OR52H1 ORF clone FHC27931

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Halotag ORF Clone FHC27931

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Clone info.

Species

human

Clone Name

pFN21AE6062 Sequence (with vector) Restriction Map

Product ID

FHC27931

ORF Sequence

DNA sequence (960 bp)
Protein sequence (320 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6062

Symbol

OR52H1

Alias : OR11-41, OR11-45

Description

olfactory receptor, family 52, subfamily H, member 1

Original Clone ID

cp96062

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 960 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 320 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31386.1 1.8e-89 98.8 OR52H1 CCDS53598.1 6.4e-56 63.3 OR52B2 CCDS31400.1 2.3e-51 57.8 OR52E8 CCDS31371.1 2.4e-50 55.2 OR52E2 CCDS31401.1 1.1e-49 56.6 OR52E4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 34 58 PR00237 GPCR IPR000276 67 88 PR00237 GPCR IPR000725 100 111 PR00245 Olfactory receptor IPR000276 112 134 PR00237 GPCR IPR000725 137 149 PR00245 Olfactory receptor IPR000725 184 200 PR00245 Olfactory receptor IPR000276 207 230 PR00237 GPCR IPR000725 244 253 PR00245 Olfactory receptor IPR000276 282 308 PR00237 GPCR IPR000725 293 304 PR00245 Olfactory receptor HMMPfam IPR000276 49 300 PF00001 GPCR ProfileScan IPR017452 49 300 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 5 SAMIIFNLSSYNPGPFILVGIPG 27 SECONDARY 23 2 36 GIPFCIIYIVAVVGNCILLYLIV 58 PRIMARY 23 3 71 LSMLAMTDLILSTAGVPKTLSIF 93 SECONDARY 23 4 112 LHYNFVLDSAILMAMAFDRYVAI 134 SECONDARY 23 5 151 KSAMGISFRSFCIILPDVFLLTC 173 SECONDARY 23 6 189 HIGVAQLACADISINFWYGFCVP 211 SECONDARY 23 7 218 DVILIAVSYAHILCAVFCLPSQD 240 PRIMARY 23 8 249 CGSHVCVILMFYTPAFFSILAHR 271 SECONDARY 23 9 282 IMFANLYIVIPPALNPMVYGVK 303 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_689643 318 611267 44.7 93.8 NP_110401 320 611268 43.0 94.4 NP_036492 312 603232 32.4 90.3 XP_011520809 312 603232 32.4 90.3 XP_011520808 322 603232 32.4 90.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6062 Download

>KIEE6062  960 bp
ATGCCATCTGCCTCTGCCATGATCATTTTCAACCTGAGCAGTTACAATCCAGGACCCTTC
ATTCTGGTAGGGATCCCAGGCCTGGAGCAATTCCATGTGTGGATTGGAATTCCCTTCTGT
ATCATCTACATTGTAGCTGTTGTGGGAAACTGCATCCTTCTCTACCTCATTGTGGTGGAG
CATAGTCTTCATGAACCCATGTTCTTCTTTCTCTCCATGCTGGCCATGACTGACCTCATC
TTGTCCACAGCTGGTGTGCCTAAAACACTCAGTATCTTTTGGCTAGGGGCTCGCGAAATC
ACATTCCCAGGATGCCTTACACAAATGTTCTTCCTTCACTATAACTTTGTCCTGGATTCA
GCCATTCTGATGGCCATGGCATTTGATCGCTATGTAGCTATCTGTTCTCCCTTGAGATAT
ACCACCATCTTGACTCCCAAGACCATCATCAAGAGTGCTATGGGCATCTCCTTTCGAAGC
TTCTGCATCATCCTGCCAGATGTATTCTTGCTGACATGCCTGCCTTTCTGCAGGACACGC
ATCATACCCCACACATACTGTGAGCATATAGGTGTTGCCCAGCTCGCCTGTGCTGATATC
TCCATCAACTTCTGGTATGGCTTTTGTGTTCCCATCATGACAGTCATCTCAGATGTGATT
CTCATTGCTGTTTCCTACGCACACATCCTCTGTGCTGTCTTTTGCCTTCCCTCCCAAGAT
GCCCGCCAGAAAGCCCTCGGCACTTGTGGTTCTCATGTCTGTGTCATCCTCATGTTTTAT
ACACCTGCCTTTTTCTCCATCCTCGCCCATCGCTTTGGACACAATGTCTCTCGCACCTTC
CACATCATGTTTGCCAATCTCTACATTGTTATCCCACCTGCACTCAACCCCATGGTTTAC
GGAGTGAAGACCAAGCAGATCAGAGATAAGGTTATACTTTTGTTTTCTAAGGGTACAGGA

ORF Protein

Cloned ORF protein sequence for pFN21AE6062 Download

>KIEE6062  320 aa
MPSASAMIIFNLSSYNPGPFILVGIPGLEQFHVWIGIPFCIIYIVAVVGNCILLYLIVVE
HSLHEPMFFFLSMLAMTDLILSTAGVPKTLSIFWLGAREITFPGCLTQMFFLHYNFVLDS
AILMAMAFDRYVAICSPLRYTTILTPKTIIKSAMGISFRSFCIILPDVFLLTCLPFCRTR
IIPHTYCEHIGVAQLACADISINFWYGFCVPIMTVISDVILIAVSYAHILCAVFCLPSQD
ARQKALGTCGSHVCVILMFYTPAFFSILAHRFGHNVSRTFHIMFANLYIVIPPALNPMVY
GVKTKQIRDKVILLFSKGTG

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6062 Download

>pFN21AE6062  5665 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCATCTGCCTCTGCCATGATCATTTTCAACCT
GAGCAGTTACAATCCAGGACCCTTCATTCTGGTAGGGATCCCAGGCCTGGAGCAATTCCA
TGTGTGGATTGGAATTCCCTTCTGTATCATCTACATTGTAGCTGTTGTGGGAAACTGCAT
CCTTCTCTACCTCATTGTGGTGGAGCATAGTCTTCATGAACCCATGTTCTTCTTTCTCTC
CATGCTGGCCATGACTGACCTCATCTTGTCCACAGCTGGTGTGCCTAAAACACTCAGTAT
CTTTTGGCTAGGGGCTCGCGAAATCACATTCCCAGGATGCCTTACACAAATGTTCTTCCT
TCACTATAACTTTGTCCTGGATTCAGCCATTCTGATGGCCATGGCATTTGATCGCTATGT
AGCTATCTGTTCTCCCTTGAGATATACCACCATCTTGACTCCCAAGACCATCATCAAGAG
TGCTATGGGCATCTCCTTTCGAAGCTTCTGCATCATCCTGCCAGATGTATTCTTGCTGAC
ATGCCTGCCTTTCTGCAGGACACGCATCATACCCCACACATACTGTGAGCATATAGGTGT
TGCCCAGCTCGCCTGTGCTGATATCTCCATCAACTTCTGGTATGGCTTTTGTGTTCCCAT
CATGACAGTCATCTCAGATGTGATTCTCATTGCTGTTTCCTACGCACACATCCTCTGTGC
TGTCTTTTGCCTTCCCTCCCAAGATGCCCGCCAGAAAGCCCTCGGCACTTGTGGTTCTCA
TGTCTGTGTCATCCTCATGTTTTATACACCTGCCTTTTTCTCCATCCTCGCCCATCGCTT
TGGACACAATGTCTCTCGCACCTTCCACATCATGTTTGCCAATCTCTACATTGTTATCCC
ACCTGCACTCAACCCCATGGTTTACGGAGTGAAGACCAAGCAGATCAGAGATAAGGTTAT
ACTTTTGTTTTCTAAGGGTACAGGAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT