RBMXL2 ORF clone FHC03891

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03891

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Clone info.

Species

human

Clone Name

pFN21AE0664 Sequence (with vector) Restriction Map

Product ID

FHC03891

Flexi Clone PID

FXC03891

ORF Sequence

DNA sequence (1176 bp)
Protein sequence (392 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527964]

Gene

KIEE0664

Symbol

RBMXL2

Alias : HNRNPG-T, HNRNPGT, HNRPGT

Description

RNA binding motif protein, X-linked-like 2

Original Clone ID

cs02164

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1176 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 392 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7777.1 2.9e-72 99.5 RBMXL2 CCDS14661.1 1e-48 73.2 RBMX CCDS716.1 2e-44 68.9 RBMXL1 CCDS55478.1 6.5e-22 55.4 RBMXL3 CCDS83521.1 8e-20 46.8 RBMY1D The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 10 80 PF00076 RNA recognition motif domain IPR012604 173 217 PF08081 RBM1CTR HMMSmart IPR003954 9 82 SM00361 RNA recognition motif domain IPR000504 9 82 SM00360 RNA recognition motif domain ProfileScan IPR000504 8 86 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055284 392 605444 99.5 100.0 NP_002130 391 300199,300238 73.2 100.0 XP_011529740 385 400006,415000 47.6 100.0 NP_001307873 459 400006,415000 46.8 94.4 XP_011529739 422 400006,415000 47.1 93.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0664 Download

>KIEE0664  1176 bp
ATGGTTGAAGCGGATCGCCCGGGGAAGCTGTTCATTGGGGGCCTCAACCTCGAAACCGAC
GAGAAAGCCCTCGAAGCCGAGTTTGGCAAGTATGGCCGCATCGTCGAGGTGCTCCTGATG
AAAGACCGAGAAACCAACAAGTCGAGGGGCTTCGCGTTCGTCACCTTTGAAAGCCCCGCA
GACGCCAAGGCCGCCGTCAGAGACATGAACGGCAAGTCCCTGGATGGTAAGGCCATCAAG
GTGGCCCAGGCCACCAAACCGGCGTTCGAGAGCAGCCGGCGGGGCCCGCCGCCTCCCCGC
AGCCGCGGTCGCCCGAGGTTCCTGCGCGGAACCCGCGGGGGTGGCGGCGGCCCGCGGCGT
TCCCCATCCCGGGGCGGGCCCGATGATGACGGCGGCTACGCGGCGGATTTCGACCTGCGG
CCCTCCAGGGCCCCGATGCCCATGAAGCGTGGGCCGCCGCCGCGCAGGGTCGGCCCACCC
CCCAAGAGGGCCGCGCCGTCGGGCCCGGCTCGCAGCAGCGGCGGTGGAATGCGCGGGAGG
GCCCTGGCCGTGCGGGGGCGAGACGGCTACTCAGGCCCACCGCGCCGGGAGCCGCTGCCC
CCGCGCCGCGACCCCTACCTGGGCCCGCGGGATGAGGGCTACTCGTCCAGAGACGGCTAC
TCGAGCCGAGACTACCGCGAACCCCGGGGTTTTGCCCCCTCGCCCGGAGAGTACACCCAC
CGCGATTACGGCCACTCCAGTGTCCGGGACGACTGTCCCTTGAGAGGCTACAGCGACCGA
GACGGCTACGGAGGTCGCGACCGTGACTACGGGGATCATCTGAGCAGAGGCTCCCATCGA
GAGCCCTTTGAGAGCTACGGAGAGCTGCGCGGCGCCGCCCCAGGACGGGGGACACCGCCA
TCTTACGGAGGAGGAGGCCGCTACGAGGAGTACCGGGGCTACTCACCCGATGCCTACAGC
GGCGGCCGCGACAGTTACAGCAGCAGTTATGGCCGGAGCGACCGCTACTCGAGGGGCCGA
CACCGGGTGGGCAGACCAGATCGTGGGCTCTCTCTGTCCATGGAAAGGGGCTGCCCTCCC
CAGCGTGATTCTTACAGCCGGTCAGGCTGCAGGGTGCCCAGGGGCGGAGGCCGTCTAGGA
GGCCGCTTGGAGAGAGGAGGAGGCCGGAGCAGATAC

ORF Protein

Cloned ORF protein sequence for pFN21AE0664 Download

>KIEE0664  392 aa
MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKAAVRDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGGGGPRR
SPSRGGPDDDGGYAADFDLRPSRAPMPMKRGPPPRRVGPPPKRAAPSGPARSSGGGMRGR
ALAVRGRDGYSGPPRREPLPPRRDPYLGPRDEGYSSRDGYSSRDYREPRGFAPSPGEYTH
RDYGHSSVRDDCPLRGYSDRDGYGGRDRDYGDHLSRGSHREPFESYGELRGAAPGRGTPP
SYGGGGRYEEYRGYSPDAYSGGRDSYSSSYGRSDRYSRGRHRVGRPDRGLSLSMERGCPP
QRDSYSRSGCRVPRGGGRLGGRLERGGGRSRY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0664 Download

>pFN21AE0664  5881 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGTTGAAGCGGATCGCCCGGGGAAGCTGTTCAT
TGGGGGCCTCAACCTCGAAACCGACGAGAAAGCCCTCGAAGCCGAGTTTGGCAAGTATGG
CCGCATCGTCGAGGTGCTCCTGATGAAAGACCGAGAAACCAACAAGTCGAGGGGCTTCGC
GTTCGTCACCTTTGAAAGCCCCGCAGACGCCAAGGCCGCCGTCAGAGACATGAACGGCAA
GTCCCTGGATGGTAAGGCCATCAAGGTGGCCCAGGCCACCAAACCGGCGTTCGAGAGCAG
CCGGCGGGGCCCGCCGCCTCCCCGCAGCCGCGGTCGCCCGAGGTTCCTGCGCGGAACCCG
CGGGGGTGGCGGCGGCCCGCGGCGTTCCCCATCCCGGGGCGGGCCCGATGATGACGGCGG
CTACGCGGCGGATTTCGACCTGCGGCCCTCCAGGGCCCCGATGCCCATGAAGCGTGGGCC
GCCGCCGCGCAGGGTCGGCCCACCCCCCAAGAGGGCCGCGCCGTCGGGCCCGGCTCGCAG
CAGCGGCGGTGGAATGCGCGGGAGGGCCCTGGCCGTGCGGGGGCGAGACGGCTACTCAGG
CCCACCGCGCCGGGAGCCGCTGCCCCCGCGCCGCGACCCCTACCTGGGCCCGCGGGATGA
GGGCTACTCGTCCAGAGACGGCTACTCGAGCCGAGACTACCGCGAACCCCGGGGTTTTGC
CCCCTCGCCCGGAGAGTACACCCACCGCGATTACGGCCACTCCAGTGTCCGGGACGACTG
TCCCTTGAGAGGCTACAGCGACCGAGACGGCTACGGAGGTCGCGACCGTGACTACGGGGA
TCATCTGAGCAGAGGCTCCCATCGAGAGCCCTTTGAGAGCTACGGAGAGCTGCGCGGCGC
CGCCCCAGGACGGGGGACACCGCCATCTTACGGAGGAGGAGGCCGCTACGAGGAGTACCG
GGGCTACTCACCCGATGCCTACAGCGGCGGCCGCGACAGTTACAGCAGCAGTTATGGCCG
GAGCGACCGCTACTCGAGGGGCCGACACCGGGTGGGCAGACCAGATCGTGGGCTCTCTCT
GTCCATGGAAAGGGGCTGCCCTCCCCAGCGTGATTCTTACAGCCGGTCAGGCTGCAGGGT
GCCCAGGGGCGGAGGCCGTCTAGGAGGCCGCTTGGAGAGAGGAGGAGGCCGGAGCAGATA
CGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T