OR6Q1 ORF clone FHC28011

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC28011

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Clone info.

Species

human

Clone Name

pFN21AE6037 Sequence (with vector) Restriction Map

Product ID

FHC28011

ORF Sequence

DNA sequence (951 bp)
Protein sequence (317 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6037

Symbol

OR6Q1

Alias : OR11-226

Description

olfactory receptor, family 6, subfamily Q, member 1 (gene/pseudogene)

Original Clone ID

cp96037

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 951 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 317 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31541.1 8.4e-95 99.4 OR6Q1 CCDS7772.1 1.1e-44 49.4 OR6A2 CCDS43667.1 1.4e-43 49.8 OR6B1 CCDS30905.1 1e-42 49.2 OR6N1 CCDS42837.1 1.7e-42 49.0 OR6B3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 28 52 PR00237 GPCR IPR000725 96 107 PR00245 Olfactory receptor IPR000276 108 130 PR00237 GPCR IPR000725 133 145 PR00245 Olfactory receptor IPR000725 180 196 PR00245 Olfactory receptor IPR000276 203 226 PR00237 GPCR IPR000725 240 249 PR00245 Olfactory receptor IPR000276 276 302 PR00237 GPCR IPR000725 287 298 PR00245 Olfactory receptor HMMPfam IPR000276 43 294 PF00001 GPCR ProfileScan IPR017452 43 294 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 30 FILFLTMYLFTLVENLAIILVVG 52 PRIMARY 23 2 99 AGCLSQLFIFTFLGATECFLLAA 121 PRIMARY 23 3 147 RLAAACWLVGFLTPILPIYLLSQ 169 PRIMARY 23 4 207 SLAVLLASSMVIAVSYGNIVWTL 229 PRIMARY 23 5 243 STCAAHLTVVSLFYGTLFFMYVQ 265 SECONDARY 23 6 274 FNKVVSVFYSVVTPMLNPLIYSL 296 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003687 327 608495 49.4 97.2 NP_835462 317 608493 47.0 95.6 NP_001004729 311 615702 43.7 95.3 NP_003688 314 608492 43.6 96.2 NP_006628 314 608496 44.0 97.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6037 Download

>KIEE6037  951 bp
ATGCAACCATATACCAAAAACTGGACCCAGGTAACTGAATTTGTCATGATGGGCTTTGCT
GGCATCCATGAAGCACACCTCCTCTTCTTCATACTCTTCCTCACCATGTACCTGTTCACC
TTGGTGGAGAATTTGGCCATCATTTTAGTGGTGGGTTTGGACCACCGACTACGGAGACCC
ATGTATTTCTTCCTGACACACTTGTCCTGCCTTGAAATCTGGTACACTTCTGTTACAGTG
CCCAAGATGCTGGCTGGTTTTATTGGGGTGGATGGTGGCAAGAATATCTCTTATGCTGGT
TGCCTATCCCAGCTCTTCATCTTCACCTTTCTTGGGGCAACTGAGTGTTTCCTACTGGCT
GCCATGGCCTATGATCGTTATGTGGCCATTTGTATGCCTCTCCACTATGGGGCTTTTGTG
TCCTGGGGCACCTGCATCCGTCTGGCAGCTGCCTGTTGGCTGGTAGGTTTCCTCACACCC
ATCTTGCCAATCTACCTCTTGTCTCAGCTAACATTTTGTGGCCCAAATGTCATTGACCAT
TTCTCCTGTGATGCCTCACCCTTGCTAGCCTTGTCGTGCTCAGATGTCACTTGGAAGGAG
ACTGTGGATTTCCTGGTGTCTCTGGCTGTGCTACTGGCCTCCTCTATGGTCATTGCTGTG
TCCTATGGCAACATCGTCTGGACACTGCTGCACATCCGCTCAGCTGCTGAGCGCTGGAAG
GCCTTCTCTACCTGTGCAGCTCACCTGACTGTGGTGAGCCTCTTCTATGGCACTCTTTTC
TTTATGTATGTCCAGACCAAGGTGACCTCCTCCATCAACTTCAACAAGGTGGTATCTGTC
TTCTACTCTGTTGTCACGCCCATGCTCAATCCTCTCATCTACAGTCTTAGGAACAAGGAA
GTGAAGGGAGCTCTGGGTCGAGTCTTTTCTCTCAACTTTTGGAAGGGACAG

ORF Protein

Cloned ORF protein sequence for pFN21AE6037 Download

>KIEE6037  317 aa
MQPYTKNWTQVTEFVMMGFAGIHEAHLLFFILFLTMYLFTLVENLAIILVVGLDHRLRRP
MYFFLTHLSCLEIWYTSVTVPKMLAGFIGVDGGKNISYAGCLSQLFIFTFLGATECFLLA
AMAYDRYVAICMPLHYGAFVSWGTCIRLAAACWLVGFLTPILPIYLLSQLTFCGPNVIDH
FSCDASPLLALSCSDVTWKETVDFLVSLAVLLASSMVIAVSYGNIVWTLLHIRSAAERWK
AFSTCAAHLTVVSLFYGTLFFMYVQTKVTSSINFNKVVSVFYSVVTPMLNPLIYSLRNKE
VKGALGRVFSLNFWKGQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6037 Download

>pFN21AE6037  5656 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCAACCATATACCAAAAACTGGACCCAGGTAAC
TGAATTTGTCATGATGGGCTTTGCTGGCATCCATGAAGCACACCTCCTCTTCTTCATACT
CTTCCTCACCATGTACCTGTTCACCTTGGTGGAGAATTTGGCCATCATTTTAGTGGTGGG
TTTGGACCACCGACTACGGAGACCCATGTATTTCTTCCTGACACACTTGTCCTGCCTTGA
AATCTGGTACACTTCTGTTACAGTGCCCAAGATGCTGGCTGGTTTTATTGGGGTGGATGG
TGGCAAGAATATCTCTTATGCTGGTTGCCTATCCCAGCTCTTCATCTTCACCTTTCTTGG
GGCAACTGAGTGTTTCCTACTGGCTGCCATGGCCTATGATCGTTATGTGGCCATTTGTAT
GCCTCTCCACTATGGGGCTTTTGTGTCCTGGGGCACCTGCATCCGTCTGGCAGCTGCCTG
TTGGCTGGTAGGTTTCCTCACACCCATCTTGCCAATCTACCTCTTGTCTCAGCTAACATT
TTGTGGCCCAAATGTCATTGACCATTTCTCCTGTGATGCCTCACCCTTGCTAGCCTTGTC
GTGCTCAGATGTCACTTGGAAGGAGACTGTGGATTTCCTGGTGTCTCTGGCTGTGCTACT
GGCCTCCTCTATGGTCATTGCTGTGTCCTATGGCAACATCGTCTGGACACTGCTGCACAT
CCGCTCAGCTGCTGAGCGCTGGAAGGCCTTCTCTACCTGTGCAGCTCACCTGACTGTGGT
GAGCCTCTTCTATGGCACTCTTTTCTTTATGTATGTCCAGACCAAGGTGACCTCCTCCAT
CAACTTCAACAAGGTGGTATCTGTCTTCTACTCTGTTGTCACGCCCATGCTCAATCCTCT
CATCTACAGTCTTAGGAACAAGGAAGTGAAGGGAGCTCTGGGTCGAGTCTTTTCTCTCAA
CTTTTGGAAGGGACAGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTC
GACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGG
CTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGAC
ATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGC
TTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAA
CAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAG
GTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTC
TTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAG
CACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTT
CGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATG
AGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTT
TTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGA
GTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAA
GAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGT
ATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTT
GAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGC
AGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGA
GGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGAT
CGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCT
GTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCC
CGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCG
GCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGC
GGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACG
ACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCA
CTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTC
ACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCC
ATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAA
ACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTC
CTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGC
TGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA
GGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACT
ACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTT
TTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCT
TTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGA
GATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACG
CTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAG
TGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATC
AGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGT
GATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTA
CTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCG
TAGAGGATCGAGATCT