GENSCAN 1.0	Date run: 27-Feb-117	Time: 10:33:14

Sequence gi568815596f:42145504_42430204 : 284701 bp : 40.28% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    640    635    6                               1.05
 1.02 Term -   2337   2180  158  1  2   40   42   160 0.291   3.71
 1.01 Init -  15468  15222  247  0  1  114   49   168 0.730  13.30
 1.00 Prom -  19121  19082   40                              -5.85

 2.00 Prom +  19698  19737   40                              -8.85
 2.01 Init +  24109  24133   25  0  1   90  109    27 0.594   4.81
 2.02 Term +  24337  24881  545  2  2   91   37   156 0.606   4.24
 2.03 PlyA +  28344  28349    6                               1.05

 3.03 PlyA -  28389  28384    6                               1.05
 3.02 Term -  37059  36937  123  0  0   92   54   116 0.951   6.00
 3.01 Init -  43429  43367   63  1  0   65   44    78 0.384   0.30
 3.00 Prom -  58112  58073   40                              -2.35

 4.00 Prom +  62271  62310   40                              -4.75
 4.01 Init +  62454  62579  126  2  0   65   87   127 0.995  10.51
 4.02 Intr +  72789  72846   58  2  1  102   47     4 0.004  -4.76
 4.03 Intr + 100002 100184  183  1  0   79   86   157 0.926  13.44
 4.04 Intr + 110998 111127  130  2  1   80   75   127 0.967   9.43
 4.05 Intr + 117675 117803  129  0  0   52  108   105 0.955   7.79
 4.06 Intr + 119203 119228   26  1  2  104   94    50 0.912   3.95
 4.07 Intr + 135347 135464  118  0  1   84  -12   105 0.169  -1.30
 4.08 Intr + 139131 139200   70  0  1   81   96    56 0.897   3.97
 4.09 Intr + 140766 140876  111  2  0  100   92    49 0.976   6.16
 4.10 Intr + 142724 142819   96  1  0   85   94    53 0.959   4.89
 4.11 Intr + 149622 149756  135  2  0   79   78    22 0.512   0.14
 4.12 Intr + 149878 150013  136  0  1   76   87    74 0.956   5.32
 4.13 Intr + 151970 152137  168  0  0   57   89    59 0.525   1.90
 4.14 Intr + 155738 155889  152  0  2   64   94    62 0.984   3.36
 4.15 Intr + 157601 157726  126  1  0   88  115    93 0.999  11.96
 4.16 Intr + 158981 159048   68  1  2  107   91    39 0.926   2.88
 4.17 Intr + 170459 170547   89  2  2   77   68    62 0.639   1.80
 4.18 Intr + 180651 180749   99  1  0   44   87    92 0.033   3.86
 4.19 Intr + 183383 183513  131  0  2   41   92    98 0.777   4.99
 4.20 Term + 184231 184704  474  0  0   56   41   483 0.997  34.30
 4.21 PlyA + 187014 187019    6                               1.05

 5.00 Prom + 187476 187515   40                              -6.85
 5.01 Init + 187898 187982   85  1  1   52   47    77 0.501   1.03
 5.02 Intr + 188107 188349  243  2  0   31   26   191 0.023   3.75
 5.03 Intr + 190917 191069  153  1  0   60   37    97 0.021   0.92
 5.04 Intr + 192290 192457  168  0  0   57  -11   219 0.005   7.90
 5.05 Intr + 195973 196096  124  2  1  115   31    68 0.003   2.52
 5.06 Intr + 196806 196910  105  0  0  123   96    28 0.057   5.51
 5.07 Intr + 198410 198545  136  2  1   47    2    96 0.181  -3.45
 5.08 Intr + 200592 200793  202  2  1  111   82   115 0.924  11.14
 5.09 Term + 202822 202961  140  2  2   50   42   108 0.347  -0.46
 5.10 PlyA + 204115 204120    6                               1.05

 6.07 PlyA - 204233 204228    6                               1.05
 6.06 Term - 205856 205716  141  2  0   72   44   193 0.998  10.25
 6.05 Intr - 207840 207709  132  0  0  126   94    97 0.997  14.02
 6.04 Intr - 215769 215587  183  0  0  -18   96   160 0.041   5.26
 6.03 Intr - 223642 223365  278  2  2   80  111    69 0.119   4.71
 6.02 Intr - 239443 239359   85  1  1   60   80    99 0.008   4.77
 6.01 Init - 253492 253430   63  1  0   51   72    77 0.134   3.60
 6.00 Prom - 253741 253702   40                              -3.25

 7.00 Prom + 255608 255647   40                              -6.85
 7.01 Init + 262087 262536  450  0  0   74   69   270 0.575  17.66
 7.02 Intr + 263493 263685  193  2  1   25   89    97 0.610   1.64
 7.03 Term + 266440 266654  215  2  2   21   44   163 0.635   1.61
 7.04 PlyA + 270719 270724    6                               1.05

 8.03 PlyA - 273026 273021    6                               1.05
 8.02 Term - 279670 279430  241  0  1   86   55   194 0.917  10.41
 8.01 Init - 283888 283860   29  1  2   95   96    20 0.821   2.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_1|134_aa
MPSHGGIFASAHEVSHDPGPESPSCEMGCPYPKVRKDSRGRAQVPPRAKIVGEASFCYCQ
QLLVSVIQYPACNQAYQVGQTAGCLLPCIVSLLSGPAWHRSTVERPDPGPLEERAGIIAE
ELSQCWLAVVRSSP

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_1|405_bp
atgcccagccatggtggcatttttgcatcagcccatgaggtgagccatgacccaggtcca
gagagtccttcatgtgaaatgggctgtccttacccaaaagtgagaaaagattcccgtgga
agagcccaagttcctcccagggccaaaattgtgggggaagcatctttctgttattgccag
cagttgctggtctcagttatccagtatcctgcatgcaaccaggcttatcaagttggccag
accgcaggctgtctgctgccctgcattgtgagtttgctcagtgggccagcgtggcacaga
agcacagttgagagaccagacccggggcctctggaggaacgtgctggtatcatcgctgaa
gagctttctcaatgctggctggctgttgtcaggagcagtccttag

>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_2|189_aa
MDGFAGSLDPPFLPEPLSVRGPRSPKVGTPSFSGPPIAGTPLPVHSRLPPLTPLQSWDIS
SNPGSSSGYNLPPPFHIHASLSGWGSPSPEQRLLFRGGTLIPSSGRGHPPPPSLHFRFEG
DFPVSFRVVGNFLFNPSTSLSILQWWRDLEASEHHLLNAGKEEVHLCWGTLFKSESRSVF
WFCIHAGEK

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_2|570_bp
atggacggtttcgccggcagtctcgaccctcctttcctcccggagcccctttcagtgcgg
ggccctcgttcccccaaagtgggaaccccttccttctcaggccccccgatagctggcaca
cccctccccgtacactcacggctccctccacttaccccccttcagagttgggacatttct
tcaaatccaggctcctcttcagggtacaaccttccaccacctttccacatacacgcctct
ctttcagggtggggatcgccttcacccgaacagaggctcctttttaggggagggaccctc
attccctcttcaggaagggggcatcccccgcccccaagtcttcactttagatttgaaggc
gactttccagtatccttcagagtagtaggcaacttccttttcaatccctccacttctctg
agcattttgcagtggtggagagacctagaagcatcggagcatcatttgcttaatgcagga
aaggaagaggtgcatctgtgttgggggaccctctttaagagtgaaagcagaagtgttttc
tggttctgcatacatgctggggagaagtga

>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_3|61_aa
MLPTWAQAILLPWTPKALGLQFSPKAIKAASARQVCKEVILAEEQHSTGCQFSAGYQQPG
G

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_3|186_bp
atgctgcctacctgggctcaagcgatcctcctgccttggactcccaaagcgctgggatta
cagttcagtcctaaagctatcaaggcagccagtgcaaggcaagtgtgtaaggaggtcatt
ctggcagaggagcagcacagtacggggtgtcagtttagtgcagggtatcaacaaccaggt
ggatga

>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_4|874_aa
MAVFGYEYATVLTLSESRTSVCESVLRDSSSHFQFHLFFGGQMGPSSCRKTSSGLPLILH
YNDSISAASTSDVQDRLSALESRVQQQEDEITVLKAALADVLRRLAISEDHVASVKKSVS
SKGQPSPRAVIPMSCITNGSGANRKPSHTSAVSIAGKETLSSAAKSIKRPSPAEKSHNSW
ENSDDSRNKLSKIPSTPKLIPKVTKTADKHKDVIINQEGEYIKMFMRGRPITMFIPSDVD
NYDDIRTELPPEKLKLDLAIHPDKIRIATGQIAGVDKDGRPLQPHVRVWDSVTLSTLQII
GLGTFERGVGCLDFSKADSGVHLCIIDDSNEHMLTVWDWQKKAKGAEIKTTNEVVLAVEF
HPTDANTIITCGKSHIFFWTWSGNSLTRKQGIFGKYEKPKFVQCLAFLGNGDVLTGDSGG
VMLIWSKTTVEPTPGKGPKGNRKSNLVNCWAHEMACVVLCHMTNPIMGKVAKNLRFSIGW
EEFGERSEINGSPDQSVYQISKQIKAHDGSVFTLCQMRNGMLLTGGGKDRKIILWDHDLN
PEREIEVPDQYGTIRAVAEGKADQFLVGTSRNFILRGTFNDGFQIEVQEPGHCADFHPSG
TVVAIGTHSGRWFVLDAETRDLVSIHTDGNEQLSVMRYSIGDIPNGCKLIRNRSDCKDID
WTTYTCVLGFQVFGVWPEGSDGTDINALVRSHNRKVIAVADDFCKVHLFQYPCSKAKAPS
HKYSAHSSHVTNVSFTHNDSHLISTGGKDMSIIQWKLVEKLSLPQNETVADTTLTKAPVS
STESVIQSNTPTPPPSQPLNETAEEESRISSSPTLLENSLEQTVEPSEDHSEEESEEGSG
DLGEPLYEEPCNEISKEQAKATLLEDQQDPSPSS

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_4|2625_bp
atggcagtatttggatatgagtatgctacagtattgacactttctgaaagtcggacatca
gtatgcgagagcgtacttcgtgatagcagctcacactttcaatttcacctcttctttggt
ggacagatgggaccatctagttgcaggaaaacaagctcagggctcccactgattctacat
tataatgatagtatttctgctgcaagtacttctgatgttcaagatcgcctgtcagctctt
gagtcacgagttcagcaacaagaagatgaaatcactgtgctaaaggcggctttggctgat
gttttgaggcgtcttgcaatctctgaagatcatgtggcctcagtgaaaaaatcagtctca
agtaaaggccaaccaagccctcgagcagttattcccatgtcctgtataaccaatggaagt
ggtgcaaacagaaaaccaagtcataccagtgctgtctcaattgcaggaaaagaaactctt
tcatctgctgctaaaagcataaaacgaccatcaccagctgaaaagtcacataattcttgg
gaaaattcagatgatagccgtaataaattgtcgaaaataccttcaacacccaaattaata
ccaaaagttaccaaaactgcagacaagcataaagatgtcatcatcaaccaagaaggagaa
tatattaaaatgtttatgcgcggtcggccaattaccatgttcattccttccgatgttgac
aactatgatgacatcagaacggaactgcctcctgagaagctcaaactggaccttgctata
catcctgacaaaattaggattgcaactggacagatagctggcgtggataaagatggaagg
cctctacaaccccacgtcagagtgtgggattctgttactctatccacactgcagattatt
ggacttggcacttttgagcgtggagtaggatgcctggatttttcaaaagcagattcaggt
gttcatttatgtattattgatgactccaatgagcatatgcttactgtatgggactggcag
aagaaagcaaaaggagcagaaataaagacaacaaatgaagttgttttggctgtggagttt
cacccaacagatgcaaataccataattacatgcggtaaatctcatattttcttctggacc
tggagcggcaattcactaacaagaaaacagggaatttttgggaaatatgaaaagccaaaa
tttgtgcagtgtttagcattcttggggaatggagatgttcttactggagactcaggtgga
gtcatgcttatatggagcaaaactactgtagagcccacacctgggaaaggacctaaagga
aacaggaaatccaatcttgtaaattgctgggcacatgaaatggcctgtgttgtactttgc
cacatgactaaccctattatgggcaaagttgctaagaatttgaggttttcaattggctgg
gaagaatttggtgagcgcagtgaaataaatggaagtccagaccagagtgtatatcaaatc
agcaaacaaatcaaagctcatgatggcagtgtgttcacactttgtcagatgagaaatggg
atgttattaactggaggagggaaagacagaaaaataattctgtgggatcatgatctgaat
cctgaaagagaaatagaggttcctgatcagtatggcacaatcagagctgtagcagaagga
aaggcagatcaatttttagtaggcacatcacgaaactttattttacgaggaacatttaat
gatggcttccaaatagaagtacaggaaccaggacactgtgcagattttcatccaagtggc
acagtggtggccataggaacgcactcaggcaggtggtttgttctggatgcagaaaccaga
gatctagtttctatccacacagacgggaatgaacagctctctgtgatgcgctactcaata
ggggacattccaaatggctgcaaactaatcaggaatcgatcggattgtaaggacattgat
tggacgacatatacctgtgtgctaggatttcaagtatttggtgtctggccagaaggatct
gatgggacagatatcaatgcactggtgcgatcccacaatagaaaggtgatagctgttgcc
gatgacttttgtaaagtccatctgtttcagtatccctgctccaaagcaaaggctcccagt
cacaagtacagtgcccacagcagccatgtcaccaatgtcagttttactcacaatgacagt
cacctgatatcaactggtggaaaagacatgagcatcattcagtggaaacttgtggaaaag
ttatctttgcctcagaatgagactgtagcggatactactctaaccaaagcccccgtctct
tccactgaaagtgtcatccaatctaatactcccacaccgcctccttctcagcccttaaat
gagacagctgaagaggaaagtagaataagcagttctcccacacttctggagaacagcctg
gaacaaactgtggagccaagtgaagaccacagcgaggaggagagtgaagagggcagcgga
gaccttggtgagcctctttatgaagagccatgcaacgagataagcaaggagcaggccaaa
gccacccttctggaggaccagcaagacccttcgccctcgtcctaa

>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_5|451_aa
MDQEELPLEEYLLWAQHLPIPRCSGIQGGERHSLDIEGKDQGRFTDLLWKGDKGNRRESV
SVLVLSLGRGESTTQQCRTSVSPSLKPCWKSPFVQDAHDWSLQQPQKQNDLIEGTEKKVS
ARRKGLREEKEFLNMQSLQPGHPISCLTDHSNQALVPPRKGNMEKKMSLTTTKPFETLPA
RVHLQCSTDQSEEAVRTVGPSGAHWLSSARSATMGPSMGLLFASHVVQSSQQCSPSPPAA
VGAHILQLKEQVLTQSDGRAETRDLSSLLGKMPSETTPISAPTYSLALQAGTSFTAKSHW
MKGPRRRAKASQTLKGNLADRKSKARDKWALLYKDKCKPGTKQLTGPVEDTSPKWDNNIL
SLLELRACCQQLDNNFLPNPMRNRESWSAETELNSCIIKRVTERTGYLLTAKGKGYQLDK
GEIRQTQLQITNNGTNWYQVPPDITRTPYHL

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_5|1356_bp
atggaccaagaagagctgcccctggaggagtacctactgtgggcccaacatctcccaata
cccaggtgttcagggatacagggaggagaaagacattcattagacatagaaggaaaggac
cagggtagattcacagacttactttggaaaggagataagggaaacagaagagagtctgtg
tcagtcttggtcctcagtctgggacgaggtgagtccacgacacagcagtgccgcacatct
gtatcaccatcactgaagccctgctggaaaagtccctttgtccaagatgcccacgactgg
agtctccagcagccacagaaacagaatgatctcattgaaggcactgagaagaaagtgagt
gcccgaagaaagggcctcagggaggaaaaggaatttcttaatatgcaaagccttcagcct
ggtcatcccatctcatgcttgactgatcacagtaaccaagcccttgtgcctcctaggaaa
gggaatatggagaagaaaatgagccttactaccacgaagccttttgaaactctccctgca
cgtgtgcacctgcagtgctccactgaccagtcagaggaggcagtgcggaccgtgggacca
agcggtgcccactggctttctagcgcccgctctgctaccatgggtccctccatgggattg
ctttttgcaagtcatgtggttcaatctagccagcagtgctcccccagccctcctgctgcc
gtgggcgcccacatccttcagctcaaagaacaggtcctgactcagagtgatgggagagct
gagacgagggacttgagctctctgcttggcaagatgccctcagaaaccaccccaatttct
gcacccacttattccttggcccttcaggcaggcaccagcttcacagcaaagtcacactgg
atgaaggggccgagaaggagagcgaaagctagtcagaccctgaaagggaatctggctgac
agaaagagcaaagccagggataagtgggcactgctttacaaggacaagtgtaaacctggc
accaaacagctgactggcccagtggaggacacctcacccaaatgggacaataacattctc
tctctcctggaattaagggcatgttgccagcagctggacaacaatttccttccaaatcca
atgagaaacagagaaagctggtctgcagagacagaattaaacagctgcataatcaagaga
gtgacagaaaggacaggctacttattaactgcaaaggggaaagggtatcaacttgacaag
ggagaaatccggcagacacaacttcaaatcaccaataatgggacaaactggtatcaagtg
ccacctgacataacgaggacaccatatcacctataa

>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_6|293_aa
MNRQFTKDEPYKAMNIEKMLRLPCSSNSLADDHSPETGKAGTLQSWGKAAASRCPKQEDI
TVIGHREHGWGVCQAGQCREAKNSGRKHNKVRPAQNGKHSSRATTHFPSGSGGESSQGGR
EMDGNCWGCEKPGALTGVVIDLSQHRVLALSLGTTAGEAGSFSGAVALAADAGSRTLGVM
YYKFSGFTQKLAGAWASEAYSPQGLKPVVSTEAPPIIFATPTKLTSDSTVYDYAGKNKVP
ELQKFFQKADGVPVYLKRGLPDQMLYRTTMALTVGGTIYCLIALYMASQPKNK

