OR4A47 ORF clone FHC27973

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC27973

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Clone info.

Species

human

Clone Name

pFN21AE5462 Sequence (with vector) Restriction Map

Product ID

FHC27973

ORF Sequence

DNA sequence (927 bp)
Protein sequence (309 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5462

Symbol

OR4A47

Alias : OR11-113

Description

olfactory receptor, family 4, subfamily A, member 47

Original Clone ID

cp95462

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 927 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 309 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31490.1 3.5e-93 99.4 OR4A47 CCDS31500.1 6.8e-62 63.6 OR4A15 CCDS73289.1 1.6e-60 66.8 OR4A5 CCDS31496.1 3.7e-58 60.1 OR4C12 CCDS31499.1 1.7e-57 64.3 OR4A16 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 24 48 PR00237 GPCR IPR000276 57 78 PR00237 GPCR IPR000725 90 101 PR00245 Olfactory receptor IPR000276 102 124 PR00237 GPCR IPR000725 127 139 PR00245 Olfactory receptor IPR000725 174 190 PR00245 Olfactory receptor IPR000725 233 242 PR00245 Olfactory receptor IPR000276 267 293 PR00237 GPCR IPR000725 278 289 PR00245 Olfactory receptor HMMPfam IPR000276 39 285 PF00001 GPCR ProfileScan IPR017452 39 285 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 26 FVMFLLFYILTMVGNLLIVVTVT 48 PRIMARY 23 2 53 LGSPMYFFLAGLSFIDIIYSSSI 75 PRIMARY 23 3 79 LISGLFFGNNSISFQSCMAQLFI 101 SECONDARY 23 4 108 SEVFLLLVMAYDCYVAICKPLHY 130 PRIMARY 23 5 141 LLLVVSWVGGFLHSVFQLSIIYG 163 PRIMARY 23 6 197 VVANGGLACTIVFLLLLISYGVI 219 PRIMARY 23 7 238 CSSHMTVVVFFFVPCIFMYARPA 260 PRIMARY 23 8 268 SVSVFYTVITPMLNPLIYTLRNS 290 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001004703 309 614273 61.4 99.0 NP_006628 314 608496 44.1 97.4 NP_001005216 311 615016,615082 42.6 94.2 NP_036492 312 603232 42.2 98.1 XP_011520809 312 603232 42.2 98.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5462 Download

>KIEE5462  927 bp
ATGGAGCCAAGGAAAAATGTGACTGACTTTGTCCTCTTGGGCTTCACACAGAATCCAAAG
GAGCAGAAAGTACTTTTTGTTATGTTCTTGCTCTTCTACATTTTGACCATGGTGGGCAAC
CTGCTCATTGTAGTGACCGTAACTGTCAGTGAGACCCTGGGCTCACCAATGTACTTCTTT
CTTGCTGGCTTATCATTTATAGATATCATTTATTCTTCATCCATTTCCCCCAGATTGATT
TCAGGCTTGTTCTTTGGGAATAATTCCATATCCTTCCAATCTTGCATGGCCCAGCTCTTT
ATCGAGCACCTTTTCGGTGGGTCAGAGGTCTTTCTCCTGTTGGTGATGGCCTATGACTGC
TATGTGGCCATCTGTAAGCCCTTGCATTATTTGGTTATCATGAGACAATGGGTGTGTGTT
TTGCTGCTGGTAGTGTCCTGGGTTGGAGGATTTCTGCACTCAGTATTTCAACTTAGCATT
ATTTATGGGCTCCCATTCTGTGGCCCCAATGTCATTGATCATTTTTTCTGTGACATGTAT
CCCTTATTGAAACTGGTCTGCACTGACACCCATGCTATTGGCCTCTTAGTGGTGGCCAAT
GGAGGACTGGCTTGCACTATTGTGTTTCTGCTCTTACTCATCTCTTATGGTGTCATCTTG
CACTCTTTAAAGAACCTTAGTCAGAAAGGGAGGCAAAAAGCCCTCTCAACCTGCAGTTCC
CACATGACTGTGGTTGTCTTCTTCTTTGTTCCTTGTATTTTTATGTATGCTAGACCTGCT
AGGACCTTCCCCATTGACAAATCAGTGAGTGTGTTTTATACAGTCATAACCCCAATGCTG
AACCCCTTAATCTACACTCTGAGAAATTCTGAGATGACAAGTGCTATGAAGAAGCTCTGG
AGAAGAGACCTCATATCAAGTAGTACA

ORF Protein

Cloned ORF protein sequence for pFN21AE5462 Download

>KIEE5462  309 aa
MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVGNLLIVVTVTVSETLGSPMYFF
LAGLSFIDIIYSSSISPRLISGLFFGNNSISFQSCMAQLFIEHLFGGSEVFLLLVMAYDC
YVAICKPLHYLVIMRQWVCVLLLVVSWVGGFLHSVFQLSIIYGLPFCGPNVIDHFFCDMY
PLLKLVCTDTHAIGLLVVANGGLACTIVFLLLLISYGVILHSLKNLSQKGRQKALSTCSS
HMTVVVFFFVPCIFMYARPARTFPIDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKLW
RRDLISSST

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5462 Download

>pFN21AE5462  5632 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGCCAAGGAAAAATGTGACTGACTTTGTCCT
CTTGGGCTTCACACAGAATCCAAAGGAGCAGAAAGTACTTTTTGTTATGTTCTTGCTCTT
CTACATTTTGACCATGGTGGGCAACCTGCTCATTGTAGTGACCGTAACTGTCAGTGAGAC
CCTGGGCTCACCAATGTACTTCTTTCTTGCTGGCTTATCATTTATAGATATCATTTATTC
TTCATCCATTTCCCCCAGATTGATTTCAGGCTTGTTCTTTGGGAATAATTCCATATCCTT
CCAATCTTGCATGGCCCAGCTCTTTATCGAGCACCTTTTCGGTGGGTCAGAGGTCTTTCT
CCTGTTGGTGATGGCCTATGACTGCTATGTGGCCATCTGTAAGCCCTTGCATTATTTGGT
TATCATGAGACAATGGGTGTGTGTTTTGCTGCTGGTAGTGTCCTGGGTTGGAGGATTTCT
GCACTCAGTATTTCAACTTAGCATTATTTATGGGCTCCCATTCTGTGGCCCCAATGTCAT
TGATCATTTTTTCTGTGACATGTATCCCTTATTGAAACTGGTCTGCACTGACACCCATGC
TATTGGCCTCTTAGTGGTGGCCAATGGAGGACTGGCTTGCACTATTGTGTTTCTGCTCTT
ACTCATCTCTTATGGTGTCATCTTGCACTCTTTAAAGAACCTTAGTCAGAAAGGGAGGCA
AAAAGCCCTCTCAACCTGCAGTTCCCACATGACTGTGGTTGTCTTCTTCTTTGTTCCTTG
TATTTTTATGTATGCTAGACCTGCTAGGACCTTCCCCATTGACAAATCAGTGAGTGTGTT
TTATACAGTCATAACCCCAATGCTGAACCCCTTAATCTACACTCTGAGAAATTCTGAGAT
GACAAGTGCTATGAAGAAGCTCTGGAGAAGAGACCTCATATCAAGTAGTACAGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT