SNX7 ORF clone FHC11381

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11381

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Clone info.

Species

human

Clone Name

pFN21AB6522 Sequence (with vector) Restriction Map

Product ID

FHC11381

Flexi Clone PID

FXC11381

ORF Sequence

DNA sequence (1161 bp)
Protein sequence (387 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528972]

Gene

KIBB6522

Symbol

SNX7

Description

sorting nexin 7

Original Clone ID

cs01122

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1161 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 387 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS755.2 4.3e-151 100.0 SNX7 CCDS756.2 3.4e-90 85.8 SNX7 CCDS43865.1 4.9e-72 49.3 SNX30 CCDS3032.1 3.4e-14 25.7 SNX4 CCDS32268.1 3.7e-13 23.4 SNX1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001683 35 146 PF00787 Phox homologous domain HMMSmart IPR001683 27 147 SM00312 Phox homologous domain ProfileScan IPR001683 30 151 PS50195 Phox homologous domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016856915 387 614904 100.0 100.0 XP_016856914 387 614904 100.0 100.0 XP_011539866 387 614904 100.0 100.0 XP_016856916 387 614904 100.0 100.0 XP_006710741 387 614904 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB6522 Download

>KIBB6522  1161 bp
ATGGACATGAACTCCTTCAGCCCTATGATGCCAACATCCCCTTTATCAATGATAAACCAA
ATCAAGTTTGAGGATGAACCAGATTTAAAGGATCTCTTCATCACAGTTGATGAACCTGAA
AGTCATGTTACTACAATAGAAACTTTCATTACGTATAGGATTATTACTAAGACATCTCGT
GGGGAATTTGACTCCAGTGAATTTGAAGTTAGGAGACGATATCAAGATTTCCTTTGGTTG
AAGGGAAAACTGGAAGAAGCACACCCCACTCTGATTATTCCACCATTGCCAGAAAAGTTT
ATAGTAAAAGGAATGGTGGAACGCTTTAACGATGACTTCATTGAGACACGCAGGAAGGCT
TTACATAAATTTTTGAACCGAATTGCTGATCATCCAACTTTAACATTTAATGAAGACTTC
AAAATTTTTCTCACTGCACAAGCTTGGGAACTCTCTTCTCACAAGAAGCAAGGTCCTGGC
TTGCTAAGCAGGATGGGGCAAACCGTCAGAGCTGTTGCGTCCTCAATGAGAGGAGTTAAA
AACCGCCCAGAGGAGTTCATGGAAATGAATAACTTTATTGAACTATTTAGCCAGAAAATA
AATTTGATAGATAAAATATCTCAGAGAATTTATAAGGAAGAAAGGGAATATTTTGATGAA
ATGAAAGAATATGGCCCAATTCATATTCTGTGGTCAGCGTCAGAAGAGGATCTGGTTGAT
ACTCTAAAGGATGTTGCCAGCTGCATTGACAGATGCTGTAAGGCCACTGAAAAGCGGATG
TCTGGACTCTCAGAGGCCCTGCTTCCTGTTGTACATGAATACGTGCTTTATAGTGAAATG
TTAATGGGTGTTATGAAAAGAAGAGACCAAATACAAGCAGAACTGGATTCCAAAGTTGAA
GTTTTGACCTATAAAAAGGCAGATACTGATCTGCTTCCAGAGGAGATTGGAAAACTTGAA
GATAAAGTGGAATGTGCTAATAATGCCCTGAAAGCAGATTGGGAGAGATGGAAACAAAAT
ATGCAAAATGATATCAAGTTAGCATTTACAGATATGGCTGAGGAGAATATCCATTATTAT
GAACAGTGCCTTGCTACGTGGGAATCATTCCTTACATCACAGACCAACCTTCACTTGGAA
GAAGCCTCTGAAGATAAACCT

ORF Protein

Cloned ORF protein sequence for pFN21AB6522 Download

>KIBB6522  387 aa
MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
EQCLATWESFLTSQTNLHLEEASEDKP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB6522 Download

>pFN21AB6522  5866 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGACATGAACTCCTTCAGCCCTATGATGCCAAC
ATCCCCTTTATCAATGATAAACCAAATCAAGTTTGAGGATGAACCAGATTTAAAGGATCT
CTTCATCACAGTTGATGAACCTGAAAGTCATGTTACTACAATAGAAACTTTCATTACGTA
TAGGATTATTACTAAGACATCTCGTGGGGAATTTGACTCCAGTGAATTTGAAGTTAGGAG
ACGATATCAAGATTTCCTTTGGTTGAAGGGAAAACTGGAAGAAGCACACCCCACTCTGAT
TATTCCACCATTGCCAGAAAAGTTTATAGTAAAAGGAATGGTGGAACGCTTTAACGATGA
CTTCATTGAGACACGCAGGAAGGCTTTACATAAATTTTTGAACCGAATTGCTGATCATCC
AACTTTAACATTTAATGAAGACTTCAAAATTTTTCTCACTGCACAAGCTTGGGAACTCTC
TTCTCACAAGAAGCAAGGTCCTGGCTTGCTAAGCAGGATGGGGCAAACCGTCAGAGCTGT
TGCGTCCTCAATGAGAGGAGTTAAAAACCGCCCAGAGGAGTTCATGGAAATGAATAACTT
TATTGAACTATTTAGCCAGAAAATAAATTTGATAGATAAAATATCTCAGAGAATTTATAA
GGAAGAAAGGGAATATTTTGATGAAATGAAAGAATATGGCCCAATTCATATTCTGTGGTC
AGCGTCAGAAGAGGATCTGGTTGATACTCTAAAGGATGTTGCCAGCTGCATTGACAGATG
CTGTAAGGCCACTGAAAAGCGGATGTCTGGACTCTCAGAGGCCCTGCTTCCTGTTGTACA
TGAATACGTGCTTTATAGTGAAATGTTAATGGGTGTTATGAAAAGAAGAGACCAAATACA
AGCAGAACTGGATTCCAAAGTTGAAGTTTTGACCTATAAAAAGGCAGATACTGATCTGCT
TCCAGAGGAGATTGGAAAACTTGAAGATAAAGTGGAATGTGCTAATAATGCCCTGAAAGC
AGATTGGGAGAGATGGAAACAAAATATGCAAAATGATATCAAGTTAGCATTTACAGATAT
GGCTGAGGAGAATATCCATTATTATGAACAGTGCCTTGCTACGTGGGAATCATTCCTTAC
ATCACAGACCAACCTTCACTTGGAAGAAGCCTCTGAAGATAAACCTGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT