ZNF562 ORF clone FHC10418

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Halotag ORF Clone FHC10418

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Clone info.

Species

human

Clone Name

pFN21AE0750 Sequence (with vector) Restriction Map

Product ID

FHC10418

Flexi Clone PID

FXC10418

ORF Sequence

DNA sequence (1278 bp)
Protein sequence (426 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587532]

Gene

KIEE0750

Symbol

ZNF562

Description

zinc finger protein 562, transcript variant 1

Original Clone ID

cs02250

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1278 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 426 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS45956.1 9e-94 100.0 ZNF562 CCDS74280.1 3.8e-93 99.8 ZNF562 CCDS12216.2 9.3e-78 83.9 ZNF561 CCDS12217.1 6.7e-76 99.7 ZNF562 CCDS82286.1 1.2e-65 85.2 ZNF561 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001909 41 81 PF01352 Krueppel-associated box IPR007087 288 310 PF00096 Zinc finger IPR007087 316 338 PF00096 Zinc finger IPR007087 372 394 PF00096 Zinc finger HMMSmart IPR001909 41 96 SM00349 Krueppel-associated box IPR015880 125 145 SM00355 Zinc finger IPR015880 204 226 SM00355 Zinc finger IPR015880 263 282 SM00355 Zinc finger IPR015880 288 310 SM00355 Zinc finger IPR015880 316 338 SM00355 Zinc finger IPR015880 344 366 SM00355 Zinc finger IPR015880 372 394 SM00355 Zinc finger IPR015880 400 422 SM00355 Zinc finger ProfileScan IPR001909 41 120 PS50805 Krueppel-associated box IPR007087 125 152 PS50157 Zinc finger IPR007087 204 231 PS50157 Zinc finger IPR007087 230 259 PS50157 Zinc finger IPR007087 260 287 PS50157 Zinc finger IPR007087 288 315 PS50157 Zinc finger IPR007087 316 343 PS50157 Zinc finger IPR007087 344 371 PS50157 Zinc finger IPR007087 372 399 PS50157 Zinc finger IPR007087 400 426 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011511864 502 194648,615226 44.2 92.0 NP_001243209 501 194537 40.5 93.7 NP_001316584 455 194528 40.8 92.0 NP_001316579 456 194528 40.9 92.0 NP_001316581 456 194528 40.9 92.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0750 Download

>KIEE0750  1278 bp
ATGTCAGCCTTTGATATGTCCCATGGGTTTTTTCCCAGGGAACCAATCTGTCCTTTTGAA
GAAAAGACAAAGATAGGAACGATGGTAGAGGACCACCGGTCAAATTCTTACCAGGATTCA
GTGACGTTTGATGATGTGGCTGTGGAGTTCACCCCAGAGGAGTGGGCTTTACTGGACACA
ACTCAGAAATACCTCTACAGAGATGTGATGCTGGAGAACTACATGAACCTGGCCTCTGTG
GATTTCTTTTTCTGCTTAACTTCAGAATGGGAAATACAACCTAGAACCAAACGGTCATCA
CTTCAGCAGGGTTTTTTGAAGAATCAAATATTCACTGGGATACAAATGCAGACAAGAAGC
TACAGTGGATGGAAACTCTGTGAGAATTGTGGAGAGGTCTTCAGTGAACAGTTTTGCCTT
AAGACACACATGAGAGCTCAGAATGGAGGGAACACTTTTGAGGGTAATTGTTATGGAAAA
GACAGCATCAGTGTGCACAAGGAAGCCTCTATTGGACAAGAACTTTCCAAATTTAATCCA
TGTGGAAAAGTCTTCACCTTAACTCCAGGCCTTGCTGTGCATCTTGAAATTCTCAATGGA
AGACAACCCTACAAATGTAAGGAATGTGGAAAAGGCTTTAAGTATTTTGCAAGCCTTGAT
AATCACATGGGAATCCACATTGGAGAGAAACTCTGTGAATTTCAGGAATGTGAGAGAGCC
ATCACAACTTCCTCACACTTAAAGCAGTGTGTAGCAGTTCATACTGGAAAGAAATCCGAA
AAGACTAAGAACTGTGGGAAATCCTTCACTAATTTTTCTCAACTTTCTGCACATGCAAAA
ACTCATAAAGGAGAGAAGTCCTTTGAATGTAAAGAATGTGGAAGATCCTTTAGAAATTCC
TCATCCTTTAATGTTCACATTCAAATTCACACTGGAATAAAACCACACAAATGTACGGAA
TGTGGGAAAGCCTTCACTAGATCAACTCACCTTACTCAACATGTAAGAACTCACACTGGA
ATAAAACCCTATGAATGTAAGGAATGTGGCCAAGCCTTCACTCAGTACACGGGCCTTGCT
ATACACATACGAAATCACACTGGAGAGAAACCCTATCAGTGTAAGGAATGTGGGAAAGCC
TTCAATAGATCTTCAACGCTTACTCAACATAGAAGAATTCACACAGGAGAGAAGCCTTAT
GAATGTGTTGAATGTGGGAAGACCTTCATTACTTCTTCCCATCGTAGTAAACATTTGAAA
ACTCACAGTGGAGAAAGG

ORF Protein

Cloned ORF protein sequence for pFN21AE0750 Download

>KIEE0750  426 aa
MSAFDMSHGFFPREPICPFEEKTKIGTMVEDHRSNSYQDSVTFDDVAVEFTPEEWALLDT
TQKYLYRDVMLENYMNLASVDFFFCLTSEWEIQPRTKRSSLQQGFLKNQIFTGIQMQTRS
YSGWKLCENCGEVFSEQFCLKTHMRAQNGGNTFEGNCYGKDSISVHKEASIGQELSKFNP
CGKVFTLTPGLAVHLEILNGRQPYKCKECGKGFKYFASLDNHMGIHIGEKLCEFQECERA
ITTSSHLKQCVAVHTGKKSEKTKNCGKSFTNFSQLSAHAKTHKGEKSFECKECGRSFRNS
SSFNVHIQIHTGIKPHKCTECGKAFTRSTHLTQHVRTHTGIKPYECKECGQAFTQYTGLA
IHIRNHTGEKPYQCKECGKAFNRSSTLTQHRRIHTGEKPYECVECGKTFITSSHRSKHLK
THSGER

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0750 Download

>pFN21AE0750  5983 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCAGCCTTTGATATGTCCCATGGGTTTTTTCC
CAGGGAACCAATCTGTCCTTTTGAAGAAAAGACAAAGATAGGAACGATGGTAGAGGACCA
CCGGTCAAATTCTTACCAGGATTCAGTGACGTTTGATGATGTGGCTGTGGAGTTCACCCC
AGAGGAGTGGGCTTTACTGGACACAACTCAGAAATACCTCTACAGAGATGTGATGCTGGA
GAACTACATGAACCTGGCCTCTGTGGATTTCTTTTTCTGCTTAACTTCAGAATGGGAAAT
ACAACCTAGAACCAAACGGTCATCACTTCAGCAGGGTTTTTTGAAGAATCAAATATTCAC
TGGGATACAAATGCAGACAAGAAGCTACAGTGGATGGAAACTCTGTGAGAATTGTGGAGA
GGTCTTCAGTGAACAGTTTTGCCTTAAGACACACATGAGAGCTCAGAATGGAGGGAACAC
TTTTGAGGGTAATTGTTATGGAAAAGACAGCATCAGTGTGCACAAGGAAGCCTCTATTGG
ACAAGAACTTTCCAAATTTAATCCATGTGGAAAAGTCTTCACCTTAACTCCAGGCCTTGC
TGTGCATCTTGAAATTCTCAATGGAAGACAACCCTACAAATGTAAGGAATGTGGAAAAGG
CTTTAAGTATTTTGCAAGCCTTGATAATCACATGGGAATCCACATTGGAGAGAAACTCTG
TGAATTTCAGGAATGTGAGAGAGCCATCACAACTTCCTCACACTTAAAGCAGTGTGTAGC
AGTTCATACTGGAAAGAAATCCGAAAAGACTAAGAACTGTGGGAAATCCTTCACTAATTT
TTCTCAACTTTCTGCACATGCAAAAACTCATAAAGGAGAGAAGTCCTTTGAATGTAAAGA
ATGTGGAAGATCCTTTAGAAATTCCTCATCCTTTAATGTTCACATTCAAATTCACACTGG
AATAAAACCACACAAATGTACGGAATGTGGGAAAGCCTTCACTAGATCAACTCACCTTAC
TCAACATGTAAGAACTCACACTGGAATAAAACCCTATGAATGTAAGGAATGTGGCCAAGC
CTTCACTCAGTACACGGGCCTTGCTATACACATACGAAATCACACTGGAGAGAAACCCTA
TCAGTGTAAGGAATGTGGGAAAGCCTTCAATAGATCTTCAACGCTTACTCAACATAGAAG
AATTCACACAGGAGAGAAGCCTTATGAATGTGTTGAATGTGGGAAGACCTTCATTACTTC
TTCCCATCGTAGTAAACATTTGAAAACTCACAGTGGAGAAAGGGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT