OR52N1 ORF clone FHC27940

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC27940

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Clone info.

Species

human

Clone Name

pFN21AE6059 Sequence (with vector) Restriction Map

Product ID

FHC27940

ORF Sequence

DNA sequence (960 bp)
Protein sequence (320 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6059

Symbol

OR52N1

Alias : OR11-61

Description

olfactory receptor, family 52, subfamily N, member 1

Original Clone ID

cp96059

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 960 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 320 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31398.1 4.7e-120 99.4 OR52N1 CCDS44528.1 4.1e-90 73.7 OR52N4 CCDS31399.1 4.1e-90 75.8 OR52N2 CCDS31397.1 7.5e-84 71.3 OR52N5 CCDS31384.1 9e-61 51.0 OR52D1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000725 94 105 PR00245 Olfactory receptor IPR000725 131 143 PR00245 Olfactory receptor IPR000725 178 194 PR00245 Olfactory receptor IPR000725 238 247 PR00245 Olfactory receptor IPR000725 288 299 PR00245 Olfactory receptor HMMPfam IPR000276 43 295 PF00001 GPCR ProfileScan IPR017452 43 295 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MSFLNGTSLTPASFILNGIPGLE 23 SECONDARY 23 2 27 LWISFPLCTMYSIAITGNFGLMY 49 PRIMARY 23 3 65 LALLSFTDVLMCTSTLPNTLFIL 87 SECONDARY 23 4 108 TFTGMESGVLMLMALDHCVAICF 130 SECONDARY 23 5 149 LTFLRGVMLVIPSTFLTKCLPYC 171 SECONDARY 23 6 205 ALLIGGFDILCITISYTMILQAV 227 PRIMARY 23 7 242 TCTAHICAIVLTYVPAFFTFFTH 264 PRIMARY 23 8 268 GHTIPLHIHIIMANLYLLMPPTM 290 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 45.9 95.6 NP_110401 320 611268 41.7 95.9 NP_003688 314 608492 30.8 99.1 NP_036492 312 603232 31.9 93.8 XP_011520809 312 603232 31.9 93.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6059 Download

>KIEE6059  960 bp
ATGTCATTTCTAAATGGCACCAGCCTAACTCCAGCTTCATTCATCCTAAATGGCATCCCT
GGTTTGGAAGATGTGCATTTGTGGATCTCCTTCCCACTGTGTACCATGTACAGCATTGCT
ATTACAGGGAACTTCGGCCTTATGTACCTCATCTACTGTGATGAGGCCTTACACAGACCT
ATGTATGTCTTCCTTGCCCTTCTTTCCTTCACAGATGTGCTCATGTGCACCAGCACCCTT
CCCAACACTCTCTTCATATTGTGGTTTAATCTCAAGGAGATTGATTTTAAAGCCTGCCTC
GCCCAGATGTTCTTTGTGCACACCTTCACAGGGATGGAGTCTGGGGTGCTCATGCTCATG
GCCCTGGACCACTGTGTGGCCATCTGCTTCCCTCTGCGTTATGCCACCATCCTCACTAAT
TCAGTCATTGCTAAAGCTGGGTTCCTCACTTTTCTTAGGGGTGTGATGCTTGTTATCCCT
TCCACTTTCCTCACCAAGTGCCTTCCATACTGCAAGGGCAACGTCATACCCCACACCTAC
TGTGACCACATGTCTGTGGCCAAGATATCTTGTGGTAATGTCAGGGTTAACGCCATCTAT
GGTTTGATAGTTGCCCTGCTGATTGGGGGCTTTGATATCCTGTGCATTACAATCTCCTAC
ACTATGATTCTTCAAGCAGTTGTGAGTCTATCATCAGCAGATGCTCGACAGAAGGCCTTC
AGCACCTGCACTGCCCACATCTGTGCCATAGTCCTCACCTATGTTCCAGCCTTCTTTACC
TTCTTTACACACCATTTTGGGGGACACACCATTCCTCTACACATACATATTATTATGGCT
AATCTCTACCTACTAATGCCTCCCACAATGAACCCTATTGTGTATGGGGTGAAAACCAGG
CAGGTACGAGAAAGTGTCATTAGGTTCTTTCTTAAGGGAAAGGACAATTCTCATAACTTT

ORF Protein

Cloned ORF protein sequence for pFN21AE6059 Download

>KIEE6059  320 aa
MSFLNGTSLTPASFILNGIPGLEDVHLWISFPLCTMYSIAITGNFGLMYLIYCDEALHRP
MYVFLALLSFTDVLMCTSTLPNTLFILWFNLKEIDFKACLAQMFFVHTFTGMESGVLMLM
ALDHCVAICFPLRYATILTNSVIAKAGFLTFLRGVMLVIPSTFLTKCLPYCKGNVIPHTY
CDHMSVAKISCGNVRVNAIYGLIVALLIGGFDILCITISYTMILQAVVSLSSADARQKAF
STCTAHICAIVLTYVPAFFTFFTHHFGGHTIPLHIHIIMANLYLLMPPTMNPIVYGVKTR
QVRESVIRFFLKGKDNSHNF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6059 Download

>pFN21AE6059  5665 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCATTTCTAAATGGCACCAGCCTAACTCCAGC
TTCATTCATCCTAAATGGCATCCCTGGTTTGGAAGATGTGCATTTGTGGATCTCCTTCCC
ACTGTGTACCATGTACAGCATTGCTATTACAGGGAACTTCGGCCTTATGTACCTCATCTA
CTGTGATGAGGCCTTACACAGACCTATGTATGTCTTCCTTGCCCTTCTTTCCTTCACAGA
TGTGCTCATGTGCACCAGCACCCTTCCCAACACTCTCTTCATATTGTGGTTTAATCTCAA
GGAGATTGATTTTAAAGCCTGCCTCGCCCAGATGTTCTTTGTGCACACCTTCACAGGGAT
GGAGTCTGGGGTGCTCATGCTCATGGCCCTGGACCACTGTGTGGCCATCTGCTTCCCTCT
GCGTTATGCCACCATCCTCACTAATTCAGTCATTGCTAAAGCTGGGTTCCTCACTTTTCT
TAGGGGTGTGATGCTTGTTATCCCTTCCACTTTCCTCACCAAGTGCCTTCCATACTGCAA
GGGCAACGTCATACCCCACACCTACTGTGACCACATGTCTGTGGCCAAGATATCTTGTGG
TAATGTCAGGGTTAACGCCATCTATGGTTTGATAGTTGCCCTGCTGATTGGGGGCTTTGA
TATCCTGTGCATTACAATCTCCTACACTATGATTCTTCAAGCAGTTGTGAGTCTATCATC
AGCAGATGCTCGACAGAAGGCCTTCAGCACCTGCACTGCCCACATCTGTGCCATAGTCCT
CACCTATGTTCCAGCCTTCTTTACCTTCTTTACACACCATTTTGGGGGACACACCATTCC
TCTACACATACATATTATTATGGCTAATCTCTACCTACTAATGCCTCCCACAATGAACCC
TATTGTGTATGGGGTGAAAACCAGGCAGGTACGAGAAAGTGTCATTAGGTTCTTTCTTAA
GGGAAAGGACAATTCTCATAACTTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT