OR6C3 ORF clone FHC02472

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Halotag ORF Clone FHC02472

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Clone info.

Species

human

Clone Name

pFN21AB7446 Sequence (with vector) Restriction Map

Product ID

FHC02472

Flexi Clone PID

FXC02472

ORF Sequence

DNA sequence (933 bp)
Protein sequence (311 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463979]

Gene

KIBB7446

Symbol

OR6C3

Alias : OST709

Description

olfactory receptor, family 6, subfamily C, member 3

Original Clone ID

oc00660

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 933 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 311 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31819.1 4.9e-78 100.0 OR6C3 CCDS31818.1 1.9e-60 74.8 OR6C1 CCDS31820.1 3.1e-58 71.9 OR6C75 CCDS31823.1 1.8e-56 73.4 OR6C76 CCDS31816.1 1.3e-55 68.8 OR6C74 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 23 47 PR00237 GPCR IPR000725 89 100 PR00245 Olfactory receptor IPR000276 101 123 PR00237 GPCR IPR000725 126 138 PR00245 Olfactory receptor IPR000276 137 158 PR00237 GPCR IPR000725 173 189 PR00245 Olfactory receptor IPR000276 196 219 PR00237 GPCR IPR000725 233 242 PR00245 Olfactory receptor IPR000276 269 295 PR00237 GPCR IPR000725 280 291 PR00245 Olfactory receptor HMMPfam IPR000276 38 287 PF00001 GPCR ProfileScan IPR017452 38 287 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 19 DLQIVIFLFLFITYILSVTGNLT 41 SECONDARY 23 2 93 NCAAQLFFFIFMGVTEFYILTAM 115 SECONDARY 23 3 139 TLLVLCAWLSGFLTIFPPLMLLL 161 PRIMARY 23 4 199 FALVTLLFTLALVILSYMYIIRT 221 PRIMARY 23 5 237 TCSSHMIVISISYGSCIFMYAN 258 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_036492 312 603232 44.3 98.4 XP_011520809 312 603232 44.3 98.4 XP_011520808 322 603232 44.3 98.4 NP_006628 314 608496 42.7 98.1 NP_835462 317 608493 41.6 99.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7446 Download

>KIBB7446  933 bp
ATGAACCACACAATGGTCACAGAGTTTGTCCTCCTGGGCCTTTCTGATGATCCTGACCTT
CAGATTGTGATTTTTCTCTTTTTATTTATCACGTATATATTAAGTGTTACTGGAAACCTG
ACTATCATCACCCTAACCTTTGTGGACTCCCATCTGCAGACACCTATGTATTTCTTCCTC
CGGAACTTCTCTTTCTTAGAAATCTCATTTACAACCGTATGCATCCCCAGATTTCTGGGG
GCAATTATCACCAGGAATAAGACTATTTCCTATAACAACTGTGCAGCCCAACTCTTTTTC
TTTATCTTCATGGGGGTGACTGAATTTTACATTTTAACTGCCATGTCCTATGACCGCTAT
GTTGCCATCTGCAAGCCCCTTCATTACACATCCATCATGAACAGGAAACTCTGCACTCTA
CTTGTGCTGTGTGCCTGGCTAAGTGGGTTTCTGACCATTTTCCCACCCCTTATGCTTCTC
CTCCAGCTGGATTACTGTGCTTCCAACGTCATTGATCACTTTGCATGTGACTATTTTCCC
CTCTTACAACTATCTTGTTCAGATACATGGCTCCTAGAAGTAATTGGTTTTTACTTTGCT
TTGGTTACTTTGCTGTTCACTTTGGCATTAGTGATTTTATCTTACATGTACATTATCAGG
ACCATTTTGAGAATCCCGTCTGCCAGTCAAAGAAAAAAGGCTTTCTCCACTTGTTCTTCT
CACATGATTGTCATTTCCATTTCTTATGGAAGCTGTATATTCATGTATGCTAATCCATCT
GCAAAAGAAAAGGCATCATTGACAAAAGGAATAGCTATTCTCAATACATCTGTTGCCCCC
ATGCTGAACCCCTTCATTTACACTCTGAGAAACCAGCAAGTAAAACAAGCCTTCAAAAAT
GTGGTCCACAAAGTTGTGTTTTATGCAAATCAA

ORF Protein

Cloned ORF protein sequence for pFN21AB7446 Download

>KIBB7446  311 aa
MNHTMVTEFVLLGLSDDPDLQIVIFLFLFITYILSVTGNLTIITLTFVDSHLQTPMYFFL
RNFSFLEISFTTVCIPRFLGAIITRNKTISYNNCAAQLFFFIFMGVTEFYILTAMSYDRY
VAICKPLHYTSIMNRKLCTLLVLCAWLSGFLTIFPPLMLLLQLDYCASNVIDHFACDYFP
LLQLSCSDTWLLEVIGFYFALVTLLFTLALVILSYMYIIRTILRIPSASQRKKAFSTCSS
HMIVISISYGSCIFMYANPSAKEKASLTKGIAILNTSVAPMLNPFIYTLRNQQVKQAFKN
VVHKVVFYANQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7446 Download

>pFN21AB7446  5638 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAACCACACAATGGTCACAGAGTTTGTCCTCCT
GGGCCTTTCTGATGATCCTGACCTTCAGATTGTGATTTTTCTCTTTTTATTTATCACGTA
TATATTAAGTGTTACTGGAAACCTGACTATCATCACCCTAACCTTTGTGGACTCCCATCT
GCAGACACCTATGTATTTCTTCCTCCGGAACTTCTCTTTCTTAGAAATCTCATTTACAAC
CGTATGCATCCCCAGATTTCTGGGGGCAATTATCACCAGGAATAAGACTATTTCCTATAA
CAACTGTGCAGCCCAACTCTTTTTCTTTATCTTCATGGGGGTGACTGAATTTTACATTTT
AACTGCCATGTCCTATGACCGCTATGTTGCCATCTGCAAGCCCCTTCATTACACATCCAT
CATGAACAGGAAACTCTGCACTCTACTTGTGCTGTGTGCCTGGCTAAGTGGGTTTCTGAC
CATTTTCCCACCCCTTATGCTTCTCCTCCAGCTGGATTACTGTGCTTCCAACGTCATTGA
TCACTTTGCATGTGACTATTTTCCCCTCTTACAACTATCTTGTTCAGATACATGGCTCCT
AGAAGTAATTGGTTTTTACTTTGCTTTGGTTACTTTGCTGTTCACTTTGGCATTAGTGAT
TTTATCTTACATGTACATTATCAGGACCATTTTGAGAATCCCGTCTGCCAGTCAAAGAAA
AAAGGCTTTCTCCACTTGTTCTTCTCACATGATTGTCATTTCCATTTCTTATGGAAGCTG
TATATTCATGTATGCTAATCCATCTGCAAAAGAAAAGGCATCATTGACAAAAGGAATAGC
TATTCTCAATACATCTGTTGCCCCCATGCTGAACCCCTTCATTTACACTCTGAGAAACCA
GCAAGTAAAACAAGCCTTCAAAAATGTGGTCCACAAAGTTGTGTTTTATGCAAATCAAGT
TTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAG
CTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGC
AATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGAT
GAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT
GATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAAT
TGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAA
AACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCC
CTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTG
GCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGA
ACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAA
CCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGT
GTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG
CTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTG
GATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATG
AGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAG
CAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACA
GAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATG
AGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTG
AATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACG
TTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGAC
TGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGG
TTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTG
GGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACT
ATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
TTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATAC
GGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAA
AGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAA
GATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGC
TTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCAC
GCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAAC
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG
TAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGT
ATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGA
CAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCT
CTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGA
TTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACG
CTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCT
TCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTG
GGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTG
TACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGT
TTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTT
TTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCC
ATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT