTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACG
TGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAA
TCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGT
GGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAG
AGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAA
CTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAG
TGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCA
GCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACAC
CGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAA
GGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCC
AGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCG
TCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGC
CTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATC
CCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT