FGD1 ORF clone FXC01312

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Flexi ORF Clone FXC01312

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Clone info.

Species

human

Clone Name

pF1KB3681 Sequence (with vector) Restriction Map

Product ID

FXC01312

HaloTag Clone PID

FHC01312

ORF Sequence

DNA sequence (2685 bp)
Protein sequence (895 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384834]

Gene

KIBB3681

Symbol

FGD1

Alias : AAS, FGDY, MRXS16, ZFYVE3

Description

FYVE, RhoGEF and PH domain containing 1

Original Clone ID

hk02922

Features of the cloned ORF sequence

Description

Length: 2685 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 895 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14359.1 6.9e-67 92.9 FGD1 CCDS4829.1 1.4e-25 42.6 FGD2 CCDS43849.1 8e-24 41.6 FGD3 CCDS69619.1 1.4e-23 41.6 FGD3 CCDS81679.1 1.5e-22 44.3 FGD4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000219 377 429 PF00621 Dbl homology (DH) domain IPR000219 429 493 PF00621 Dbl homology (DH) domain IPR001849 525 620 PF00169 Pleckstrin homology domain IPR000306 663 723 PF01363 Zinc finger IPR001849 759 850 PF00169 Pleckstrin homology domain HMMSmart IPR000219 377 494 SM00325 Dbl homology (DH) domain IPR001849 525 625 SM00233 Pleckstrin homology domain IPR000306 656 725 SM00064 Zinc finger IPR001849 756 857 SM00233 Pleckstrin homology domain ProfileScan IPR000219 402 495 PS50010 Dbl homology (DH) domain IPR001849 524 623 PS50003 Pleckstrin homology domain IPR017455 664 724 PS50178 Zinc finger IPR001849 755 855 PS50003 Pleckstrin homology domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004454 961 300546,305400 92.9 96.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3681 Download

