PAG1 ORF clone FHC03470

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03470

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Clone info.

Species

human

Clone Name

pFN21AB6612 Sequence (with vector) Restriction Map

Product ID

FHC03470

Flexi Clone PID

FXC03470

ORF Sequence

DNA sequence (1296 bp)
Protein sequence (432 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527554]

Gene

KIBB6612

Symbol

PAG1

Alias : CBP, PAG

Description

phosphoprotein membrane anchor with glycosphingolipid microdomains 1

Original Clone ID

cs01212

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1296 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 432 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6227.1 3.5e-139 100.0 PAG1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition BlastProDom NULL 1 432 PD340439 NULL
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 18 WGSLAAVAIFFVITFLIFLCSS 39 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016869129 432 605767 100.0 100.0 XP_016869131 432 605767 100.0 100.0 XP_016869132 432 605767 100.0 100.0 XP_016869130 432 605767 100.0 100.0 NP_060910 432 605767 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB6612 Download

>KIBB6612  1296 bp
ATGGGGCCCGCGGGGAGCCTGCTGGGCAGCGGACAGATGCAGATCACCCTGTGGGGAAGT
CTGGCTGCTGTCGCCATTTTCTTCGTCATCACCTTCCTCATCTTCCTGTGCTCTAGTTGT
GACAGGGAAAAGAAGCCGCGACAGCATAGTGGGGACCATGAGAACCTGATGAACGTGCCT
TCAGACAAGGAGATGTTCAGCCGTTCAGTTACTAGCCTGGCAACAGATGCTCCTGCCAGC
AGTGAGCAGAATGGGGCACTCACCAATGGGGACATTCTTTCAGAGGACAGTACTCTGACC
TGCATGCAGCATTACGAGGAAGTCCAGACATCGGCCTCGGATCTGCTGGATTCCCAGGAC
AGCACAGGGAAACCAAAATGTCATCAGAGTCGGGAGCTGCCCAGAATCCCTCCCGAGAGC
GCAGTGGATACCATGCTCACGGCGAGAAGTGTGGACGGGGACCAGGGGCTGGGGATGGAA
GGGCCCTATGAAGTGCTCAAGGACAGCTCCTCCCAAGAAAACATGGTGGAGGACTGCTTG
TATGAAACTGTGAAAGAGATCAAGGAGGTGGCTGCAGCTGCACACCTGGAGAAAGGCCAC
AGTGGCAAGGCAAAATCTACTTCTGCCTCGAAAGAGCTCCCAGGGCCCCAGACTGAAGGC
AAAGCTGAGTTTGCTGAATATGCCTCGGTGGACAGAAACAAAAAATGTCGTCAAAGTGTT
AATGTAGAGAGTATCCTTGGAAATTCATGTGATCCAGAAGAGGAGGCCCCACCACCTGTC
CCTGTTAAGCTTCTGGACGAGAATGAAAACCTTCAGGAGAAGGAAGGGGGAGAGGCGGAA
GAGAGTGCCACAGACACGACCAGTGAAACTAACAAGAGATTTAGCTCATTGTCATACAAG
TCTCGGGAAGAAGACCCCACTCTCACAGAAGAAGAGATCTCAGCTATGTACTCATCAGTA
AATAAACCTGGACAGTTAGTGAATAAATCGGGGCAGTCGCTTACAGTTCCGGAGTCCACC
TACACCTCCATTCAAGGGGACCCACAGAGGTCACCCTCCTCCTGTAATGATCTCTATGCT
ACTGTTAAAGACTTCGAAAAAACTCCAAACAGCACACTTCCACCAGCAGGGAGGCCCAGC
GAGGAGCCAGAGCCTGATTATGAAGCGATACAGACTCTCAACAGAGAGGAAGAAAAGGCC
ACCCTGGGGACCAATGGCCACCACGGTCTCGTCCCAAAGGAGAACGACTACGAGAGCATA
AGTGACTTGCAGCAAGGCAGAGATATTACCAGGCTC

ORF Protein

Cloned ORF protein sequence for pFN21AB6612 Download

>KIBB6612  432 aa
MGPAGSLLGSGQMQITLWGSLAAVAIFFVITFLIFLCSSCDREKKPRQHSGDHENLMNVP
SDKEMFSRSVTSLATDAPASSEQNGALTNGDILSEDSTLTCMQHYEEVQTSASDLLDSQD
STGKPKCHQSRELPRIPPESAVDTMLTARSVDGDQGLGMEGPYEVLKDSSSQENMVEDCL
YETVKEIKEVAAAAHLEKGHSGKAKSTSASKELPGPQTEGKAEFAEYASVDRNKKCRQSV
NVESILGNSCDPEEEAPPPVPVKLLDENENLQEKEGGEAEESATDTTSETNKRFSSLSYK
SREEDPTLTEEEISAMYSSVNKPGQLVNKSGQSLTVPESTYTSIQGDPQRSPSSCNDLYA
TVKDFEKTPNSTLPPAGRPSEEPEPDYEAIQTLNREEEKATLGTNGHHGLVPKENDYESI
SDLQQGRDITRL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB6612 Download

>pFN21AB6612  6001 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGGCCCGCGGGGAGCCTGCTGGGCAGCGGACA
GATGCAGATCACCCTGTGGGGAAGTCTGGCTGCTGTCGCCATTTTCTTCGTCATCACCTT
CCTCATCTTCCTGTGCTCTAGTTGTGACAGGGAAAAGAAGCCGCGACAGCATAGTGGGGA
CCATGAGAACCTGATGAACGTGCCTTCAGACAAGGAGATGTTCAGCCGTTCAGTTACTAG
CCTGGCAACAGATGCTCCTGCCAGCAGTGAGCAGAATGGGGCACTCACCAATGGGGACAT
TCTTTCAGAGGACAGTACTCTGACCTGCATGCAGCATTACGAGGAAGTCCAGACATCGGC
CTCGGATCTGCTGGATTCCCAGGACAGCACAGGGAAACCAAAATGTCATCAGAGTCGGGA
GCTGCCCAGAATCCCTCCCGAGAGCGCAGTGGATACCATGCTCACGGCGAGAAGTGTGGA
CGGGGACCAGGGGCTGGGGATGGAAGGGCCCTATGAAGTGCTCAAGGACAGCTCCTCCCA
AGAAAACATGGTGGAGGACTGCTTGTATGAAACTGTGAAAGAGATCAAGGAGGTGGCTGC
AGCTGCACACCTGGAGAAAGGCCACAGTGGCAAGGCAAAATCTACTTCTGCCTCGAAAGA
GCTCCCAGGGCCCCAGACTGAAGGCAAAGCTGAGTTTGCTGAATATGCCTCGGTGGACAG
AAACAAAAAATGTCGTCAAAGTGTTAATGTAGAGAGTATCCTTGGAAATTCATGTGATCC
AGAAGAGGAGGCCCCACCACCTGTCCCTGTTAAGCTTCTGGACGAGAATGAAAACCTTCA
GGAGAAGGAAGGGGGAGAGGCGGAAGAGAGTGCCACAGACACGACCAGTGAAACTAACAA
GAGATTTAGCTCATTGTCATACAAGTCTCGGGAAGAAGACCCCACTCTCACAGAAGAAGA
GATCTCAGCTATGTACTCATCAGTAAATAAACCTGGACAGTTAGTGAATAAATCGGGGCA
GTCGCTTACAGTTCCGGAGTCCACCTACACCTCCATTCAAGGGGACCCACAGAGGTCACC
CTCCTCCTGTAATGATCTCTATGCTACTGTTAAAGACTTCGAAAAAACTCCAAACAGCAC
ACTTCCACCAGCAGGGAGGCCCAGCGAGGAGCCAGAGCCTGATTATGAAGCGATACAGAC
TCTCAACAGAGAGGAAGAAAAGGCCACCCTGGGGACCAATGGCCACCACGGTCTCGTCCC
AAAGGAGAACGACTACGAGAGCATAAGTGACTTGCAGCAAGGCAGAGATATTACCAGGCT
CGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T