OR4D9 ORF clone FHC28030

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC28030

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Clone info.

Species

human

Clone Name

pFN21AE6006 Sequence (with vector) Restriction Map

Product ID

FHC28030

ORF Sequence

DNA sequence (942 bp)
Protein sequence (314 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6006

Symbol

OR4D9

Alias : OR11-253

Description

olfactory receptor, family 4, subfamily D, member 9

Original Clone ID

cp96006

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 942 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 314 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31564.1 4e-94 100.0 OR4D9 CCDS31563.1 3.4e-76 82.3 OR4D11 CCDS53636.1 3.9e-73 79.4 OR4D10 CCDS31562.1 4.5e-64 68.0 OR4D6 CCDS42365.1 3.1e-62 63.9 OR4D1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000725 235 244 PR00245 Olfactory receptor IPR000276 269 295 PR00237 GPCR IPR000725 280 291 PR00245 Olfactory receptor HMMPfam IPR000276 41 287 PF00001 GPCR ProfileScan IPR017452 41 287 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 20 SRELSQVLFTFLFLVYMTTLMGN 42 SECONDARY 23 2 62 LLRNLSILDICFSSITAPKVLID 84 SECONDARY 23 3 95 SGCVTQMFFFHLLGGADVFSLSV 117 SECONDARY 23 4 146 VASWVGGFVHSIAQISLLLPLPF 168 SECONDARY 23 5 205 LVSWFVFFFLLISYTVILMMLR 226 PRIMARY 22 6 237 ISTCTSHITVVTLHFVPCIYVYA 259 SECONDARY 23 7 268 DTAISVTFTVISPLLNPIIYTLR 290 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001004703 309 614273 49.0 96.8 NP_006628 314 608496 43.2 95.5 NP_036492 312 603232 40.9 97.1 XP_011520809 312 603232 40.9 97.1 XP_011520808 322 603232 40.9 97.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6006 Download

>KIEE6006  942 bp
ATGGATCAGAGAAATTACACCAGAGTGAAAGAATTTACCTTCCTGGGAATTACTCAGTCC
CGAGAACTGAGCCAGGTCTTATTTACCTTCCTGTTTTTGGTGTACATGACAACTCTAATG
GGAAACTTCCTCATCATGGTTACAGTTACCTGTGAATCTCACCTTCATACGCCCATGTAC
TTCCTGCTCCGCAACCTGTCTATTCTTGACATCTGCTTTTCCTCCATCACAGCTCCTAAG
GTCCTGATAGATCTTCTATCAGAGACAAAAACCATCTCCTTCAGTGGCTGTGTCACTCAA
ATGTTCTTCTTCCACCTTCTGGGGGGAGCAGACGTTTTTTCTCTCTCTGTGATGGCGTTT
GACCGCTATATAGCCATCTCCAAGCCCCTGCACTATATGACCATCATGAGTAGGGGGCGA
TGCACAGGCCTCATCGTGGCTTCCTGGGTGGGGGGCTTTGTCCACTCCATAGCGCAGATT
TCTCTATTGCTCCCACTCCCTTTCTGTGGACCCAATGTTCTTGACACTTTCTACTGCGAT
GTCCCCCAGGTCCTCAAACTTGCCTGCACTGACACCTTCACTCTGGAGCTCCTGATGATT
TCAAATAATGGGTTAGTCAGTTGGTTTGTATTCTTCTTTCTCCTCATATCTTACACGGTC
ATCTTGATGATGCTGAGGTCTCACACTGGGGAAGGCAGGAGGAAAGCCATCTCCACCTGC
ACCTCCCACATCACCGTGGTGACCCTGCATTTCGTGCCCTGCATCTATGTCTATGCCCGG
CCCTTCACTGCCCTCCCCACAGACACTGCCATCTCTGTCACCTTCACTGTCATCTCCCCT
TTGCTCAATCCTATAATTTACACGCTGAGGAATCAGGAAATGAAGTTGGCCATGAGGAAA
CTGAAGAGACGGCTAGGACAATCAGAAAGGATTTTAATTCAA

ORF Protein

Cloned ORF protein sequence for pFN21AE6006 Download

>KIEE6006  314 aa
MDQRNYTRVKEFTFLGITQSRELSQVLFTFLFLVYMTTLMGNFLIMVTVTCESHLHTPMY
FLLRNLSILDICFSSITAPKVLIDLLSETKTISFSGCVTQMFFFHLLGGADVFSLSVMAF
DRYIAISKPLHYMTIMSRGRCTGLIVASWVGGFVHSIAQISLLLPLPFCGPNVLDTFYCD
VPQVLKLACTDTFTLELLMISNNGLVSWFVFFFLLISYTVILMMLRSHTGEGRRKAISTC
TSHITVVTLHFVPCIYVYARPFTALPTDTAISVTFTVISPLLNPIIYTLRNQEMKLAMRK
LKRRLGQSERILIQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6006 Download

>pFN21AE6006  5647 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGATCAGAGAAATTACACCAGAGTGAAAGAATT
TACCTTCCTGGGAATTACTCAGTCCCGAGAACTGAGCCAGGTCTTATTTACCTTCCTGTT
TTTGGTGTACATGACAACTCTAATGGGAAACTTCCTCATCATGGTTACAGTTACCTGTGA
ATCTCACCTTCATACGCCCATGTACTTCCTGCTCCGCAACCTGTCTATTCTTGACATCTG
CTTTTCCTCCATCACAGCTCCTAAGGTCCTGATAGATCTTCTATCAGAGACAAAAACCAT
CTCCTTCAGTGGCTGTGTCACTCAAATGTTCTTCTTCCACCTTCTGGGGGGAGCAGACGT
TTTTTCTCTCTCTGTGATGGCGTTTGACCGCTATATAGCCATCTCCAAGCCCCTGCACTA
TATGACCATCATGAGTAGGGGGCGATGCACAGGCCTCATCGTGGCTTCCTGGGTGGGGGG
CTTTGTCCACTCCATAGCGCAGATTTCTCTATTGCTCCCACTCCCTTTCTGTGGACCCAA
TGTTCTTGACACTTTCTACTGCGATGTCCCCCAGGTCCTCAAACTTGCCTGCACTGACAC
CTTCACTCTGGAGCTCCTGATGATTTCAAATAATGGGTTAGTCAGTTGGTTTGTATTCTT
CTTTCTCCTCATATCTTACACGGTCATCTTGATGATGCTGAGGTCTCACACTGGGGAAGG
CAGGAGGAAAGCCATCTCCACCTGCACCTCCCACATCACCGTGGTGACCCTGCATTTCGT
GCCCTGCATCTATGTCTATGCCCGGCCCTTCACTGCCCTCCCCACAGACACTGCCATCTC
TGTCACCTTCACTGTCATCTCCCCTTTGCTCAATCCTATAATTTACACGCTGAGGAATCA
GGAAATGAAGTTGGCCATGAGGAAACTGAAGAGACGGCTAGGACAATCAGAAAGGATTTT
AATTCAAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAG
GCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCA
CCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGA
TACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGT
GAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAAC
AACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTA
AGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTT
GCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTC
TGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAAT
GTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATG
AGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAA
CATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCAC
CCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTAC
ATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTT
CCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCC
GGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCA
CCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCC
ATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAG
GAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAA
CCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATG
GCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAA
TTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCG
GCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATT
GCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGT
CAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAG
CATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGG
CGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAG
GCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCC
GCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAG
GACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGA
CCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTC
ATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGT
CCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCA
GAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACA
CTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAG
TTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCA
AGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGG
GGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAA
AAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGC
CCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAA
TGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGAT
TGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCT
GAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCC
CTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATC
GAGATCT