WDR88 ORF clone FHC10731

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC10731

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Clone info.

Species

human

Clone Name

pFN21AE0056 Sequence (with vector) Restriction Map

Product ID

FHC10731

Flexi Clone PID

FXC10731

ORF Sequence

DNA sequence (1416 bp)
Protein sequence (472 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527326]

Gene

KIEE0056

Symbol

WDR88

Alias : PQWD

Description

WD repeat domain 88

Original Clone ID

oc00756

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1416 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 472 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12429.1 1e-153 100.0 WDR88 CCDS340.1 2e-15 26.3 SNRNP40 CCDS2470.1 2.9e-13 26.9 DAW1 CCDS31869.1 6.7e-11 28.9 POC1B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020472 117 131 PR00320 G-protein beta WD-40 repeat IPR020472 336 350 PR00320 G-protein beta WD-40 repeat IPR020472 378 392 PR00320 G-protein beta WD-40 repeat HMMPfam IPR019781 96 130 PF00400 WD40 repeat IPR002372 160 186 PF01011 Pyrrolo-quinoline quinone repeat IPR019781 188 211 PF00400 WD40 repeat IPR019781 227 258 PF00400 WD40 repeat IPR019781 265 301 PF00400 WD40 repeat IPR019781 312 349 PF00400 WD40 repeat IPR019781 356 391 PF00400 WD40 repeat HMMSmart IPR001680 91 130 SM00320 WD40 repeat IPR001680 133 173 SM00320 WD40 repeat IPR018391 152 184 SM00564 Pyrrolo-quinoline quinone beta-propeller repeat IPR001680 176 215 SM00320 WD40 repeat IPR001680 218 258 SM00320 WD40 repeat IPR001680 262 301 SM00320 WD40 repeat IPR001680 310 349 SM00320 WD40 repeat IPR001680 352 391 SM00320 WD40 repeat ProfileScan IPR019782 98 139 PS50082 WD40 repeat 2 IPR017986 98 400 PS50294 WD40-repeat-containing domain IPR019782 156 182 PS50082 WD40 repeat 2 IPR019782 226 267 PS50082 WD40 repeat 2 IPR019782 269 310 PS50082 WD40 repeat 2 IPR019782 317 358 PS50082 WD40 repeat 2 IPR019782 359 400 PS50082 WD40 repeat 2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0056 Download

>KIEE0056  1416 bp
ATGGCCTCCCCGCCGCGGTGCTCCCCGACAGCCCATGACAGGGAATGCAAGTTGCCGCCA
CCCTCCGCCCCCGCCAGCGAGTATTGTCCCGGCAAGCTGTCCTGGGGGACCATGGCGAGG
GCCTTAGGCCGCTTCAAGCTGTCGATCCCGCACACGCACCTGCTGGCCACCCTCGACCCC
CTGGCCTTGGACAGGGAACCACCACCGCATCTGTTGCCTGAGAAGCACCAGGTGCCGGAG
AAATTGATCTGGGGCGACCAGGACCCTCTCTCCAAGATCCCATTTAAAATTCTGAGTGGG
CACGAGCACGCTGTGAGCACCTGCCACTTCTGTGTGGATGACACAAAGCTCCTCAGTGGC
TCCTATGACTGCACTGTGAAGCTGTGGGATCCGGTGGACGGTTCTGTGGTTCGCGATTTT
GAGCACAGGCCCAAAGCTCCTGTTGTAGAGTGCAGCATCACCGGCGACAGCAGCAGAGTC
ATTGCCGCATCCTATGATAAGACAGTGAGGGCCTGGGACCTGGAGACAGGCAAGCTGCTG
TGGAAGGTCAGGTATGATACCTTCATCGTCTCCTGTAAGTTTTCTCCTGATGGTAAATAC
GTGGTCTCAGGCTTCGACGTGGATCATGGAATCTGCATAATGGACGCCGAGAACATCACC
ACCGTTTCCGTCATCAAAGATCATCACACAAGGTCCATCACGTCATGCTGCTTTGACCCC
GACAGCCAGAGGGTGGCTTCTGTCTCATTGGACAGGTGCATCAAGATCTGGGATGTTACA
TCCCAGGCCACGCTGCTCACCATCACTAAGGCACATTCCAATGCAATCTCAAACTGCTGT
TTTACCTTCAGTGGCCATTTCCTGTGTACAAGCTCCTGGGATAAAAACTTAAAAATATGG
AACGTCCACACAGGGGAGTTTCGAAACTGTGGAGCCTGTGTGACTCTGATGCAGGGCCAT
GAAGGTTCTGTCAGTTCCTGTCACTTTGCCAGAGACAGCTCTTTTCTCATTTCTGGAGGG
TTTGATAGGACTGTGGCTATTTGGGATGTAGCAGAAGGCTACCGGAAGCTCTCTTTGAAG
GGCCATAATGACTGGGTGATGGATGTTGCCATTAGCAACAACAAGAAATGGATCCTGTCT
GCTTCCAAGGATAGGACCATGAGACTGTGGAATATTGAAGAAATTGATGAAATTCCTTTG
GTAATCAAGTACAAAAAGGCCGTGGGCTTAAAGTTGAAACAGTGCGAAAGATGTGACAGG
CCTTTCTCCATCTTCAAGAGTGACACCTCTTCTGAAATGTTCACCCAATGCGTGTTCTGC
CGGATAGATACAAGGGGCTTGCCAGCAGATACTTCATCGTCATCATCATCATCGGAAAGG
GAGAACTCACCGCCGCCAAGGGGAAGCAAGGATGAC

ORF Protein

Cloned ORF protein sequence for pFN21AE0056 Download

>KIEE0056  472 aa
MASPPRCSPTAHDRECKLPPPSAPASEYCPGKLSWGTMARALGRFKLSIPHTHLLATLDP
LALDREPPPHLLPEKHQVPEKLIWGDQDPLSKIPFKILSGHEHAVSTCHFCVDDTKLLSG
SYDCTVKLWDPVDGSVVRDFEHRPKAPVVECSITGDSSRVIAASYDKTVRAWDLETGKLL
WKVRYDTFIVSCKFSPDGKYVVSGFDVDHGICIMDAENITTVSVIKDHHTRSITSCCFDP
DSQRVASVSLDRCIKIWDVTSQATLLTITKAHSNAISNCCFTFSGHFLCTSSWDKNLKIW
NVHTGEFRNCGACVTLMQGHEGSVSSCHFARDSSFLISGGFDRTVAIWDVAEGYRKLSLK
GHNDWVMDVAISNNKKWILSASKDRTMRLWNIEEIDEIPLVIKYKKAVGLKLKQCERCDR
PFSIFKSDTSSEMFTQCVFCRIDTRGLPADTSSSSSSSERENSPPPRGSKDD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0056 Download

>pFN21AE0056  6121 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCTCCCCGCCGCGGTGCTCCCCGACAGCCCA
TGACAGGGAATGCAAGTTGCCGCCACCCTCCGCCCCCGCCAGCGAGTATTGTCCCGGCAA
GCTGTCCTGGGGGACCATGGCGAGGGCCTTAGGCCGCTTCAAGCTGTCGATCCCGCACAC
GCACCTGCTGGCCACCCTCGACCCCCTGGCCTTGGACAGGGAACCACCACCGCATCTGTT
GCCTGAGAAGCACCAGGTGCCGGAGAAATTGATCTGGGGCGACCAGGACCCTCTCTCCAA
GATCCCATTTAAAATTCTGAGTGGGCACGAGCACGCTGTGAGCACCTGCCACTTCTGTGT
GGATGACACAAAGCTCCTCAGTGGCTCCTATGACTGCACTGTGAAGCTGTGGGATCCGGT
GGACGGTTCTGTGGTTCGCGATTTTGAGCACAGGCCCAAAGCTCCTGTTGTAGAGTGCAG
CATCACCGGCGACAGCAGCAGAGTCATTGCCGCATCCTATGATAAGACAGTGAGGGCCTG
GGACCTGGAGACAGGCAAGCTGCTGTGGAAGGTCAGGTATGATACCTTCATCGTCTCCTG
TAAGTTTTCTCCTGATGGTAAATACGTGGTCTCAGGCTTCGACGTGGATCATGGAATCTG
CATAATGGACGCCGAGAACATCACCACCGTTTCCGTCATCAAAGATCATCACACAAGGTC
CATCACGTCATGCTGCTTTGACCCCGACAGCCAGAGGGTGGCTTCTGTCTCATTGGACAG
GTGCATCAAGATCTGGGATGTTACATCCCAGGCCACGCTGCTCACCATCACTAAGGCACA
TTCCAATGCAATCTCAAACTGCTGTTTTACCTTCAGTGGCCATTTCCTGTGTACAAGCTC
CTGGGATAAAAACTTAAAAATATGGAACGTCCACACAGGGGAGTTTCGAAACTGTGGAGC
CTGTGTGACTCTGATGCAGGGCCATGAAGGTTCTGTCAGTTCCTGTCACTTTGCCAGAGA
CAGCTCTTTTCTCATTTCTGGAGGGTTTGATAGGACTGTGGCTATTTGGGATGTAGCAGA
AGGCTACCGGAAGCTCTCTTTGAAGGGCCATAATGACTGGGTGATGGATGTTGCCATTAG
CAACAACAAGAAATGGATCCTGTCTGCTTCCAAGGATAGGACCATGAGACTGTGGAATAT
TGAAGAAATTGATGAAATTCCTTTGGTAATCAAGTACAAAAAGGCCGTGGGCTTAAAGTT
GAAACAGTGCGAAAGATGTGACAGGCCTTTCTCCATCTTCAAGAGTGACACCTCTTCTGA
AATGTTCACCCAATGCGTGTTCTGCCGGATAGATACAAGGGGCTTGCCAGCAGATACTTC
ATCGTCATCATCATCATCGGAAAGGGAGAACTCACCGCCGCCAAGGGGAAGCAAGGATGA
CGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T