NDN ORF clone FHC03337

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC03337

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Clone info.

Species

human

Clone Name

pFN21AB9826 Sequence (with vector) Restriction Map

Product ID

FHC03337

Flexi Clone PID

FXC03337

ORF Sequence

DNA sequence (963 bp)
Protein sequence (321 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464627]

Gene

KIBB9826

Symbol

NDN

Alias : HsT16328, PWCR

Description

necdin, melanoma antigen (MAGE) family member

Original Clone ID

cp00395

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 963 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 321 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10014.1 2.4e-65 100.0 NDN CCDS14362.1 6.8e-16 42.1 MAGED2 CCDS10023.1 1.6e-15 39.9 NSMCE3 CCDS3269.1 5.5e-15 40.3 MAGEF1 CCDS59527.1 5.5e-15 44.5 TRO The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002190 105 275 PF01454 MAGE protein ProfileScan IPR002190 98 297 PS50838 MAGE protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002478 321 176270,602117 100.0 100.0 NP_619649 304 608243 39.9 80.4 NP_071432 307 609267 40.3 88.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9826 Download

>KIBB9826  963 bp
ATGTCAGAACAAAGTAAGGATCTGAGCGACCCTAACTTTGCAGCCGAGGCCCCCAACTCC
GAGGTGCACAGCAGCCCTGGGGTTTCGGAGGGGGTTCCTCCGTCCGCGACCCTGGCAGAG
CCGCAGAGCCCTCCTCTAGGCCCGACGGCCGCTCCGCAGGCCGCGCCGCCTCCCCAGGCC
CCGAACGACGAGGGCGACCCGAAGGCCCTGCAGCAGGCTGCGGAGGAGGGCCGCGCCCAC
CAGGCCCCGAGCGCGGCCCAGCCGGGCCCGGCACCGCCAGCCCCGGCGCAGCTGGTGCAG
AAGGCGCACGAGCTCATGTGGTACGTGCTGGTCAAGGACCAGAAGAAGATGATCATCTGG
TTTCCAGACATGGTGAAAGATGTCATCGGCAGCTACAAGAAGTGGTGCAGGAGCATCCTC
CGGCGCACCAGCCTCATCCTCGCCCGGGTGTTCGGGCTGCACCTGAGGCTAACCAGCCTG
CACACCATGGAGTTTGCGCTGGTCAAAGCGCTGGAGCCCGAGGAGCTGGACAGGGTGGCG
CTGAGCAACCGCATGCCCATGACAGGCCTCCTGCTCATGATCCTGAGCCTCATCTACGTG
AAGGGCCGCGGCGCCAGAGAGAGCGCCGTCTGGAACGTGCTGCGCATCCTGGGGCTGCGG
CCCTGGAAGAAGCACTCCACCTTCGGGGACGTGCGGAAGCTCATCACTGAGGAGTTCGTC
CAAATGAATTACCTGAAGTACCAGCGCGTCCCATACGTGGAGCCGCCCGAATACGAGTTC
TTTTGGGGCTCCCGGGCCAGCCGCGAAATCACCAAGATGCAAATCATGGAGTTCCTGGCC
AGGGTCTTTAAGAAAGACCCCCAGGCCTGGCCCTCCCGATACAGAGAAGCTCTGGAGGAG
GCCAGAGCTCTGCGGGAGGCTAATCCCACTGCCCACTACCCTCGCAGCAGTGTCTCTGAG
GAC

ORF Protein

Cloned ORF protein sequence for pFN21AB9826 Download

>KIBB9826  321 aa
MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQA
PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW
FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA
LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV
QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE
ARALREANPTAHYPRSSVSED

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9826 Download

>pFN21AB9826  5668 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCAGAACAAAGTAAGGATCTGAGCGACCCTAA
CTTTGCAGCCGAGGCCCCCAACTCCGAGGTGCACAGCAGCCCTGGGGTTTCGGAGGGGGT
TCCTCCGTCCGCGACCCTGGCAGAGCCGCAGAGCCCTCCTCTAGGCCCGACGGCCGCTCC
GCAGGCCGCGCCGCCTCCCCAGGCCCCGAACGACGAGGGCGACCCGAAGGCCCTGCAGCA
GGCTGCGGAGGAGGGCCGCGCCCACCAGGCCCCGAGCGCGGCCCAGCCGGGCCCGGCACC
GCCAGCCCCGGCGCAGCTGGTGCAGAAGGCGCACGAGCTCATGTGGTACGTGCTGGTCAA
GGACCAGAAGAAGATGATCATCTGGTTTCCAGACATGGTGAAAGATGTCATCGGCAGCTA
CAAGAAGTGGTGCAGGAGCATCCTCCGGCGCACCAGCCTCATCCTCGCCCGGGTGTTCGG
GCTGCACCTGAGGCTAACCAGCCTGCACACCATGGAGTTTGCGCTGGTCAAAGCGCTGGA
GCCCGAGGAGCTGGACAGGGTGGCGCTGAGCAACCGCATGCCCATGACAGGCCTCCTGCT
CATGATCCTGAGCCTCATCTACGTGAAGGGCCGCGGCGCCAGAGAGAGCGCCGTCTGGAA
CGTGCTGCGCATCCTGGGGCTGCGGCCCTGGAAGAAGCACTCCACCTTCGGGGACGTGCG
GAAGCTCATCACTGAGGAGTTCGTCCAAATGAATTACCTGAAGTACCAGCGCGTCCCATA
CGTGGAGCCGCCCGAATACGAGTTCTTTTGGGGCTCCCGGGCCAGCCGCGAAATCACCAA
GATGCAAATCATGGAGTTCCTGGCCAGGGTCTTTAAGAAAGACCCCCAGGCCTGGCCCTC
CCGATACAGAGAAGCTCTGGAGGAGGCCAGAGCTCTGCGGGAGGCTAATCCCACTGCCCA
CTACCCTCGCAGCAGTGTCTCTGAGGACGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT