TRIM9 ORF clone FHC00493

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC00493

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Clone info.

Species

human

Clone Name

pFN21ASDA0282 Sequence (with vector) Restriction Map

Product ID

FHC00493

Flexi Clone PID

FXC00493

ORF Sequence

DNA sequence (1992 bp)
Protein sequence (664 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383836]

Gene

KIAA0282

Symbol

TRIM9

Alias : RNF91, SPRING

Description

tripartite motif containing 9

Original Clone ID

ha06845s1

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1992 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 664 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9703.1 2e-187 99.8 TRIM9 CCDS45105.1 1.7e-150 100.0 TRIM9 CCDS73048.1 2.8e-96 66.6 TRIM67 CCDS44333.1 3.1e-95 62.4 TRIM67 CCDS75287.1 4.1e-20 25.9 TRIM36 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 10 40 PF00097 Zinc finger IPR000315 226 265 PF00643 Zinc finger IPR003961 454 525 PF00041 Fibronectin IPR003877 576 661 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 10 131 SM00184 Zinc finger IPR000315 163 212 SM00336 Zinc finger IPR000315 224 266 SM00336 Zinc finger IPR003649 273 399 SM00502 B-box IPR003961 439 522 SM00060 Fibronectin ProfileScan IPR001841 10 47 PS50089 Zinc finger IPR000315 163 212 PS50119 Zinc finger IPR000315 224 266 PS50119 Zinc finger IPR017903 374 432 PS51262 COS domain IPR003961 439 532 PS50853 Fibronectin IPR001870 517 664 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055978 710 606555 99.8 99.5 XP_016876434 710 606555 99.8 99.5 XP_016876435 706 606555 99.2 99.5 XP_016876436 692 606555 97.0 99.5 XP_016876437 688 606555 96.4 99.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA0282 Download

>KIAA0282  1992 bp
ATGGAGGAGATGGAAGAGGAGTTGAAATGCCCCGTGTGCGGCTCCTTCTATCGGGAGCCC
ATCATCCTGCCCTGCTCTCACAATTTGTGTCAGGCGTGCGCCCGCAACATCCTGGTGCAG
ACCCCAGAGTCTGAATCCCCCCAGAGCCATCGGGCCGCGGGCTCCGGGGTCTCCGACTAT
GACTATCTGGACCTGGACAAGATGAGCCTATACAGCGAGGCGGACAGCGGCTATGGCTCC
TACGGGGGGTTCGCCAGCGCCCCCACTACCCCGTGCCAGAAGTCCCCCAACGGCGTCCGC
GTGTTTCCCCCGGCTATGCCGCCACCGGCCACCCACTTGTCACCGGCCCTGGCCCCGGTG
CCCCGCAACTCCTGTATCACCTGCCCCCAGTGTCACCGCAGCCTCATCCTGGATGACCGG
GGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGGAAGGGGTAATTGACCGCTACCAGCAG
AGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCGAGAAGGCGCCCAAGGAAGCCACCGTC
ATGTGCGAACAGTGCGATGTCTTCTACTGCGATCCGTGCCGCCTGCGCTGCCACCCGCCC
CGGGGGCCCCTAGCCAAGCACCGCCTGGTGCCCCCGGCCCAGGGTCGTGTGAGCCGGAGG
CTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTAC
TGCGTGCAATGCAAGATGCCCGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGC
CACGAAGTCAAGGCTCTGGGGGCCATGTGGAAACTACATAAGAGCCAGCTCTCCCAGGCG
CTGAACGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGTTTCTGGTACAGCTGCGCAAC
ATGGTCCAGCAGATCCAGGAGAACAGTGTGGAGTTTGAAGCCTGTCTGGTGGCCCAATGT
GATGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAAG
GAGCATGAGCACAAGCTGAAGGTGGTTCGAGATCAGATCTCTCACTGCACAGTGAAATTG
CGCCAGACCACAGGTCTCATGGAGTACTGCTTGGAGGTGATTAAGGAAAATGATCCTAGT
GGTTTTTTGCAGATTTCTGACGCCCTCATAAGAAGAGTGCACCTGACTGAGGATCAGTGG
GGTAAAGGCACACTCACTCCAAGGATGACCACGGACTTTGACTTGAGTCTGGACAACAGC
CCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCTCCAGTC
CCAGCAACCCCTATCCTACAGCTGGAGGAATGTTGTACCCACAACAACAGCGCTACGTTG
TCCTGGAAACAGCCACCTCTGTCCACGGTGCCCGCCGATGGATACATTCTGGAGCTGGAT
GATGGCAACGGTGGTCAATTCCGGGAGGTGTATGTGGGGAAGGAGACAATGTGCACTGTG
GATGGTCTTCACTTCAACAGCACATACAACGCTCGGGTCAAGGCCTTCAACAAAACAGGA
GTCAGCCCGTACAGCAAGACCCTGGTCCTCCAAACGTCTGAGGTGGCCTGGTTTGCTTTC
GACCCTGGCTCGGCGCACTCGGACATCATCCTCTCCAATGACAACCTGACAGTGACCTGT
AGTAGCTATGATGACCGGGTGGTGCTAGGGAAGACTGGCTTCTCCAAGGGCATCCACTAC
TGGGAGCTCACGGTAGATCGCTATGACAACCACCCTGATCCTGCCTTTGGTGTGGCTCGC
ATGGACGTGATGAAGGATGTGATGTTAGGAAAAGACGACAAAGCTTGGGCAATGTATGTG
GACAATAACCGGAGCTGGTTCATGCACAACAACTCGCACACCAACAGAACTGAGGGAGGG
ATCACAAAAGGGGCCACAATTGGGGTCCTCCTCGACTTCAATAGAAAAAACTTGACATTT
TTTTATCAACGA

ORF Protein

Cloned ORF protein sequence for pFN21ASDA0282 Download

>KIAA0282  664 aa
MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY
DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV
PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV
MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY
CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN
MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL
RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS
PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD
DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEVAWFAF
DPGSAHSDIILSNDNLTVTCSSYDDRVVLGKTGFSKGIHYWELTVDRYDNHPDPAFGVAR
MDVMKDVMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDFNRKNLTF
FYQR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA0282 Download

>pFN21ASDA0282  6721 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGAGGAGATGGAAGA
GGAGTTGAAATGCCCCGTGTGCGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTC
TCACAATTTGTGTCAGGCGTGCGCCCGCAACATCCTGGTGCAGACCCCAGAGTCTGAATC
CCCCCAGAGCCATCGGGCCGCGGGCTCCGGGGTCTCCGACTATGACTATCTGGACCTGGA
CAAGATGAGCCTATACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGGGGGTTCGCCAG
CGCCCCCACTACCCCGTGCCAGAAGTCCCCCAACGGCGTCCGCGTGTTTCCCCCGGCTAT
GCCGCCACCGGCCACCCACTTGTCACCGGCCCTGGCCCCGGTGCCCCGCAACTCCTGTAT
CACCTGCCCCCAGTGTCACCGCAGCCTCATCCTGGATGACCGGGGGCTCCGCGGCTTCCC
CAAGAATCGCGTACTGGAAGGGGTAATTGACCGCTACCAGCAGAGCAAAGCCGCGGCCCT
CAAGTGCCAGCTCTGCGAGAAGGCGCCCAAGGAAGCCACCGTCATGTGCGAACAGTGCGA
TGTCTTCTACTGCGATCCGTGCCGCCTGCGCTGCCACCCGCCCCGGGGGCCCCTAGCCAA
GCACCGCCTGGTGCCCCCGGCCCAGGGTCGTGTGAGCCGGAGGCTGAGCCCACGCAAGGT
CTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACTGCGTGCAATGCAAGAT
GCCCGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGAAGTCAAGGCTCT
GGGGGCCATGTGGAAACTACATAAGAGCCAGCTCTCCCAGGCGCTGAACGGACTGTCAGA
CAGGGCCAAAGAAGCCAAGGAGTTTCTGGTACAGCTGCGCAACATGGTCCAGCAGATCCA
GGAGAACAGTGTGGAGTTTGAAGCCTGTCTGGTGGCCCAATGTGATGCCCTCATCGATGC
CCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAAGGAGCATGAGCACAAGCT
GAAGGTGGTTCGAGATCAGATCTCTCACTGCACAGTGAAATTGCGCCAGACCACAGGTCT
CATGGAGTACTGCTTGGAGGTGATTAAGGAAAATGATCCTAGTGGTTTTTTGCAGATTTC
TGACGCCCTCATAAGAAGAGTGCACCTGACTGAGGATCAGTGGGGTAAAGGCACACTCAC
TCCAAGGATGACCACGGACTTTGACTTGAGTCTGGACAACAGCCCTCTGCTGCAATCCAT
CCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCTATCCT
ACAGCTGGAGGAATGTTGTACCCACAACAACAGCGCTACGTTGTCCTGGAAACAGCCACC
TCTGTCCACGGTGCCCGCCGATGGATACATTCTGGAGCTGGATGATGGCAACGGTGGTCA
ATTCCGGGAGGTGTATGTGGGGAAGGAGACAATGTGCACTGTGGATGGTCTTCACTTCAA
CAGCACATACAACGCTCGGGTCAAGGCCTTCAACAAAACAGGAGTCAGCCCGTACAGCAA
GACCCTGGTCCTCCAAACGTCTGAGGTGGCCTGGTTTGCTTTCGACCCTGGCTCGGCGCA
CTCGGACATCATCCTCTCCAATGACAACCTGACAGTGACCTGTAGTAGCTATGATGACCG
GGTGGTGCTAGGGAAGACTGGCTTCTCCAAGGGCATCCACTACTGGGAGCTCACGGTAGA
TCGCTATGACAACCACCCTGATCCTGCCTTTGGTGTGGCTCGCATGGACGTGATGAAGGA
TGTGATGTTAGGAAAAGACGACAAAGCTTGGGCAATGTATGTGGACAATAACCGGAGCTG
GTTCATGCACAACAACTCGCACACCAACAGAACTGAGGGAGGGATCACAAAAGGGGCCAC
AATTGGGGTCCTCCTCGACTTCAATAGAAAAAACTTGACATTTTTTTATCAACGATACGT
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T