GIPC2 ORF clone FHC03931

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03931

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Clone info.

Species

human

Clone Name

pFN21AE0741 Sequence (with vector) Restriction Map

Product ID

FHC03931

Flexi Clone PID

FXC03931

ORF Sequence

DNA sequence (945 bp)
Protein sequence (315 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528004]

Gene

KIEE0741

Symbol

GIPC2

Alias : SEMCAP-2, SEMCAP2

Description

GIPC PDZ domain containing family, member 2, transcript variant 1

Original Clone ID

cs02241

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 945 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 315 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS685.1 2.9e-118 100.0 GIPC2 CCDS12310.1 3.9e-71 61.7 GIPC1 CCDS32871.1 6.9e-62 57.4 GIPC3 CCDS12311.1 5.4e-59 69.0 GIPC1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001478 118 189 PF00595 PDZ/DHR/GLGF HMMSmart IPR001478 125 199 SM00228 PDZ/DHR/GLGF ProfileScan IPR001478 117 184 PS50106 PDZ/DHR/GLGF
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_974197 333 605072 61.7 98.7 XP_016881636 333 605072 61.7 98.7 NP_005707 333 605072 61.7 98.7 NP_974199 333 605072 61.7 98.7 NP_573568 312 601869,608792 57.4 96.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0741 Download

>KIEE0741  945 bp
ATGCCCCTGAAGCTGCGGGGGAAGAAGAAGGCCAAGTCCAAGGAGACCGCCGGGCTGGTG
GAGGGCGAGCCGACGGGCGCGGGCGGCGGGAGCCTCTCAGCGTCCCGGGCTCCCGCACGC
AGGCTGGTCTTCCACGCGCAGCTGGCGCACGGTAGTGCCACGGGCCGAGTGGAGGGCTTC
TCCAGCATCCAGGAGCTCTACGCCCAGATCGCGGGCGCGTTTGAAATCTCGCCGTCGGAG
ATCTTATATTGCACTTTAAACACACCTAAAATTGACATGGAAAGACTCTTAGGAGGACAA
CTAGGACTAGAAGATTTCATATTTGCCCATGTGAAAGGAATCGAAAAAGAAGTGAATGTG
TATAAATCTGAGGATTCACTTGGTCTCACCATTACAGATAATGGTGTTGGCTATGCTTTT
ATAAAGAGAATTAAAGATGGTGGTGTTATTGACTCAGTTAAAACAATCTGTGTTGGGGAT
CATATTGAATCCATAAATGGAGAAAATATTGTTGGGTGGCGTCACTATGATGTTGCTAAG
AAGTTAAAGGAATTAAAAAAGGAGGAACTCTTTACTATGAAGTTAATAGAACCTAAGAAG
GCATTTGAAATAGAGCTGAGGTCAAAGGCTGGAAAGTCATCAGGAGAAAAAATTGGTTGT
GGAAGGGCAACACTTCGCCTGAGATCAAAAGGTCCTGCCACCGTGGAAGAAATGCCTTCT
GAAACCAAAGCAAAGGCAATTGAAAAGATTGATGATGTTCTTGAGTTGTACATGGGAATT
CGAGATATTGATTTAGCCACCACAATGTTTGAAGCTGGAAAGGACAAAGTAAATCCAGAT
GAATTTGCTGTGGCACTTGACGAAACTCTTGGAGACTTTGCGTTCCCAGACGAATTTGTC
TTTGATGTTTGGGGAGTCATTGGTGATGCCAAACGAAGAGGATTA

ORF Protein

Cloned ORF protein sequence for pFN21AE0741 Download

>KIEE0741  315 aa
MPLKLRGKKKAKSKETAGLVEGEPTGAGGGSLSASRAPARRLVFHAQLAHGSATGRVEGF
SSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLGLEDFIFAHVKGIEKEVNV
YKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAK
KLKELKKEELFTMKLIEPKKAFEIELRSKAGKSSGEKIGCGRATLRLRSKGPATVEEMPS
ETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDKVNPDEFAVALDETLGDFAFPDEFV
FDVWGVIGDAKRRGL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0741 Download

>pFN21AE0741  5650 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCCCTGAAGCTGCGGGGGAAGAAGAAGGCCAA
GTCCAAGGAGACCGCCGGGCTGGTGGAGGGCGAGCCGACGGGCGCGGGCGGCGGGAGCCT
CTCAGCGTCCCGGGCTCCCGCACGCAGGCTGGTCTTCCACGCGCAGCTGGCGCACGGTAG
TGCCACGGGCCGAGTGGAGGGCTTCTCCAGCATCCAGGAGCTCTACGCCCAGATCGCGGG
CGCGTTTGAAATCTCGCCGTCGGAGATCTTATATTGCACTTTAAACACACCTAAAATTGA
CATGGAAAGACTCTTAGGAGGACAACTAGGACTAGAAGATTTCATATTTGCCCATGTGAA
AGGAATCGAAAAAGAAGTGAATGTGTATAAATCTGAGGATTCACTTGGTCTCACCATTAC
AGATAATGGTGTTGGCTATGCTTTTATAAAGAGAATTAAAGATGGTGGTGTTATTGACTC
AGTTAAAACAATCTGTGTTGGGGATCATATTGAATCCATAAATGGAGAAAATATTGTTGG
GTGGCGTCACTATGATGTTGCTAAGAAGTTAAAGGAATTAAAAAAGGAGGAACTCTTTAC
TATGAAGTTAATAGAACCTAAGAAGGCATTTGAAATAGAGCTGAGGTCAAAGGCTGGAAA
GTCATCAGGAGAAAAAATTGGTTGTGGAAGGGCAACACTTCGCCTGAGATCAAAAGGTCC
TGCCACCGTGGAAGAAATGCCTTCTGAAACCAAAGCAAAGGCAATTGAAAAGATTGATGA
TGTTCTTGAGTTGTACATGGGAATTCGAGATATTGATTTAGCCACCACAATGTTTGAAGC
TGGAAAGGACAAAGTAAATCCAGATGAATTTGCTGTGGCACTTGACGAAACTCTTGGAGA
CTTTGCGTTCCCAGACGAATTTGTCTTTGATGTTTGGGGAGTCATTGGTGATGCCAAACG
AAGAGGATTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG
CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG
CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA
AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT
TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT
AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT
TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG
CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT
TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA
AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT
CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT
CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT
TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT
TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC
GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC
TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT
GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG
AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG
GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA
ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA
CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT
CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC
ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG
AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT
AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA
AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA
AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC
TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA
CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC
CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT
CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT
GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG
AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA
GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT
ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA
GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT
GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA
CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT
CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT
GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG
TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC
GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC
GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT
GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG
ATCGAGATCT