GENSCAN 1.0	Date run:  8-Nov-116	Time: 16:04:26

Sequence gi568815592r:136901561_137117106 : 215546 bp : 41.13% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10127  10291  165  1  0   47   91    57 0.459   1.58
 1.02 Term +  11898  11966   69  2  0  124   50    71 0.832   3.86
 1.03 PlyA +  12023  12028    6                               1.05

 2.00 Prom +  12940  12979   40                              -6.15
 2.01 Init +  20869  21307  439  0  1   92   99   474 0.983  43.22
 2.02 Intr +  22325  22927  603  0  0   90   81   862 0.021  77.22
 2.03 Term +  32128  32414  287  2  2   81   43   252 0.484  14.58
 2.04 PlyA +  32607  32612    6                               1.05

 3.00 Prom +  40015  40054   40                              -6.85
 3.01 Init +  42252  42354  103  2  1   49   91    78 0.729   4.65
 3.02 Term +  45628  45701   74  2  2  108   53    77 0.749   3.29
 3.03 PlyA +  46409  46414    6                               1.05

 4.06 PlyA -  47084  47079    6                               1.05
 4.05 Term -  53727  53568  160  2  1  122   49    67 0.464   2.63
 4.04 Intr -  58236  58123  114  2  0   93   75    90 0.430   6.84
 4.03 Intr -  66081  65946  136  1  1   54   78    45 0.103  -1.19
 4.02 Intr -  67560  67311  250  0  1   90   75    82 0.319   3.19
 4.01 Init -  72741  72439  303  0  0   20   86   139 0.560   4.24
 4.00 Prom -  76063  76024   40                              -6.45

 5.00 Prom +  77737  77776   40                              -5.45
 5.01 Init +  82345  82481  137  0  2   82   78   191 0.449  17.16
 5.02 Term +  84784  84862   79  1  1  142   32    16 0.336  -2.34
 5.03 PlyA +  85106  85111    6                               1.05

 6.04 PlyA -  86863  86858    6                               1.05
 6.03 Term -  87258  87134  125  1  2   90   32   104 0.512   2.57
 6.02 Intr -  88647  88498  150  1  0   22   55   155 0.555   4.81
 6.01 Init -  91934  91904   31  2  1   78   29    71 0.325   0.15
 6.00 Prom -  97916  97877   40                              -6.35

 7.11 PlyA -  98429  98424    6                               1.05
 7.10 Term - 100795  99998  798  1  0   77   44   498 0.998  36.57
 7.09 Intr - 103200 103061  140  1  2  119   97   106 0.988  13.86
 7.08 Intr - 107183 107039  145  2  1   71  121   151 0.992  15.63
 7.07 Intr - 107932 107757  176  2  2   92  115   116 0.997  13.44
 7.06 Intr - 109892 109714  179  1  2   78  106   150 0.920  14.44
 7.05 Intr - 115543 115408  136  2  1   99  103   117 0.798  13.01
 7.04 Intr - 129551 129476   76  2  1   99  103   -32 0.010  -2.43
 7.03 Intr - 137691 137581  111  0  0   99   14    96 0.005   2.96
 7.02 Intr - 142764 142577  188  1  2   43   44   116 0.080   1.19
 7.01 Init - 143168 143081   88  2  1   62   96   280 0.973  25.05
 7.00 Prom - 143440 143401   40                              -4.55

 8.14 PlyA - 144133 144128    6                               1.05
 8.13 Term - 148102 148036   67  0  1   88   48    79 0.116   0.33
 8.12 Intr - 150733 150630  104  1  2   24   99    61 0.068  -1.15
 8.11 Intr - 160598 160455  144  2  0   82   57    66 0.374   2.46
 8.10 Intr - 162498 162377  122  1  2   96   92    34 0.726   3.89
 8.09 Intr - 163035 162954   82  0  1   55  110    80 0.411   5.19
 8.08 Intr - 165239 165002  238  1  1   97  102    55 0.899   4.49
 8.07 Intr - 168736 168455  282  0  0   61   94    92 0.628   2.71
 8.06 Intr - 169049 168864  186  1  0   89    7   108 0.225   0.68
 8.05 Intr - 190656 190498  159  2  0   79   96    46 0.162   2.68
 8.04 Intr - 190946 190803  144  1  0   65  107    35 0.118   1.58
 8.03 Intr - 194841 194758   84  2  0   67   75    64 0.007   1.02
 8.02 Intr - 201044 200942  103  0  1   38   60    90 0.003  -0.49
 8.01 Init - 212699 212639   61  2  1   66   60    99 0.603   6.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  15419  15244  176  0  2   85   43   138 0.831   5.94
S.002 Init -  20558  20549   10  2  1   53   64    22 0.810  -4.32
S.003 Term +  22325  23136  812  0  2   90   54   919 0.970  81.05
S.004 Term - 142764 142556  209  1  2   43   42   154 0.809   2.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_1|77_aa
MNHFAQPCFRFFAIVNEVAMNIRVYIVLQTYVFIFLGQISGSGITGSKDRYVFNLVADCS
WDETIKIYDPACLTIPA

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_1|234_bp
atgaaccactttgcccagccttgttttcgattttttgctatcgtgaatgaagttgctatg
aacattcgtgtctacattgttttgcaaacatatgttttcatttttcttggacaaatatct
gggagtggaattactgggtcaaaagataggtatgtgtttaacttggtggctgactgttct
tgggatgaaacaataaagatctatgaccctgcttgtcttactattcctgcttga

>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_2|442_aa
MRQLCRGRVLGISVAIAHGVFSGSLNILLKFLISRYQFSFLTLVQCLTSSTAALSLELLR
RLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIGV
LVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKASA
DTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAWTFPGWKDPAMVCIFVACILIGCAMN
FTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVA
KFMETRKQSNYEDLEAQPRGEEAQLSGDQLPFVMEELPGEGGNGRSEECGKVIVIKTSPL
FRPTMQNSYAEWRLTLENVTTNAKLVVCPFVTAPNPPPTNSSLHSELQIYSGTSSNGKRK
GRNMDNIRITCLKLLVDEKFWK

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_2|1329_bp
atgcggcagctgtgccggggccgcgtgctgggcatctcggtggccatcgcgcacggggtc
ttctcgggctccctcaacatcttgctcaagttcctcatcagccgctaccagttctccttc
ctgaccctggtgcagtgcctgaccagctccaccgcggcgctgagcctggagctgctgcgg
cgcctcgggctcatcgccgtgccccccttcggtctgagcctggcgcgctccttcgcgggg
gtcgcggtgctctccacgctgcagtccagcctcacgctctggtccctgcgcggcctcagc
ctgcccatgtacgtggtcttcaagcgctgcctgcccctggtcaccatgctcatcggcgtc
ctggtgctcaagaacggcgcgccctcgccaggggtgctggcggcggtgctcatcaccacc
tgcggcgccgccctggcaggagccggcgacctgacgggcgaccccatcgggtacgtcacg
ggagtgctggcggtgctggtgcacgctgcctacctggtgctcatccagaaggccagcgca
gacaccgagcacgggccgctcaccgcgcagtacgtcatcgccgtctctgccaccccgctg
ctggtcatctgctccttcgccagcaccgactccatccacgcctggaccttcccgggctgg
aaggacccggccatggtctgcatcttcgtggcctgcatcctgatcggctgcgccatgaac
ttcaccacgctgcactgcacctacatcaattcggccgtgaccaccagcttcgtgggtgtg
gtgaagagcatcgccaccatcacggtgggcatggtggccttcagcgacgtggagcccacc
tctctgttcattgccggcgtggtggtgaacaccctgggctctatcatttactgtgtggcc
aagttcatggagaccagaaagcaaagcaactacgaggacctggaggcccagcctcgggga
gaggaggcgcagctaagtggagaccagctgccgttcgtgatggaggagctgcccggggag
ggaggaaatggccggtcagaagaatgtggaaaagtcattgttattaaaacatcacccctt
ttccgtcccactatgcaaaactcatatgctgagtggagacttaccctggaaaatgttaca
accaatgcaaagttggttgtctgcccatttgtcaccgcccccaaccctccacccaccaat
tcttccttgcactcagaactccagatttattcaggtacaagcagcaatgggaagcggaag
ggaaggaacatggacaacatccgtatcacttgtttaaaactgctcgttgatgaaaagttt
tggaaatag

>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_3|58_aa
MGLRHAELATYGTKTTSIPPTRKLEFENNRVVCSVNTAINTSAAVTRPLATRCCGHRY

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_3|177_bp
atgggccttcggcatgctgagctagccacttacggtactaaaaccacctcaattcctcct
acacgtaaattagagtttgaaaataatagagttgtgtgctcagtaaacacagccattaat
acttctgctgctgtgaccaggcccctagccacccgctgctgtggccatcgctattga

>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_4|320_aa
MIRNLSESPPVTLEPVEACWEQDFLKGNTSGRLWSKSFFAGYKRSLQNQREHTALLKIEG
GYAQDETEFYLGKRCACVYKAKSNTMIPGSKPNKSRVIWGKIPLCSGHPPLDGGQLISSV
QIRGTAELAWDFFQSTCSLPEPRLTQLEHLVTFPSPGASSSCGKTTGFTDIVRFKLLAIR
KRQKVLWPQIAVLCDLHQELYLEISRLDGGSKEAQSWHSGSRGAHHSFLWRECTSKQGGD
WSARGLELASRFGTSKSKLCAGPMATSSPLYTLLPSLPILSFKRVLTTFFINASIMPYIG
DPQNRHMSYYGNHFPDPHRP

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_4|963_bp
atgatcaggaacctcagtgagtcccctcctgtcaccctggagcctgtggaggcctgctgg
gaacaggacttcttaaaaggaaatacgtctggaaggctgtggtctaagtccttttttgct
ggctataagcggagcctccagaaccaaagggagcatacagctcttcttaaaattgaaggt
ggttatgcccaagatgaaactgaattctatttgggcaagagatgtgcttgtgtatacaaa
gcaaagagcaacacaatgattcctggcagcaaaccaaacaaaagcagagtaatctgggga
aagatccctctctgctctggtcatcctcctctggacgggggccagctcatcagctcggtt
cagataaggggcacagcagagcttgcctgggacttcttccagagcacctgctcattgcca
gaaccaaggctgactcaattagaacatctggtcaccttcccgtcccctggcgcctcctca
tcctgtggcaaaaccactggcttcacagatatagttagatttaaattattagccattagg
aaaagacagaaagtattatggccacagattgctgtcctgtgtgatctccaccaagaactc
tacctggagatctccaggctggatggtggctccaaggaggcacagtcatggcatagtggc
tctaggggtgcacaccacagcttcctatggagggagtgcacgagcaaacaaggcggggac
tggagtgcacgaggcctggaactggccagccgcttcggcaccagcaagagcaagctctgt
gcgggccccatggcaacatccagccctctctacaccctactcccatccttgcccatccta
tcgttcaaaagagttcttaccacctttttcattaatgcatccatcatgccctacattggt
gatcctcaaaataggcacatgtcgtattatggaaatcacttcccagatcctcatcgtcct
tag

>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_5|71_aa
MGPGPRLVVVIMVITAAEAATVETAAIALETGEAPHEGSARICVGRSAASTLTQVHNIHP
LILSPFLRERI

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_5|216_bp
atgggacctgggcccagattggtggtagtgatcatggtgataacagcagcagaagcagca
actgtggagacagcagccatagccctggagacaggagaagctccacatgaaggcagtgct
aggatttgtgttgggagatcagctgcttccaccctgactcaagtacacaacatccaccca
ctaattctgtctccatttctgagagaaagaatctaa

>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_6|101_aa
MPFVYSEEEPRAAQQRGFPLLCSRVRNPERVSSERRPLSEWESIARAFPRARLRISAGEV
GYDSPFPDLSACRVPVGTEGCSGALRCHNLPLSTPQSQSGS

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_6|306_bp
atgccctttgtgtacagcgaagaggagccaagagctgctcagcaaaggggcttccctctg
ctctgctctcgggttcggaatccggagcgagtttccagtgagcggcgcccgctgagcgag
tgggaaagcatcgcgcgtgcctttccccgcgcgcgtctgcggatcagcgcaggcgaggtg
gggtatgacagtccttttccagacctgtcagcatgccgagtgcctgtggggacagagggc
tgctccggtgccctgaggtgccacaacttgcctctctccacaccccagagccagtcagga
agctaa

>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_7|678_aa
MRAPGRPALRPLPLPPLLLLLLAAPWGRAAYDLRSGTVTMRGPSPASPRFPPPPPRPRGG
APVDAASRPPGPAVLQAARREIRALKAKLPERNYSASYRMNSGKAVFATWRAAKEIGYPW
KAAWNRNDIISNSWQCLLLIIMAVIHIITIVIVNVPCVSGGLPKPANITFLSINMKNVLQ
WTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYAKVKAI
WGTKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQI
YSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQ
CARTLKDQSSEFKAKIIFWYVLPVSITVFLFSVMGYSIYRYIHVGKEKHPANLILIYGNE
FDKRFFVPAEKIVINFITLNISDDSKISHQDMSLLGKSSDVSSLNDPQPSGNLRPPQEEE
EVKHLGYASHLMEIFCDSEENTEGTSLTQQESLSRTIPPDKTVIEYEYDVRTTDICAGPE
EQELSLQEEVSTQGTLLESQAALAVLGPQTLQYSYTPQLQDLDPLAQEHTDSEEGPEEEP
STTLVDWDPQTGRLCIPSLSSFDQDSEGCEPSEGDGLGEEGLLSRLYEEPAPDRPPGENE
TYLMQFMEEWGLYVQMEN

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_7|2037_bp
atgcgggctcccggccgcccggccctgcggccgctgccgctgccgccgctgctgctgttg
ctcctggcggcgccttggggacgggcagcctatgacttgcggtcggggacggttaccatg
cggggcccctcgccggccagtcccaggttcccgccaccaccgccgcggccgcgcggaggg
gcccctgtggatgccgcgtctcggccgccgggccccgcagtcctgcaagccgcgcgtcgc
gagatccgcgctttaaaagccaaactccccgaaaggaactactcagcttcctatagaatg
aattcaggaaaggcagtatttgcgacctggagagcagccaaggagattggttacccatgg
aaagcggcatggaataggaacgacataataagtaattcgtggcaatgtttattactgata
ataatggcagttattcatataataacaatagttattgttaacgttccctgtgtctctggt
ggtttgcctaaacctgcaaacatcaccttcttatccatcaacatgaagaatgtcctacaa
tggactccaccagagggtcttcaaggagttaaagttacttacactgtgcagtatttcata
tatgggcaaaagaaatggctgaataaatcagaatgcagaaatatcaatagaacctactgt
gatctttctgctgaaacttctgactacgaacaccagtattatgccaaagttaaggccatt
tggggaacaaagtgttccaaatgggctgaaagtggacggttctatccttttttagaaaca
caaattggcccaccagaggtggcactgactacagatgagaagtccatttctgttgtcctg
acagctccagagaagtggaagagaaatccagaagaccttcctgtttccatgcaacaaata
tactccaatctgaagtataacgtgtctgtgttgaatactaaatcaaacagaacgtggtcc
cagtgtgtgaccaaccacacgctggtgctcacctggctggagccgaacactctttactgc
gtacacgtggagtccttcgtcccagggccccctcgccgtgctcagccttctgagaagcag
tgtgccaggactttgaaagatcaatcatcagagttcaaggctaaaatcatcttctggtat
gttttgcccgtatctattaccgtgtttcttttttctgtgatgggctattccatctaccga
tatatccacgttggcaaagagaaacacccagcaaatttgattttgatttatggaaatgaa
tttgacaaaagattctttgtgcctgctgaaaaaatcgtgattaactttatcaccctcaat
atctcggatgattctaaaatttctcatcaggatatgagtttactgggaaaaagcagtgat
gtatccagccttaatgatcctcagcccagcgggaacctgaggccccctcaggaggaagag
gaggtgaaacatttagggtatgcttcgcatttgatggaaattttttgtgactctgaagaa
aacacggaaggtacttctctcacccagcaagagtccctcagcagaacaatacccccggat
aaaacagtcattgaatatgaatatgatgtcagaaccactgacatttgtgcggggcctgaa
gagcaggagctcagtttgcaggaggaggtgtccacacaaggaacattattggagtcgcag
gcagcgttggcagtcttgggcccgcaaacgttacagtactcatacacccctcagctccaa
gacttagaccccctggcgcaggagcacacagactcggaggaggggccggaggaagagcca
tcgacgaccctggtcgactgggatccccaaactggcaggctgtgtattccttcgctgtcc
agcttcgaccaggattcagagggctgcgagccttctgagggggatgggctcggagaggag
ggtcttctatctagactctatgaggagccggctccagacaggccaccaggagaaaatgaa
acctatctcatgcaattcatggaggaatgggggttatatgtgcagatggaaaactga

>gi568815592r:136901561_137117106|GENSCAN_predicted_peptide_8|591_aa
MDSAMEYARETASDINEDLRDSCDHETHPESWLNAQISRPHPKLSDSELQDEQPRVASRF
SSDIYEEIIFSDHFIPKARADGSSPRKVQCLAKISEPPGGEAQKQTPAVWHESQCSSLHC
TGWRETGGGRRIPGSHTDMILSNIPSAATTGARGMGAHASFDLSMSPVFQLSHTHSNKQG
APKRDALPREKESKEAVWLQRLCRAVVGSAQFKLPGSFVYTVRGKPHTQASVMADTPPPT
KLEHPRGVNGSVSLAFQVPLGYEKKFLQLAWCLPKWLRSFVLETQGPSGIGTKGISWSAG
CEDHGKSVVSRLDSTIPHSTVSHGFPWLGEVVPRPLVLPRTQPTCTQVIKSFIAPNTKPV
WWSLHTDASEIWCRDSDQGTSLGKSIPCPPALCSMKKIHLRPRVLRPTSPRNISPILNRQ
LKTDTARLPWKPTEPSQMLWVTLTVEARFKKIKACYHSPATAWPFKAYKLSLQFPHFTCP
RTREALQELFRPPPFPTHQARGFAPAQDWQIDFTHMPRVRKLKYLLVWVDAFTGWEADSE
VDFSMYGVTGEGPCDKHLLEGGKGSKSGCRHHCKNEKASDEVGKNIRNAHI

>gi568815592r:136901561_137117106|GENSCAN_predicted_CDS_8|1776_bp
atggattctgctatggagtatgccagagagacagcttcagacatcaatgaggacttgcga
gactcatgtgatcatgagactcacccagagtcttggttaaatgcacagatcagcaggccc
caccccaaactttctgactcagaattacaagatgagcagcccagggtggcaagccgattt
tcatcagacatttatgaggagatcattttctctgaccacttcattcccaaggccagggct
gatgggagcagccccaggaaggtacagtgcttggctaagatctcagagccaccaggtggg
gaagcacaaaagcagaccccagcagtatggcatgagagccagtgctcttccctgcactgc
acaggctggagagaaacaggaggaggaaggaggattccgggtagtcatactgatatgata
ttgagcaacataccatctgcagcaacaacaggggcaaggggaatgggtgcccatgcctcc
tttgacctttccatgagccctgtcttccagctgtcacacacccacagcaataaacagggt
gctccaaaaagagatgccctgcccagagagaaggaatctaaagaggcagtctggctacaa
aggctttgccgagctgtggtgggctctgcccagttcaaacttcctggcagctttgtttac
actgtgaggggaaaaccacatacacaagcctcagtaatggcagacactcctcccccgacc
aagctggagcatcccaggggagtaaatggttctgtctcactggcgttccaggtgccactg
gggtatgagaaaaaattcctgcagctagcttggtgtctgcccaaatggctgcgcagtttt
gtgcttgaaacccagggccctagtggtataggcactaagggaatctcctggtctgcaggt
tgtgaagaccacgggaaaagtgtagtatctaggctagatagcaccatccctcatagcaca
gtttctcatggcttcccttggctaggggaggtagttccccgaccccttgtgcttcccagg
actcagcccacctgcacccaggtgattaaaagctttattgcaccaaacacaaagcctgtt
tggtggtctcttcacacggacgcaagtgaaatttggtgccgtgattcggatcaggggacc
tcccttgggaaatcaatcccctgtcctcctgctctttgttccatgaaaaagatccaccta
cgacctcgggtcctcagacccaccagtccaaggaacatctcaccaattttaaatcggcag
ctgaagactgacactgcccgattgccttggaagcctacagaaccatcacagatgctctgg
gtaacactcacagtggaggcacgctttaaaaagattaaagcctgttatcactcgcctgct
acagcatggccttttaaagcctataaactctccttacaattcccccatttcacctgtcct
agaaccagagaagccttacaggaattgttcaggcctcctccctttcctacacatcaagct
cggggatttgcccctgcccaggactggcaaattgactttactcacatgccccgagtcagg
aaactaaaatacctcttagtctgggtagacgctttcactggatgggaagcagactctgag
gtagactttagtatgtacggtgttactggggagggcccttgtgataaacacctgctggag
ggaggaaaaggaagcaagagtggatgcagacatcattgtaaaaatgaaaaggcaagtgat
gaagtgggcaaaaatattcgcaacgcacatatctga