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_6|882_bp
atgaacaggcagttcacaaaagatgagccttacaaggcaatgaacattgaaaagatgctg
aggcttccttgcagcagcaacagccttgctgacgaccacagtccagaaactggcaaggct
ggcaccttgcagagctgggggaaggcagcagcaagcagatgcccaaaacaggaggacatc
acggtgataggccacagagaacatggctggggcgtgtgccaggcaggacaatgcagggaa
gccaaaaacagtgggagaaaacacaataaagtgagacccgcccagaatggtaaacacagc
agcagagctaccacacacttcccttctgggagcggtggggaaagcagccagggaggtcgg
gagatggacggaaactgctggggatgtgagaagcctggggcactaactggagttgttatt
gacttgtcccagcaccgggtccttgcgctgagtctcgggaccacagccggggaggcgggg
tccttctctggggcggtcgcgttggcagcggatgcgggaagccggactctgggcgtcatg
tactacaagtttagtggcttcacgcagaagttggcaggagcatgggcttcggaggcctat
agcccgcagggattaaagcctgtggtttccacagaagcaccacctatcatatttgccaca
ccaactaaactgacctccgattccacagtgtatgattatgctgggaaaaacaaagttcca
gagctacaaaagtttttccagaaagctgatggtgtgcccgtctacctgaaacgaggcctg
cctgaccaaatgctttaccggaccaccatggcgctgactgtgggagggaccatctactgc
ctgatcgccctctacatggcttcgcagcccaaaaacaaatga

>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_7|285_aa
MAVDPGLLLLQGAPLGGQLQLPKSQLQTRASLCSCRCQEQAGALPSLVQLQTRASLCSCR
CQKQAGALPSLVQLQTRASMQQAGTPSPPTLGQLQPPKPWLWTKASLHSWGPRKPHLTLQ
ARKCLLPLPDFSLLLVPTPISEQSWGEDSQPHREPVPVLAPGAAHPTAAASMSDCVQWPD
PTLTHTPLAIPCLTCPWWCGIQAGSKNQMQPARPTNSRYDLALMNQIHTYIQEQEDGKDV
EPLVLLLWWLASQVELTTPGLNIPVSSHYLCGHEKIVVAAAVTAS

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_7|858_bp
atggctgtggacccaggcctcctgctcctccagggagccccgcttggggggcagctgcag
ctgcccaaatcacagctgcagacccgggcctccctgtgctcttgcaggtgccaagagcaa
gcaggagccctgccctccctggtgcagcttcagacccgggcctccctgtgctcttgcagg
tgccaaaagcaagcaggagccctgccctccctggtgcagcttcagacccgggcctccatg
cagcaggcaggaaccccatccccgccaactctggggcagctgcagccacccaaaccgtgg
ctgtggaccaaggcatccctacactcttgggggcccagaaagccccacctgaccttgcag
gctcggaaatgcctgctcccactgcctgacttctccctgctgttggtgcccacgccgatc
tcagaacaaagctggggtgaagacagccagcctcacagagagccagtgcctgtgctggca
cctggagctgcccaccccactgcagcagccagcatgtctgactgtgtgcagtggccagac
cccacactcactcacacaccccttgccattccatgtctgacttgcccttggtggtgtggg
atccaggctggcagcaagaaccaaatgcagcctgccaggccaacaaattctagatatgat
ttagctttgatgaatcaaatacatacatacatacaagagcaggaagatggaaaagacgtg
gagccccttgtcctcctgctgtggtggctggcaagccaggttgaactgactacccctgga
ctcaatattccagtgtctagtcactacctttgtggacatgagaagattgtggtggcagca
gcagtgacagcttcctga

>gi568815596f:42145504_42430204|GENSCAN_predicted_peptide_8|89_aa
MADLWQSLEGGPPVEQLPPDPLTRWCFHPAGSTLCGPANSMAVASPGSRPAAPGGGFLRT
EALVLIVAAGPVDGLNCENHPFRGGCKDF

>gi568815596f:42145504_42430204|GENSCAN_predicted_CDS_8|270_bp
atggctgatttgtggcagtctctagaaggtggcccaccggtggagcagctgcccccagac
cccttgacccggtggtgcttccaccctgccggaagcaccttgtgtggccccgccaacagc
atggcggttgcatccccaggaagcaggcccgcagcgccaggagggggtttcctgaggaca
gaggcccttgtcctgattgtcgcagcaggccctgtcgatggacttaactgtgaaaatcac
cctttcaggggtggatgcaaggacttctga