>KIBB3681  2685 bp
ATGCATGGCCACCGAGCCCCGGGGGGCGCCGGGCCTTCGGAGCCCGAACACCCGGCCACG
AACCCGCCGGGCGCCGCTCCGCCGGCCTGTGCCGACTCGGACCCTGGAGCCTCGGAACCC
GGACTGCTGGCGCGCAGGGGCTCAGGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTT
GTCGGACCCTCGGACACCAGCCTGGGCGCTGCTCCAGGCCACCGGGTCTTGCCCTGCGGT
CCCAGTCCACAGCACCACCGGGCCCTGCGCTTCTCTTACCACCTGGAGGGCTCGCAGCCT
CGGCCTGGGCTGCACCAGGGAAACCGGATCCTGGTTAAAAGTTTGTCCCTTGACCCTGGC
CAAAGCCTAGAGCCTCATCCAGAAGGTCCCCAGCGGCTTCGCTCAGACCCAGGTCCCCCG
ACTGAAACCCCTAGCCAGCGTCCTTCACCACTGAAGCGGGCACCGGGCCCGAAGCCACAG
GTGCCCCCAAAGCCCAGCTACCTGCAGATGCCCCGGATGCCCCCCCCACTGGAGCCCATC
CCCCCTCCACCATCACGCCCACTGCCTGCCGACCCCCGAGTGGCCAAGGGCCTGGCTCCC
AGGGCAGAGGCCAGCCCCAGTTCTGCAGCAGTATCCTCACTGATTGAGAAGTTTGAAAGA
GAGCCTGTGATTGTCGCCTCGGATAGACCAGTCCCTGGCCCCAGCCCAGGTCCCCCAGAG
CCAGTCATGTTGCCACAGCCAACCTCGCAGCCACCAGTGCCCCAGCTCCCCGAGGGTGAG
GCCTCCCGCTGCCTGTTTCTGCTGGCTCCTGGGCCCCGGGACGGTGAGAAGGTGCCCAAC
CGGGACAGCGGCATTGATAGCATCAGCTCGCCATCCAACAGCGAGGAGACCTGCTTCGTC
AGTGATGACGGGCCCCCCAGCCACAGCCTCTGCCCTGGGCCCCCTGCCCTGGCTAGTGTG
CCTGTTGCCTTGGCCGACCCCCACCGGCCTGGCTCCCAAGAGGTTGACAGTGACCTGGAG
GAGGAGGACGACGAGGAGGAGGAGGAAGAGAAGGACAGAGAAATCCCAGTGCCCCTGATG
GAGAGACAGGAGTCTGTGGAGTTGACTGTGCAGCAAAAGGTGTTTCACATTGCCAATGAG
CTCCTGCAAACTGAGAAGGCCTACGTTTCCAGGCTCCATCTCCTGGATCAGGTGTTCTGT
GCCCGGCTGCTGGAAGAAGCTCGGAACCGCAGTTCCTTCCCGGCCGACGTTGTCCACGGC
ATCTTCTCTAACATCTGCTCCATCATCCATGAGGTGCAGAAGGAGGAAGCCTGTGGCAAC
CTGACATTGCAGCACCACATGCTGGAGCCTGTGCAGCGCATCCCCCGCTATGAGCTTCTT
CTCAAGGACTATCTGTTAAAGCTGCCCCATGGCTCCCCGGACAGCAAGGATGCCCAAAAG
TCTCTGGAGCTGATCGCCACAGCAGCAGAGCACTCGAATGCTGCCATCCGCAAAATGGAG
CGAATGCATAAGCTGCTGAAGGTATATGAGCTGTTAGGGGGCGAGGAGGACATTGTCAGC
CCCACCAAAGAGCTCATAAAAGAAGGCCACATCCTTAAGCTGTCAGCAAAGAATGGGACC
ACTCAAGACCGATACCTCATACTATTCAACGACCGCCTCCTTTACTGCGTGCCCAGGCTG
CGGCTCCTTGGCCAGAAGTTTAGCGTGCGGGCACGCATTGATGTAGATGGCATGGAGCTA
AAGGAGAGCTCCAACCTCAATCTGCCTCGAACCTTCCTGGTGTCAGGAAAGCAGCGCTCC
CTCGAGCTCCAGGCCAGGACTGAGGAGGAGAAGAAAGACTGGGTCCAGGCCATCAACTCC
ACCCTCCTGAAGCATGAACAGACGCTGGAGACTTTCAAACTGTTGAACTCAACAAACAGG
GAAGATGAAGACACCCCACCCAACTCTCCAAACGTGGATCTTGGGAAGCGGGCACCTACG
CCCATCCGGGAAAAGGAAGTCACCATGTGCATGCGCTGCCAGGAGCCCTTCAATTCTATC
ACCAAACGCAGGCACCACTGCAAGGCCTGCGGGCATGTGGTTTGTGGGAAGTGCTCCGAG
TTCCGGGCCCGCCTCGTCTATGACAACAACCGCTCCAACCGTGTGTGCACTGATTGCTAT
GTGGCCTTGCACGGGGTGCCTGGGAGCAGTCCAGCCTGCAGCCAGCATACACCCCAGCGC
CGGAGGTCCATCCTGGAGAAACAGGCCTCAGTGGCTGCAGAGAACAGCGTCATCTGCAGC
TTCCTGCACTACATGGAGAAGGGTGGCAAAGGATGGCACAAGGCATGGTTCGTGGTCCCT
GAAAATGAACCCTTGGTGCTGTATATCTACGGAGCCCCTCAGGATGTGAAAGCCCAGCGC
AGCCTGCCCCTCATTGGCTTCGAGGTGGGACCGCCCGAGGCAGGGGAGCGGCCTGACAGA
AGGCATGTCTTCAAGATCACCCAGAGCCACCTCAGCTGGTACTTCAGCCCTGAGACAGAG
GAACTACAGCGACGCTGGATGGCTGTGCTTGGCCGGGCGGGCCGAGGGGACACGTTCTGC
CCGGGGCCCACACTGTCTGAGGACAGGGAGATGGAGGAGGCACCGGTGGCTGCTTTAGGA
GCCACTGCTGAACCCCCCGAATCCCCCCAGACCCGAGACAAGACC

ORF Protein

Cloned ORF protein sequence for pF1KB3681 Download

>KIBB3681  895 aa
MHGHRAPGGAGPSEPEHPATNPPGAAPPACADSDPGASEPGLLARRGSGSALGGPLDPQF
VGPSDTSLGAAPGHRVLPCGPSPQHHRALRFSYHLEGSQPRPGLHQGNRILVKSLSLDPG
QSLEPHPEGPQRLRSDPGPPTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPRMPPPLEPI
PPPPSRPLPADPRVAKGLAPRAEASPSSAAVSSLIEKFEREPVIVASDRPVPGPSPGPPE
PVMLPQPTSQPPVPQLPEGEASRCLFLLAPGPRDGEKVPNRDSGIDSISSPSNSEETCFV
SDDGPPSHSLCPGPPALASVPVALADPHRPGSQEVDSDLEEEDDEEEEEEKDREIPVPLM
ERQESVELTVQQKVFHIANELLQTEKAYVSRLHLLDQVFCARLLEEARNRSSFPADVVHG
IFSNICSIIHEVQKEEACGNLTLQHHMLEPVQRIPRYELLLKDYLLKLPHGSPDSKDAQK
SLELIATAAEHSNAAIRKMERMHKLLKVYELLGGEEDIVSPTKELIKEGHILKLSAKNGT
TQDRYLILFNDRLLYCVPRLRLLGQKFSVRARIDVDGMELKESSNLNLPRTFLVSGKQRS
LELQARTEEEKKDWVQAINSTLLKHEQTLETFKLLNSTNREDEDTPPNSPNVDLGKRAPT
PIREKEVTMCMRCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLVYDNNRSNRVCTDCY
VALHGVPGSSPACSQHTPQRRRSILEKQASVAAENSVICSFLHYMEKGGKGWHKAWFVVP
ENEPLVLYIYGAPQDVKAQRSLPLIGFEVGPPEAGERPDRRHVFKITQSHLSWYFSPETE
ELQRRWMAVLGRAGRGDTFCPGPTLSEDREMEEAPVAALGATAEPPESPQTRDKT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3681 Download

>pF1KB3681  5798 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCATGGCCAC
CGAGCCCCGGGGGGCGCCGGGCCTTCGGAGCCCGAACACCCGGCCACGAACCCGCCGGGC
GCCGCTCCGCCGGCCTGTGCCGACTCGGACCCTGGAGCCTCGGAACCCGGACTGCTGGCG
CGCAGGGGCTCAGGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTTGTCGGACCCTCG
GACACCAGCCTGGGCGCTGCTCCAGGCCACCGGGTCTTGCCCTGCGGTCCCAGTCCACAG
CACCACCGGGCCCTGCGCTTCTCTTACCACCTGGAGGGCTCGCAGCCTCGGCCTGGGCTG
CACCAGGGAAACCGGATCCTGGTTAAAAGTTTGTCCCTTGACCCTGGCCAAAGCCTAGAG
CCTCATCCAGAAGGTCCCCAGCGGCTTCGCTCAGACCCAGGTCCCCCGACTGAAACCCCT
AGCCAGCGTCCTTCACCACTGAAGCGGGCACCGGGCCCGAAGCCACAGGTGCCCCCAAAG
CCCAGCTACCTGCAGATGCCCCGGATGCCCCCCCCACTGGAGCCCATCCCCCCTCCACCA
TCACGCCCACTGCCTGCCGACCCCCGAGTGGCCAAGGGCCTGGCTCCCAGGGCAGAGGCC
AGCCCCAGTTCTGCAGCAGTATCCTCACTGATTGAGAAGTTTGAAAGAGAGCCTGTGATT
GTCGCCTCGGATAGACCAGTCCCTGGCCCCAGCCCAGGTCCCCCAGAGCCAGTCATGTTG
CCACAGCCAACCTCGCAGCCACCAGTGCCCCAGCTCCCCGAGGGTGAGGCCTCCCGCTGC
CTGTTTCTGCTGGCTCCTGGGCCCCGGGACGGTGAGAAGGTGCCCAACCGGGACAGCGGC
ATTGATAGCATCAGCTCGCCATCCAACAGCGAGGAGACCTGCTTCGTCAGTGATGACGGG
CCCCCCAGCCACAGCCTCTGCCCTGGGCCCCCTGCCCTGGCTAGTGTGCCTGTTGCCTTG
GCCGACCCCCACCGGCCTGGCTCCCAAGAGGTTGACAGTGACCTGGAGGAGGAGGACGAC
GAGGAGGAGGAGGAAGAGAAGGACAGAGAAATCCCAGTGCCCCTGATGGAGAGACAGGAG
TCTGTGGAGTTGACTGTGCAGCAAAAGGTGTTTCACATTGCCAATGAGCTCCTGCAAACT
GAGAAGGCCTACGTTTCCAGGCTCCATCTCCTGGATCAGGTGTTCTGTGCCCGGCTGCTG
GAAGAAGCTCGGAACCGCAGTTCCTTCCCGGCCGACGTTGTCCACGGCATCTTCTCTAAC
ATCTGCTCCATCATCCATGAGGTGCAGAAGGAGGAAGCCTGTGGCAACCTGACATTGCAG
CACCACATGCTGGAGCCTGTGCAGCGCATCCCCCGCTATGAGCTTCTTCTCAAGGACTAT
CTGTTAAAGCTGCCCCATGGCTCCCCGGACAGCAAGGATGCCCAAAAGTCTCTGGAGCTG
ATCGCCACAGCAGCAGAGCACTCGAATGCTGCCATCCGCAAAATGGAGCGAATGCATAAG
CTGCTGAAGGTATATGAGCTGTTAGGGGGCGAGGAGGACATTGTCAGCCCCACCAAAGAG
CTCATAAAAGAAGGCCACATCCTTAAGCTGTCAGCAAAGAATGGGACCACTCAAGACCGA
TACCTCATACTATTCAACGACCGCCTCCTTTACTGCGTGCCCAGGCTGCGGCTCCTTGGC
CAGAAGTTTAGCGTGCGGGCACGCATTGATGTAGATGGCATGGAGCTAAAGGAGAGCTCC
AACCTCAATCTGCCTCGAACCTTCCTGGTGTCAGGAAAGCAGCGCTCCCTCGAGCTCCAG
GCCAGGACTGAGGAGGAGAAGAAAGACTGGGTCCAGGCCATCAACTCCACCCTCCTGAAG
CATGAACAGACGCTGGAGACTTTCAAACTGTTGAACTCAACAAACAGGGAAGATGAAGAC
ACCCCACCCAACTCTCCAAACGTGGATCTTGGGAAGCGGGCACCTACGCCCATCCGGGAA
AAGGAAGTCACCATGTGCATGCGCTGCCAGGAGCCCTTCAATTCTATCACCAAACGCAGG
CACCACTGCAAGGCCTGCGGGCATGTGGTTTGTGGGAAGTGCTCCGAGTTCCGGGCCCGC
CTCGTCTATGACAACAACCGCTCCAACCGTGTGTGCACTGATTGCTATGTGGCCTTGCAC
GGGGTGCCTGGGAGCAGTCCAGCCTGCAGCCAGCATACACCCCAGCGCCGGAGGTCCATC
CTGGAGAAACAGGCCTCAGTGGCTGCAGAGAACAGCGTCATCTGCAGCTTCCTGCACTAC
ATGGAGAAGGGTGGCAAAGGATGGCACAAGGCATGGTTCGTGGTCCCTGAAAATGAACCC
TTGGTGCTGTATATCTACGGAGCCCCTCAGGATGTGAAAGCCCAGCGCAGCCTGCCCCTC
ATTGGCTTCGAGGTGGGACCGCCCGAGGCAGGGGAGCGGCCTGACAGAAGGCATGTCTTC
AAGATCACCCAGAGCCACCTCAGCTGGTACTTCAGCCCTGAGACAGAGGAACTACAGCGA
CGCTGGATGGCTGTGCTTGGCCGGGCGGGCCGAGGGGACACGTTCTGCCCGGGGCCCACA
CTGTCTGAGGACAGGGAGATGGAGGAGGCACCGGTGGCTGCTTTAGGAGCCACTGCTGAA
CCCCCCGAATCCCCCCAGACCCGAGACAAGACCGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAG
GATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTC
GTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTT
TCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTT
GCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGAT
ACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGC
ACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAA
GTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGG
CTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAG
ATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAG
GTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAA
CGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTT
GTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACG
GTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTC
TGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT