OR6C6 ORF clone FHC28140

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Halotag ORF Clone FHC28140

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Clone info.

Species

human

Clone Name

pFN21AE6009 Sequence (with vector) Restriction Map

Product ID

FHC28140

ORF Sequence

DNA sequence (942 bp)
Protein sequence (314 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6009

Symbol

OR6C6

Description

olfactory receptor, family 6, subfamily C, member 6

Original Clone ID

cp96009

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 942 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 314 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31817.1 3e-73 100.0 OR6C6 CCDS31825.1 5.3e-53 73.4 OR6C70 CCDS31816.1 2.8e-52 70.2 OR6C74 CCDS31820.1 1.8e-51 70.3 OR6C75 CCDS31823.1 2.1e-51 71.1 OR6C76 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 24 48 PR00237 GPCR IPR000276 57 78 PR00237 GPCR IPR000725 90 101 PR00245 Olfactory receptor IPR000276 102 124 PR00237 GPCR IPR000725 127 139 PR00245 Olfactory receptor IPR000276 138 159 PR00237 GPCR IPR000725 174 190 PR00245 Olfactory receptor IPR000276 197 220 PR00237 GPCR IPR000725 234 243 PR00245 Olfactory receptor IPR000276 270 296 PR00237 GPCR IPR000725 281 292 PR00245 Olfactory receptor HMMPfam IPR000276 39 288 PF00001 GPCR ProfileScan IPR017452 39 288 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 8 IEFILLGLTDDPQLQIVIFLFLF 30 SECONDARY 23 2 37 LMGNLIIIILTLLDPRLKTPMYF 59 SECONDARY 23 3 63 NFSFLEVIFTTVCIPRFLITIVT 85 SECONDARY 23 4 95 CATQLFFILLPGVTEFYLLAAMS 117 SECONDARY 23 5 139 CYQLVLSSWVTGFLIIFPPLVMG 161 PRIMARY 23 6 201 AVVTLVVTLVLVILSYTCIIKTI 223 PRIMARY 23 7 238 TCTSHMIVVSMTYGSCIFMYIKP 260 SECONDARY 23 8 267 TVSKGVALLYTSIAPLLNPFIYT 289 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_835462 317 608493 41.7 95.2 NP_001005216 311 615016,615082 42.2 93.6 NP_009091 312 600578 41.1 99.0 NP_001001957 314 616729 44.6 93.6 NP_003691 308 608494 42.5 97.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6009 Download

>KIEE6009  942 bp
ATGAAGAACAAATCAATGGAAATAGAGTTCATTCTCCTAGGATTGACAGATGACCCACAG
TTGCAAATTGTGATTTTCCTGTTTCTATTTCTCAACTACACCTTGAGCCTGATGGGGAAC
TTAATCATCATCATCCTCACCCTGCTGGATCCCCGGCTCAAGACGCCAATGTATTTCTTT
CTCCGTAATTTCTCCTTTTTGGAAGTAATATTCACAACAGTGTGTATTCCTAGATTCTTG
ATAACCATTGTGACTAGAGACAAAACCATTTCTTATAATAATTGTGCAACTCAATTATTT
TTTATCCTTTTACCGGGAGTTACTGAGTTTTACCTCCTGGCTGCCATGTCCTATGACCGC
TACGTTGCCATCTGCAAACCACTGCATTATCCAATCATTATGAGCAGCAAAGTCTGCTAC
CAACTTGTACTTAGCTCTTGGGTAACTGGATTCTTAATCATATTTCCCCCATTGGTCATG
GGACTCAAGCTGGATTTTTGTGCTTCCAAAACTATTGACCACTTTATGTGTGAAACTTCT
CCTATTCTGCAGATCTCCTGCACAGATACCCATGTCCTAGAATTGATGTCTTTTACCTTA
GCTGTGGTGACACTTGTGGTCACACTGGTATTAGTGATTCTCTCTTACACTTGCATTATT
AAGACCATTCTGAAATTCTCTTCTGCACAGCAAAGGAACAAAGCATTTTCCACCTGTACT
TCCCACATGATTGTTGTCTCCATGACATATGGTAGCTGTATCTTTATGTATATTAAACCA
TCTGCAAAAGAAAGAGTGACTGTATCCAAAGGTGTAGCTTTGCTCTATACCTCAATTGCC
CCTTTACTAAATCCCTTCATTTATACTCTCAGAAACCAGCAGGTGAAAGAAGTCTTCTGG
GATGTATTACAAAAGAATTTGTGTTTTTCTAAAAGACCATTT

ORF Protein

Cloned ORF protein sequence for pFN21AE6009 Download

>KIEE6009  314 aa
MKNKSMEIEFILLGLTDDPQLQIVIFLFLFLNYTLSLMGNLIIIILTLLDPRLKTPMYFF
LRNFSFLEVIFTTVCIPRFLITIVTRDKTISYNNCATQLFFILLPGVTEFYLLAAMSYDR
YVAICKPLHYPIIMSSKVCYQLVLSSWVTGFLIIFPPLVMGLKLDFCASKTIDHFMCETS
PILQISCTDTHVLELMSFTLAVVTLVVTLVLVILSYTCIIKTILKFSSAQQRNKAFSTCT
SHMIVVSMTYGSCIFMYIKPSAKERVTVSKGVALLYTSIAPLLNPFIYTLRNQQVKEVFW
DVLQKNLCFSKRPF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6009 Download

>pFN21AE6009  5647 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAAGAACAAATCAATGGAAATAGAGTTCATTCT
CCTAGGATTGACAGATGACCCACAGTTGCAAATTGTGATTTTCCTGTTTCTATTTCTCAA
CTACACCTTGAGCCTGATGGGGAACTTAATCATCATCATCCTCACCCTGCTGGATCCCCG
GCTCAAGACGCCAATGTATTTCTTTCTCCGTAATTTCTCCTTTTTGGAAGTAATATTCAC
AACAGTGTGTATTCCTAGATTCTTGATAACCATTGTGACTAGAGACAAAACCATTTCTTA
TAATAATTGTGCAACTCAATTATTTTTTATCCTTTTACCGGGAGTTACTGAGTTTTACCT
CCTGGCTGCCATGTCCTATGACCGCTACGTTGCCATCTGCAAACCACTGCATTATCCAAT
CATTATGAGCAGCAAAGTCTGCTACCAACTTGTACTTAGCTCTTGGGTAACTGGATTCTT
AATCATATTTCCCCCATTGGTCATGGGACTCAAGCTGGATTTTTGTGCTTCCAAAACTAT
TGACCACTTTATGTGTGAAACTTCTCCTATTCTGCAGATCTCCTGCACAGATACCCATGT
CCTAGAATTGATGTCTTTTACCTTAGCTGTGGTGACACTTGTGGTCACACTGGTATTAGT
GATTCTCTCTTACACTTGCATTATTAAGACCATTCTGAAATTCTCTTCTGCACAGCAAAG
GAACAAAGCATTTTCCACCTGTACTTCCCACATGATTGTTGTCTCCATGACATATGGTAG
CTGTATCTTTATGTATATTAAACCATCTGCAAAAGAAAGAGTGACTGTATCCAAAGGTGT
AGCTTTGCTCTATACCTCAATTGCCCCTTTACTAAATCCCTTCATTTATACTCTCAGAAA
CCAGCAGGTGAAAGAAGTCTTCTGGGATGTATTACAAAAGAATTTGTGTTTTTCTAAAAG
ACCATTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT