OR56A4 ORF clone FHC27944

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC27944

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Clone info.

Species

human

Clone Name

pFN21AE5584 Sequence (with vector) Restriction Map

Product ID

FHC27944

ORF Sequence

DNA sequence (1095 bp)
Protein sequence (365 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5584

Symbol

OR56A4

Alias : OR11-49

Description

olfactory receptor, family 56, subfamily A, member 4

Original Clone ID

cp95584

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1095 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 365 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31404.1 8.6e-117 100.0 OR56A4 CCDS73248.1 1.2e-88 87.2 OR56A5 CCDS31405.1 6.3e-86 83.3 OR56A1 CCDS41614.1 2.8e-79 75.7 OR56A3 CCDS31406.1 2.4e-52 50.6 OR56B4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 81 105 PR00237 GPCR IPR000276 114 135 PR00237 GPCR IPR000725 147 158 PR00245 Olfactory receptor IPR000276 159 181 PR00237 GPCR IPR000725 184 196 PR00245 Olfactory receptor IPR000725 231 247 PR00245 Olfactory receptor IPR000725 291 300 PR00245 Olfactory receptor IPR000276 329 355 PR00237 GPCR IPR000725 340 351 PR00245 Olfactory receptor HMMPfam IPR000276 97 347 PF00001 GPCR ProfileScan IPR017452 96 347 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 27 MYFLCFCTSLLRFKVHWVSRLI 48 SECONDARY 22 2 83 SLPLSLLFLLAMGANTTLLITIQ 105 PRIMARY 23 3 114 LYYLLSLLSLLDIVLCLTVIPKV 136 PRIMARY 23 4 149 FPACFLQMFIMNSFLTMESCTFM 171 SECONDARY 23 5 192 TDQFVARAVVFVIARNAFVSLPV 214 SECONDARY 23 6 259 WTLLGSDLILIVISYSFILKVVL 281 PRIMARY 23 7 294 STCGSHFILILFFSTVLLVLVIT 316 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 41.2 84.9 NP_110401 320 611268 34.3 81.4 XP_011520809 312 603232 31.9 85.2 NP_036492 312 603232 31.9 85.2 XP_011520808 322 603232 31.9 85.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5584 Download

>KIEE5584  1095 bp
ATGATGACAGTGATTTTAAAAACTTTATTGGGACAGATACAGGGCCTCAGTGGAAACCCA
CACTCTACTACGTCTAGAATGTACTTTTTATGTTTCTGTACTTCTCTACTACGTTTTAAG
GTACACTGGGTCTCCAGATTGATCAGGAAACTTTACATGGCATCTCCCAGCAATGACTCC
ACTGCCCCAGTCTCTGAATTCCTCCTCATCTGCTTCCCCAACTTCCAGAGCTGGCAGCAC
TGGTTGTCTCTGCCCCTCAGCCTTCTCTTCCTCCTGGCCATGGGAGCTAACACCACCCTC
CTGATCACCATCCAGCTGGAGGCCTCTCTGCACCAGCCCCTGTACTACCTGCTCAGCCTC
CTCTCCCTGCTGGACATCGTGCTCTGCCTCACCGTCATCCCCAAGGTCCTGGCCATCTTC
TGGTTTGACCTCAGGTCGATCAGCTTCCCAGCCTGCTTCCTCCAGATGTTCATCATGAAC
AGTTTTTTGACCATGGAGTCCTGCACGTTCATGGTCATGGCCTATGACCGTTATGTGGCC
ATCTGCCATCCATTGAGATACCCGTCTATCATCACTGACCAGTTTGTGGCTAGGGCCGTG
GTCTTTGTTATAGCCCGGAATGCCTTTGTTTCTCTTCCTGTTCCCATGCTTTCTGCCAGG
CTCAGATACTGTGCAGGAAACATAATCAAGAACTGCATCTGCAGTAACCTGTCTGTGTCC
AAACTCTCTTGTGATGACATCACTTTCAATCAGCTCTACCAGTTTGTGGCAGGCTGGACT
CTGTTGGGCTCTGATCTTATCCTTATTGTTATCTCCTATTCTTTTATATTGAAAGTTGTG
CTTAGGATCAAGGCCGAGGGTGCTGTGGCCAAGGCCTTGAGCACGTGTGGTTCCCACTTC
ATCCTCATCCTCTTCTTCAGCACAGTCCTGCTGGTTCTGGTCATCACTAACCTGGCCAGG
AAGAGAATTCCTCCAGATGTCCCCATCCTGCTCAACATCCTGCACCACCTCATTCCCCCA
GCTCTGAACCCCATTGTTTATGGTGTGAGAACCAAGGAGATCAAGCAGGGAATCCAAAAC
CTGCTGAAGAGGTTG

ORF Protein

Cloned ORF protein sequence for pFN21AE5584 Download

>KIEE5584  365 aa
MMTVILKTLLGQIQGLSGNPHSTTSRMYFLCFCTSLLRFKVHWVSRLIRKLYMASPSNDS
TAPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSL
LSLLDIVLCLTVIPKVLAIFWFDLRSISFPACFLQMFIMNSFLTMESCTFMVMAYDRYVA
ICHPLRYPSIITDQFVARAVVFVIARNAFVSLPVPMLSARLRYCAGNIIKNCICSNLSVS
KLSCDDITFNQLYQFVAGWTLLGSDLILIVISYSFILKVVLRIKAEGAVAKALSTCGSHF
ILILFFSTVLLVLVITNLARKRIPPDVPILLNILHHLIPPALNPIVYGVRTKEIKQGIQN
LLKRL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5584 Download

>pFN21AE5584  5800 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATGACAGTGATTTTAAAAACTTTATTGGGACA
GATACAGGGCCTCAGTGGAAACCCACACTCTACTACGTCTAGAATGTACTTTTTATGTTT
CTGTACTTCTCTACTACGTTTTAAGGTACACTGGGTCTCCAGATTGATCAGGAAACTTTA
CATGGCATCTCCCAGCAATGACTCCACTGCCCCAGTCTCTGAATTCCTCCTCATCTGCTT
CCCCAACTTCCAGAGCTGGCAGCACTGGTTGTCTCTGCCCCTCAGCCTTCTCTTCCTCCT
GGCCATGGGAGCTAACACCACCCTCCTGATCACCATCCAGCTGGAGGCCTCTCTGCACCA
GCCCCTGTACTACCTGCTCAGCCTCCTCTCCCTGCTGGACATCGTGCTCTGCCTCACCGT
CATCCCCAAGGTCCTGGCCATCTTCTGGTTTGACCTCAGGTCGATCAGCTTCCCAGCCTG
CTTCCTCCAGATGTTCATCATGAACAGTTTTTTGACCATGGAGTCCTGCACGTTCATGGT
CATGGCCTATGACCGTTATGTGGCCATCTGCCATCCATTGAGATACCCGTCTATCATCAC
TGACCAGTTTGTGGCTAGGGCCGTGGTCTTTGTTATAGCCCGGAATGCCTTTGTTTCTCT
TCCTGTTCCCATGCTTTCTGCCAGGCTCAGATACTGTGCAGGAAACATAATCAAGAACTG
CATCTGCAGTAACCTGTCTGTGTCCAAACTCTCTTGTGATGACATCACTTTCAATCAGCT
CTACCAGTTTGTGGCAGGCTGGACTCTGTTGGGCTCTGATCTTATCCTTATTGTTATCTC
CTATTCTTTTATATTGAAAGTTGTGCTTAGGATCAAGGCCGAGGGTGCTGTGGCCAAGGC
CTTGAGCACGTGTGGTTCCCACTTCATCCTCATCCTCTTCTTCAGCACAGTCCTGCTGGT
TCTGGTCATCACTAACCTGGCCAGGAAGAGAATTCCTCCAGATGTCCCCATCCTGCTCAA
CATCCTGCACCACCTCATTCCCCCAGCTCTGAACCCCATTGTTTATGGTGTGAGAACCAA
GGAGATCAAGCAGGGAATCCAAAACCTGCTGAAGAGGTTGGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT