NLGN3 ORF clone FXC00238

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Flexi ORF Clone FXC00238

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Clone info.

Species

human

Clone Name

pF1KA1480 Sequence (with vector) Restriction Map

Product ID

FXC00238

HaloTag Clone PID

FHC00238

ORF Sequence

DNA sequence (2424 bp)
Protein sequence (808 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384609]

Gene

KIAA1480

Symbol

NLGN3

Alias : HNL3

Description

neuroligin 3, transcript variant 3

Original Clone ID

cp01186

Features of the cloned ORF sequence

Description

Length: 2424 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 808 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS55442.1 0 100.0 NLGN3 CCDS14407.1 2.1e-217 97.6 NLGN3 CCDS55441.1 3.7e-217 95.2 NLGN3 CCDS14126.1 4e-200 75.1 NLGN4X CCDS14788.1 1.6e-197 73.1 NLGN4Y The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000460 430 444 PR01090 Neuroligin IPR000460 533 554 PR01090 Neuroligin IPR000460 563 581 PR01090 Neuroligin IPR000460 662 691 PR01090 Neuroligin HMMPfam IPR002018 21 584 PF00135 Carboxylesterase
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 15 KPTVGRSLCLTLWFLSLALRAST 37 SECONDARY 23 2 668 LSVTIAVGASLLFLNVLAFAAL 689 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001160132 808 300336,300425,300494 100.0 100.0 NP_061850 828 300336,300425,300494 97.6 100.0 NP_001308205 711 300336,300425,300494 97.2 85.5 XP_006724726 731 300336,300425,300494 94.5 85.5 XP_011529276 731 300336,300425,300494 94.5 85.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA1480 Download

>KIAA1480  2424 bp
ATGTGGCTGCGGCTTGGCCCGCCCTCGCTGTCCCTGAGCCCCAAGCCCACGGTTGGCAGG
AGCCTGTGCCTCACCCTGTGGTTCCTCAGTTTGGCGCTGAGGGCCAGTACCCAGGCCCCA
GCACCCACAGTCAACACTCACTTTGGGAAGCTAAGGGGTGCCCGAGTACCACTGCCCAGT
GAGATCCTGGGGCCTGTGGACCAATACCTGGGGGTGCCCTACGCAGCTCCCCCGATCGGC
GAGAAACGTTTCCTGCCCCCTGAACCACCCCCATCCTGGTCGGGCATCCGGAACGCCACA
CACTTTCCCCCAGTGTGCCCCCAGAACATCCACACAGCTGTGCCCGAAGTCATGCTGCCG
GTCTGGTTCACTGCCAACTTGGATATCGTCGCTACTTACATCCAGGAGCCCAACGAAGAC
TGTCTCTACCTGAACGTCTATGTGCCGACGGAGGATGACATCCGGGACAGTGGTGCTAAA
CCCGTCATGGTCTACATCCACGGAGGCTCTTACATGGAAGGGACAGGCAACATGATTGAT
GGCAGCATCCTCGCCAGTTATGGCAATGTCATCGTCATCACCCTCAACTATCGGGTTGGA
GTGCTAGGTTTCCTGAGTACTGGAGATCAGGCTGCCAAGGGCAACTATGGGCTCCTTGAC
CAGATCCAGGCCCTCCGCTGGGTGAGCGAGAATATTGCCTTCTTCGGGGGAGACCCCCGC
CGGATCACTGTCTTTGGCTCGGGCATTGGTGCATCCTGCGTCAGCCTCCTCACGTTGTCG
CATCACTCAGAGGGACTTTTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCTGTCCAGC
TGGGCTGTGAACTACCAACCAGTGAAGTACACCAGCCTGCTGGCAGACAAAGTGGGCTGT
AATGTGCTGGACACCGTGGATATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAGCTG
GTAGAGCAGGACATCCAGCCAGCCCGCTACCACGTGGCCTTTGGCCCTGTGATTGATGGT
GATGTCATTCCTGATGACCCTGAGATCCTCATGGAGCAGGGCGAGTTCCTCAACTATGAC
ATCATGCTAGGTGTCAACCAGGGCGAGGGTCTCAAGTTTGTGGAAGGGGTGGTGGACCCT
GAGGATGGTGTCTCTGGCACTGACTTTGACTATTCCGTCTCCAATTTTGTGGACAATCTG
TATGGCTATCCTGAGGGTAAGGACACCCTGCGAGAGACCATCAAGTTCATGTATACAGAC
TGGGCAGACCGTGACAACCCTGAGACCCGCCGTAAAACACTGGTGGCACTCTTCACTGAC
CACCAGTGGGTGGAGCCCTCAGTGGTGACAGCCGATCTGCATGCCCGCTACGGCTCGCCT
ACCTACTTCTACGCCTTCTATCATCACTGCCAGAGCCTCATGAAGCCTGCTTGGTCAGAT
GCAGCTCATGGGGATGAAGTACCCTATGTTTTTGGGGTTCCTATGGTAGGCCCCACTGAC
CTTTTCCCCTGCAACTTCTCCAAGAATGATGTTATGCTCAGTGCTGTCGTCATGACCTAT
TGGACCAACTTTGCCAAGACTGGGGATCCCAACAAGCCGGTCCCCCAGGACACCAAGTTC
ATTCACACCAAGGCCAACCGCTTTGAGGAAGTGGCCTGGTCCAAATACAATCCCCGAGAC
CAGCTCTACCTTCACATCGGGCTGAAACCAAGGGTCCGAGATCATTACCGGGCCACTAAG
GTGGCCTTTTGGAAACATCTGGTGCCCCACCTATACAACCTGCATGACATGTTCCACTAT
ACGTCCACCACCACCAAAGTGCCGCCTCCGGATACCACCCACAGCTCCCACATCACCCGC
AGGCCCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACAGCAAC
GAGAATGCCCAGGGGTCCTGGAACGGGGACCAGGATGCAGGGCCACTCCTGGTGGAGAAC
CCTCGTGACTACTCCACTGAATTAAGTGTCACCATCGCCGTGGGGGCCTCCCTCCTGTTC
CTTAACGTTCTGGCCTTCGCTGCCCTCTACTACCGTAAGGACAAACGGCGCCAGGAGCCC
CTGCGGCAGCCTAGCCCTCAGCGGGGAGCCGGGGCCCCGGAGTTGGGAGCTGCTCCAGAG
GAGGAGCTGGCAGCATTACAACTGGGCCCCACCCACCACGAGTGTGAGGCCGGTCCCCCC
CATGACACGCTGCGCCTCACTGCATTGCCCGACTACACCCTGACCCTGCGGCGCTCCCCG
GATGACATCCCACTCATGACCCCCAACACCATCACTATGATCCCCAACTCCCTGGTAGGG
CTGCAGACATTGCACCCCTATAACACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGCCC
CACTCACACTCCACTACCCGGGTA

ORF Protein

Cloned ORF protein sequence for pF1KA1480 Download

>KIAA1480  808 aa
MWLRLGPPSLSLSPKPTVGRSLCLTLWFLSLALRASTQAPAPTVNTHFGKLRGARVPLPS
EILGPVDQYLGVPYAAPPIGEKRFLPPEPPPSWSGIRNATHFPPVCPQNIHTAVPEVMLP
VWFTANLDIVATYIQEPNEDCLYLNVYVPTEDDIRDSGAKPVMVYIHGGSYMEGTGNMID
GSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPR
RITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSLLADKVGC
NVLDTVDMVDCLRQKSAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYD
IMLGVNQGEGLKFVEGVVDPEDGVSGTDFDYSVSNFVDNLYGYPEGKDTLRETIKFMYTD
WADRDNPETRRKTLVALFTDHQWVEPSVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSD
AAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKF
IHTKANRFEEVAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHY
TSTTTKVPPPDTTHSSHITRRPNGKTWSTKRPAISPAYSNENAQGSWNGDQDAGPLLVEN
PRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRQEPLRQPSPQRGAGAPELGAAPE
EELAALQLGPTHHECEAGPPHDTLRLTALPDYTLTLRRSPDDIPLMTPNTITMIPNSLVG
LQTLHPYNTFAAGFNSTGLPHSHSTTRV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA1480 Download

>pF1KA1480  5537 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTGGCTGCGG
CTTGGCCCGCCCTCGCTGTCCCTGAGCCCCAAGCCCACGGTTGGCAGGAGCCTGTGCCTC
ACCCTGTGGTTCCTCAGTTTGGCGCTGAGGGCCAGTACCCAGGCCCCAGCACCCACAGTC
AACACTCACTTTGGGAAGCTAAGGGGTGCCCGAGTACCACTGCCCAGTGAGATCCTGGGG
CCTGTGGACCAATACCTGGGGGTGCCCTACGCAGCTCCCCCGATCGGCGAGAAACGTTTC
CTGCCCCCTGAACCACCCCCATCCTGGTCGGGCATCCGGAACGCCACACACTTTCCCCCA
GTGTGCCCCCAGAACATCCACACAGCTGTGCCCGAAGTCATGCTGCCGGTCTGGTTCACT
GCCAACTTGGATATCGTCGCTACTTACATCCAGGAGCCCAACGAAGACTGTCTCTACCTG
AACGTCTATGTGCCGACGGAGGATGACATCCGGGACAGTGGTGCTAAACCCGTCATGGTC
TACATCCACGGAGGCTCTTACATGGAAGGGACAGGCAACATGATTGATGGCAGCATCCTC
GCCAGTTATGGCAATGTCATCGTCATCACCCTCAACTATCGGGTTGGAGTGCTAGGTTTC
CTGAGTACTGGAGATCAGGCTGCCAAGGGCAACTATGGGCTCCTTGACCAGATCCAGGCC
CTCCGCTGGGTGAGCGAGAATATTGCCTTCTTCGGGGGAGACCCCCGCCGGATCACTGTC
TTTGGCTCGGGCATTGGTGCATCCTGCGTCAGCCTCCTCACGTTGTCGCATCACTCAGAG
GGACTTTTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCTGTCCAGCTGGGCTGTGAAC
TACCAACCAGTGAAGTACACCAGCCTGCTGGCAGACAAAGTGGGCTGTAATGTGCTGGAC
ACCGTGGATATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCAGGAC
ATCCAGCCAGCCCGCTACCACGTGGCCTTTGGCCCTGTGATTGATGGTGATGTCATTCCT
GATGACCCTGAGATCCTCATGGAGCAGGGCGAGTTCCTCAACTATGACATCATGCTAGGT
GTCAACCAGGGCGAGGGTCTCAAGTTTGTGGAAGGGGTGGTGGACCCTGAGGATGGTGTC
TCTGGCACTGACTTTGACTATTCCGTCTCCAATTTTGTGGACAATCTGTATGGCTATCCT
GAGGGTAAGGACACCCTGCGAGAGACCATCAAGTTCATGTATACAGACTGGGCAGACCGT
GACAACCCTGAGACCCGCCGTAAAACACTGGTGGCACTCTTCACTGACCACCAGTGGGTG
GAGCCCTCAGTGGTGACAGCCGATCTGCATGCCCGCTACGGCTCGCCTACCTACTTCTAC
GCCTTCTATCATCACTGCCAGAGCCTCATGAAGCCTGCTTGGTCAGATGCAGCTCATGGG
GATGAAGTACCCTATGTTTTTGGGGTTCCTATGGTAGGCCCCACTGACCTTTTCCCCTGC
AACTTCTCCAAGAATGATGTTATGCTCAGTGCTGTCGTCATGACCTATTGGACCAACTTT
GCCAAGACTGGGGATCCCAACAAGCCGGTCCCCCAGGACACCAAGTTCATTCACACCAAG
GCCAACCGCTTTGAGGAAGTGGCCTGGTCCAAATACAATCCCCGAGACCAGCTCTACCTT
CACATCGGGCTGAAACCAAGGGTCCGAGATCATTACCGGGCCACTAAGGTGGCCTTTTGG
AAACATCTGGTGCCCCACCTATACAACCTGCATGACATGTTCCACTATACGTCCACCACC
ACCAAAGTGCCGCCTCCGGATACCACCCACAGCTCCCACATCACCCGCAGGCCCAATGGC
AAGACCTGGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACAGCAACGAGAATGCCCAG
GGGTCCTGGAACGGGGACCAGGATGCAGGGCCACTCCTGGTGGAGAACCCTCGTGACTAC
TCCACTGAATTAAGTGTCACCATCGCCGTGGGGGCCTCCCTCCTGTTCCTTAACGTTCTG
GCCTTCGCTGCCCTCTACTACCGTAAGGACAAACGGCGCCAGGAGCCCCTGCGGCAGCCT
AGCCCTCAGCGGGGAGCCGGGGCCCCGGAGTTGGGAGCTGCTCCAGAGGAGGAGCTGGCA
GCATTACAACTGGGCCCCACCCACCACGAGTGTGAGGCCGGTCCCCCCCATGACACGCTG
CGCCTCACTGCATTGCCCGACTACACCCTGACCCTGCGGCGCTCCCCGGATGACATCCCA
CTCATGACCCCCAACACCATCACTATGATCCCCAACTCCCTGGTAGGGCTGCAGACATTG
CACCCCTATAACACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGCCCCACTCACACTCC
ACTACCCGGGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTT
TGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCC
CGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTT
GCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAAC
TCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGT
GTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCT
GCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGA
CTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC
ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATG
AGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGT
CGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCC
TGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCG
GAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCC
TTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGC
CTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT