OR1S1 ORF clone FHC28016

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC28016

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Clone info.

Species

human

Clone Name

pFN21AE6089 Sequence (with vector) Restriction Map

Product ID

FHC28016

ORF Sequence

DNA sequence (975 bp)
Protein sequence (325 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6089

Symbol

OR1S1

Alias : OR11-232, OST034

Description

olfactory receptor, family 1, subfamily S, member 1 (gene/pseudogene)

Original Clone ID

cp96089

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 975 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 325 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31545.1 7.7e-89 91.1 OR1S2 CCDS35122.1 1.6e-52 56.7 OR1J4 CCDS10496.1 3.2e-52 55.1 OR1F1 CCDS35121.1 2.2e-51 56.4 OR1J2 CCDS32896.1 1e-50 54.0 OR1M1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 39 63 PR00237 GPCR IPR000276 72 93 PR00237 GPCR IPR000725 105 116 PR00245 Olfactory receptor IPR000276 117 139 PR00237 GPCR IPR000725 142 154 PR00245 Olfactory receptor IPR000725 189 205 PR00245 Olfactory receptor IPR000276 212 235 PR00237 GPCR IPR000725 249 258 PR00245 Olfactory receptor IPR000276 285 311 PR00237 GPCR IPR000725 296 307 PR00245 Olfactory receptor HMMPfam IPR000276 54 303 PF00001 GPCR ProfileScan IPR017452 54 303 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 39 LLFVLFLGMYLVTVIGNGLIIVA 61 PRIMARY 23 2 116 FSIVFVVIDNLLLGTMAYDHFVA 138 PRIMARY 23 3 152 RFGILLTVISWFLSNIIALTHTL 174 PRIMARY 23 4 214 IVGLSVIIFPFTLSFFSYVCIIR 236 PRIMARY 23 5 253 TCGSHLTVVLLFYGTIVGVYFF 274 PRIMARY 22 6 284 DKIGAVLFTVVTPMINPFIYSLR 306 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520808 322 603232 55.1 96.6 XP_011520809 312 603232 55.1 96.0 NP_036492 312 603232 55.1 96.0 NP_001005191 312 611538 52.8 94.5 NP_002539 312 164342 50.6 96.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6089 Download

>KIEE6089  975 bp
ATGAAGACTTTTAGTTCCTTTCTTCAGATCGGCAGAAATATGCATCAAGGAAACCAAACC
ACCATCACTGAATTCATTCTCCTGGGATTTTTCAAGCAGGATGAGCATCAAAACCTCCTC
TTTGTGCTTTTCTTGGGTATGTACCTGGTCACTGTGATTGGGAACGGGCTCATCATTGTG
GCTATCAGCTTGGATACGTACCTTCATACCCCCATGTATCTCTTCCTTGCCAATCTATCC
TTTGCTGATATTTCCTCCATTTCCAACTCAGTCCCCAAAATGCTGGTGAATATTCAAACC
AAGAGTCAATCCATCTCTTATGAGAGCTGCATCACACAGATGTACTTTTCTATTGTGTTT
GTCGTCATTGACAATTTGCTCTTGGGGACCATGGCCTATGACCACTTTGTGGCGATCTGC
CACCCTCTGAATTATACAATTCTCATGCGGCCCAGGTTCGGCATTTTGCTCACAGTCATC
TCATGGTTCCTCAGTAATATTATTGCTCTGACACACACCCTTCTGCTCATTCAATTGCTC
TTCTGTAACCACAACACTCTCCCACACTTCTTCTGTGACTTGGCCCCTCTGCTCAAACTG
TCCTGTTCAGATACATTGATCAATGAGCTTGTGTTGTTTATTGTGGGTTTATCAGTTATC
ATCTTCCCCTTTACACTCAGCTTCTTTTCCTATGTCTGCATCATCAGAGCTGTCCTGAGA
GTATCTTCCACACAGGGAAAGTGGAAAGCCTTCTCCACTTGTGGCTCTCACCTGACAGTT
GTATTACTGTTCTACGGAACCATTGTAGGCGTGTACTTTTTCCCCTCCTCCACTCACCCT
GAGGACACTGATAAGATTGGTGCTGTCCTATTCACTGTGGTGACACCCATGATAAACCCC
TTCATCTACAGCTTGAGGAATAAGGATATGAAAGGTGCCCTGAGAAAGCTCATCAATAGA
AAAATTTCTTCCCTT

ORF Protein

Cloned ORF protein sequence for pFN21AE6089 Download

>KIEE6089  325 aa
MKTFSSFLQIGRNMHQGNQTTITEFILLGFFKQDEHQNLLFVLFLGMYLVTVIGNGLIIV
AISLDTYLHTPMYLFLANLSFADISSISNSVPKMLVNIQTKSQSISYESCITQMYFSIVF
VVIDNLLLGTMAYDHFVAICHPLNYTILMRPRFGILLTVISWFLSNIIALTHTLLLIQLL
FCNHNTLPHFFCDLAPLLKLSCSDTLINELVLFIVGLSVIIFPFTLSFFSYVCIIRAVLR
VSSTQGKWKAFSTCGSHLTVVLLFYGTIVGVYFFPSSTHPEDTDKIGAVLFTVVTPMINP
FIYSLRNKDMKGALRKLINRKISSL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6089 Download

>pFN21AE6089  5680 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAAGACTTTTAGTTCCTTTCTTCAGATCGGCAG
AAATATGCATCAAGGAAACCAAACCACCATCACTGAATTCATTCTCCTGGGATTTTTCAA
GCAGGATGAGCATCAAAACCTCCTCTTTGTGCTTTTCTTGGGTATGTACCTGGTCACTGT
GATTGGGAACGGGCTCATCATTGTGGCTATCAGCTTGGATACGTACCTTCATACCCCCAT
GTATCTCTTCCTTGCCAATCTATCCTTTGCTGATATTTCCTCCATTTCCAACTCAGTCCC
CAAAATGCTGGTGAATATTCAAACCAAGAGTCAATCCATCTCTTATGAGAGCTGCATCAC
ACAGATGTACTTTTCTATTGTGTTTGTCGTCATTGACAATTTGCTCTTGGGGACCATGGC
CTATGACCACTTTGTGGCGATCTGCCACCCTCTGAATTATACAATTCTCATGCGGCCCAG
GTTCGGCATTTTGCTCACAGTCATCTCATGGTTCCTCAGTAATATTATTGCTCTGACACA
CACCCTTCTGCTCATTCAATTGCTCTTCTGTAACCACAACACTCTCCCACACTTCTTCTG
TGACTTGGCCCCTCTGCTCAAACTGTCCTGTTCAGATACATTGATCAATGAGCTTGTGTT
GTTTATTGTGGGTTTATCAGTTATCATCTTCCCCTTTACACTCAGCTTCTTTTCCTATGT
CTGCATCATCAGAGCTGTCCTGAGAGTATCTTCCACACAGGGAAAGTGGAAAGCCTTCTC
CACTTGTGGCTCTCACCTGACAGTTGTATTACTGTTCTACGGAACCATTGTAGGCGTGTA
CTTTTTCCCCTCCTCCACTCACCCTGAGGACACTGATAAGATTGGTGCTGTCCTATTCAC
TGTGGTGACACCCATGATAAACCCCTTCATCTACAGCTTGAGGAATAAGGATATGAAAGG
TGCCCTGAGAAAGCTCATCAATAGAAAAATTTCTTCCCTTGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT