Result of FASTA (omim) for pF1KE6673
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6673, 309 aa
  1>>>pF1KE6673     309 - 309 aa - 309 aa
Library: /omim/omim.rfq.tfa
  64092750 residues in 91774 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3672+/-0.00031; mu= 16.7994+/- 0.019
 mean_var=84.6775+/-16.968, 0's: 0 Z-trim(116.7): 92  B-trim: 0 in 0/51
 Lambda= 0.139377
 statistics sampled from 29045 (29140) to 29045 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.318), width:  16
 Scan time:  3.420

The best scores are:                                      opt bits E(91774)
NP_004359 (OMIM: 602373) calponin-2 isoform a [Hom ( 309) 2108 433.3 3.1e-121
NP_001830 (OMIM: 602374) calponin-3 isoform 1 [Hom ( 329) 1324 275.7 9.4e-74
NP_001290428 (OMIM: 602373) calponin-2 isoform c [ ( 298) 1258 262.4 8.6e-70
NP_001290430 (OMIM: 602373) calponin-2 isoform d [ ( 330) 1254 261.6 1.6e-69
NP_001290 (OMIM: 600806) calponin-1 isoform 1 [Hom ( 297) 1217 254.2 2.6e-67
XP_016855734 (OMIM: 602374) calponin-3 isoform X1  ( 288) 1129 236.5 5.4e-62
NP_001272985 (OMIM: 602374) calponin-3 isoform 3 [ ( 288) 1129 236.5 5.4e-62
XP_024307130 (OMIM: 600806) calponin-1 isoform X2  ( 299) 1104 231.4 1.8e-60
XP_024307129 (OMIM: 600806) calponin-1 isoform X2  ( 299) 1104 231.4 1.8e-60
XP_016881778 (OMIM: 600806) calponin-1 isoform X1  ( 363) 1104 231.5 2.1e-60
NP_958434 (OMIM: 602373) calponin-2 isoform b [Hom ( 270) 1010 212.5 8.2e-55
NP_001295270 (OMIM: 600806) calponin-1 isoform 2 [ ( 247)  985 207.4 2.5e-53
NP_001295271 (OMIM: 600806) calponin-1 isoform 2 [ ( 247)  985 207.4 2.5e-53
XP_005259798 (OMIM: 600806) calponin-1 isoform X3  ( 247)  985 207.4 2.5e-53
NP_001272984 (OMIM: 602374) calponin-3 isoform 2 [ ( 283)  736 157.4 3.3e-38
NP_001264152 (OMIM: 604634) transgelin-2 isoform b ( 199)  390 87.7 2.2e-17
NP_003555 (OMIM: 604634) transgelin-2 isoform b [H ( 199)  390 87.7 2.2e-17
NP_001264153 (OMIM: 604634) transgelin-2 isoform a ( 220)  390 87.8 2.4e-17
NP_037391 (OMIM: 607953) transgelin-3 [Homo sapien ( 199)  373 84.3 2.4e-16
NP_001008274 (OMIM: 607953) transgelin-3 [Homo sap ( 199)  373 84.3 2.4e-16
NP_001008273 (OMIM: 607953) transgelin-3 [Homo sap ( 199)  373 84.3 2.4e-16
NP_001001522 (OMIM: 600818) transgelin [Homo sapie ( 201)  323 74.3 2.5e-13
NP_003177 (OMIM: 600818) transgelin [Homo sapiens] ( 201)  323 74.3 2.5e-13
NP_001317713 (OMIM: 617750) LIM and calponin homol ( 980)  212 52.5 4.3e-06
NP_001317718 (OMIM: 617750) LIM and calponin homol (1029)  212 52.5 4.5e-06
NP_001317721 (OMIM: 617750) LIM and calponin homol (1044)  212 52.5 4.5e-06
NP_001317717 (OMIM: 617750) LIM and calponin homol (1055)  212 52.5 4.6e-06
NP_001106189 (OMIM: 617750) LIM and calponin homol (1056)  212 52.5 4.6e-06
NP_001106188 (OMIM: 617750) LIM and calponin homol (1057)  212 52.5 4.6e-06
XP_016863389 (OMIM: 617750) LIM and calponin homol (1058)  212 52.5 4.6e-06
NP_001276051 (OMIM: 617750) LIM and calponin homol (1069)  212 52.5 4.6e-06
NP_001317720 (OMIM: 617750) LIM and calponin homol (1070)  212 52.5 4.6e-06
XP_024309705 (OMIM: 617750) LIM and calponin homol (1074)  212 52.5 4.6e-06
NP_001317719 (OMIM: 617750) LIM and calponin homol (1082)  212 52.5 4.7e-06
NP_055803 (OMIM: 617750) LIM and calponin homology (1083)  212 52.5 4.7e-06
NP_001317716 (OMIM: 617750) LIM and calponin homol (1085)  212 52.6 4.7e-06
XP_016863387 (OMIM: 617750) LIM and calponin homol (1086)  212 52.6 4.7e-06
XP_011511956 (OMIM: 617750) LIM and calponin homol (1099)  212 52.6 4.7e-06
XP_011511955 (OMIM: 617750) LIM and calponin homol (1111)  212 52.6 4.7e-06
XP_016863386 (OMIM: 617750) LIM and calponin homol (1573)  212 52.7 6.2e-06
XP_011511950 (OMIM: 617750) LIM and calponin homol (1574)  212 52.7 6.2e-06
XP_016863385 (OMIM: 617750) LIM and calponin homol (1598)  212 52.7 6.2e-06
XP_006714059 (OMIM: 617750) LIM and calponin homol (1600)  212 52.7 6.2e-06
XP_005248118 (OMIM: 617750) LIM and calponin homol (1602)  212 52.7 6.2e-06
XP_011511948 (OMIM: 617750) LIM and calponin homol (1626)  212 52.7 6.3e-06
XP_005248117 (OMIM: 617750) LIM and calponin homol (1626)  212 52.7 6.3e-06
XP_011511947 (OMIM: 617750) LIM and calponin homol (1627)  212 52.7 6.3e-06
XP_016863384 (OMIM: 617750) LIM and calponin homol (1627)  212 52.7 6.3e-06
XP_005248115 (OMIM: 617750) LIM and calponin homol (1629)  212 52.7 6.3e-06
XP_005248114 (OMIM: 617750) LIM and calponin homol (1630)  212 52.7 6.3e-06


>>NP_004359 (OMIM: 602373) calponin-2 isoform a [Homo sa  (309 aa)
 initn: 2108 init1: 2108 opt: 2108  Z-score: 2298.0  bits: 433.3 E(91774): 3.1e-121
Smith-Waterman score: 2108; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
              250       260       270       280       290       300

                
pF1KE6 PYYQEEAGY
       :::::::::
NP_004 PYYQEEAGY
                

>>NP_001830 (OMIM: 602374) calponin-3 isoform 1 [Homo sa  (329 aa)
 initn: 1503 init1: 1201 opt: 1324  Z-score: 1445.7  bits: 275.7 E(91774): 9.4e-74
Smith-Waterman score: 1324; 65.5% identity (81.6% similar) in 310 aa overlap (4-306:2-311)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
          :.:::::::::::::::.. :::: : : .::.::: .::.::::.:: ::::: ::
NP_001   MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIIL
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       : :.:::::::: :.:.:  :: ::::..:::::. .:::.: :.::::::::.::::::
NP_001 CELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQV
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
       :..:.:::: :::::... .::::::.::: : ::.. .:::: ::::::::::::::.:
NP_001 QTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAG
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       :::::::::::::: .   :.:..:::::::::: :::.:: :::::: ::: ::  .  
NP_001 MTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPV
      180       190       200       210       220       230        

              250       260        270         280           290   
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDP
       :::..::::: .. :.:.:. :.:::::.::::::  :   :  .. .:::    .  : 
NP_001 DNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDS
      240       250       260       270       280       290        

           300                        
pF1KE6 GEVPEYPPYYQEEAGY               
           :::  :. :                  
NP_001 DYQAEYPDEYHGEYQDDYPRDYQYSDQGIDY
      300       310       320         

>>NP_001290428 (OMIM: 602373) calponin-2 isoform c [Homo  (298 aa)
 initn: 1254 init1: 1254 opt: 1258  Z-score: 1374.5  bits: 262.4 E(91774): 8.6e-70
Smith-Waterman score: 2015; 96.4% identity (96.4% similar) in 309 aa overlap (1-309:1-298)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
NP_001 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQ-
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----------AKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
               120       130       140       150       160         

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
     170       180       190       200       210       220         

              250       260       270       280       290       300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
     230       240       250       260       270       280         

                
pF1KE6 PYYQEEAGY
       :::::::::
NP_001 PYYQEEAGY
     290        

>>NP_001290430 (OMIM: 602373) calponin-2 isoform d [Homo  (330 aa)
 initn: 1254 init1: 1254 opt: 1254  Z-score: 1369.6  bits: 261.6 E(91774): 1.6e-69
Smith-Waterman score: 2056; 93.6% identity (93.6% similar) in 330 aa overlap (1-309:1-330)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
               70        80        90       100       110       120

              130                            140       150         
pF1KE6 QVSLLALAGK---------------------AKTKGLQSGVDIGVKYSEKQERNFDDATM
       ::::::::::                     :::::::::::::::::::::::::::::
NP_001 QVSLLALAGKGLDLGSLAALCWYSRPLSLTQAKTKGLQSGVDIGVKYSEKQERNFDDATM
              130       140       150       160       170       180

     160       170       180       190       200       210         
pF1KE6 KAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQV
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KE6 GMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTV
              250       260       270       280       290       300

     280       290       300         
pF1KE6 ADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
       ::::::::::::::::::::::::::::::
NP_001 ADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
              310       320       330

>>NP_001290 (OMIM: 600806) calponin-1 isoform 1 [Homo sa  (297 aa)
 initn: 1449 init1: 636 opt: 1217  Z-score: 1330.0  bits: 254.2 E(91774): 2.6e-67
Smith-Waterman score: 1217; 65.8% identity (85.8% similar) in 275 aa overlap (1-274:1-273)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       :::..::.::.:::::::::.: .::: :.: ::: ::::.::  :: .:. ::::: ::
NP_001 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       : ..:::::::: :::.: ::::::::..:::::...::..: :.::::::::. : :::
NP_001 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
       : .:::::. :::::  . :..::::.:::::.:. . .. :. .::::::::: :::.:
NP_001 QSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQG
              130         140       150       160       170        

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       ::::::::::::::     :.:..:::::::::: :::.:::::::.:.:..  :: ..:
NP_001 MTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHC
      180       190       200       210       220       230        

              250       260        270       280       290         
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEY
       :. ..::::: ..::.: :. :.:: ::.::::::                         
NP_001 DTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA 
      240       250       260       270       280       290        

     300         
pF1KE6 PPYYQEEAGY

>>XP_016855734 (OMIM: 602374) calponin-3 isoform X1 [Hom  (288 aa)
 initn: 1311 init1: 1009 opt: 1129  Z-score: 1234.6  bits: 236.5 E(91774): 5.4e-62
Smith-Waterman score: 1129; 64.4% identity (80.7% similar) in 270 aa overlap (44-306:1-270)

            20        30        40        50        60        70   
pF1KE6 LSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVP
                                     .::::.:: ::::: ::: :.:::::::: 
XP_016                               MSIGPNFQLGLKDGIILCELINKLQPGSVK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE6 KINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKT
       :.:.:  :: ::::..:::::. .:::.: :.::::::::.:::::::..:.:::: :::
XP_016 KVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKT
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KE6 KGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDP
       ::... .::::::.::: : ::.. .:::: ::::::::::::::.::::::::::::::
XP_016 KGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDP
              100       110       120       130       140       150

           200       210       220       230       240       250   
pF1KE6 KNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQ
       : .   :.:..:::::::::: :::.:: :::::: ::: ::  .  :::..::::: ..
XP_016 KMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNK
              160       170       180       190       200       210

           260        270         280           290       300      
pF1KE6 GANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDPGEVPEYPPYYQEE
        :.:.:. :.:::::.::::::  :   :  .. .:::    .  :     :::  :. :
XP_016 VASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGE
              220       230       240       250       260       270

                         
pF1KE6 AGY               
                         
XP_016 YQDDYPRDYQYSDQGIDY
              280        

>>NP_001272985 (OMIM: 602374) calponin-3 isoform 3 [Homo  (288 aa)
 initn: 1311 init1: 1009 opt: 1129  Z-score: 1234.6  bits: 236.5 E(91774): 5.4e-62
Smith-Waterman score: 1129; 64.4% identity (80.7% similar) in 270 aa overlap (44-306:1-270)

            20        30        40        50        60        70   
pF1KE6 LSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVP
                                     .::::.:: ::::: ::: :.:::::::: 
NP_001                               MSIGPNFQLGLKDGIILCELINKLQPGSVK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE6 KINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKT
       :.:.:  :: ::::..:::::. .:::.: :.::::::::.:::::::..:.:::: :::
NP_001 KVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKT
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KE6 KGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDP
       ::... .::::::.::: : ::.. .:::: ::::::::::::::.::::::::::::::
NP_001 KGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDP
              100       110       120       130       140       150

           200       210       220       230       240       250   
pF1KE6 KNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQ
       : .   :.:..:::::::::: :::.:: :::::: ::: ::  .  :::..::::: ..
NP_001 KMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNK
              160       170       180       190       200       210

           260        270         280           290       300      
pF1KE6 GANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDPGEVPEYPPYYQEE
        :.:.:. :.:::::.::::::  :   :  .. .:::    .  :     :::  :. :
NP_001 VASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGE
              220       230       240       250       260       270

                         
pF1KE6 AGY               
                         
NP_001 YQDDYPRDYQYSDQGIDY
              280        

>>XP_024307130 (OMIM: 600806) calponin-1 isoform X2 [Hom  (299 aa)
 initn: 1333 init1: 529 opt: 1104  Z-score: 1207.2  bits: 231.4 E(91774): 1.8e-60
Smith-Waterman score: 1104; 65.0% identity (84.6% similar) in 254 aa overlap (22-274:24-275)

                 10        20        30        40        50        
pF1KE6   MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGT
                              : .::: :.: ::: ::::.::  :: .:. ::::: 
XP_024 MTSTPLQASTQGHLLRHPSSLPELAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGI
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KE6 ILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMT
       ::: ..:::::::: :::.: ::::::::..:::::...::..: :.::::::::. : :
XP_024 ILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHT
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KE6 QVQVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQ
       ::: .:::::. :::::  . :..::::.:::::.:. . .. :. .::::::::: :::
XP_024 QVQSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQ
              130         140       150       160       170        

      180       190       200       210       220       230        
pF1KE6 SGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTD
       .:::::::::::::::     :.:..:::::::::: :::.:::::::.:.:..  :: .
XP_024 QGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGME
      180       190       200       210       220       230        

      240       250       260        270       280       290       
pF1KE6 KCDNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVP
       .::. ..::::: ..::.: :. :.:: ::.::::::                       
XP_024 HCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNS
      240       250       260       270       280       290        

       300         
pF1KE6 EYPPYYQEEAGY
                   
XP_024 A           
                   

>>XP_024307129 (OMIM: 600806) calponin-1 isoform X2 [Hom  (299 aa)
 initn: 1333 init1: 529 opt: 1104  Z-score: 1207.2  bits: 231.4 E(91774): 1.8e-60
Smith-Waterman score: 1104; 65.0% identity (84.6% similar) in 254 aa overlap (22-274:24-275)

                 10        20        30        40        50        
pF1KE6   MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGT
                              : .::: :.: ::: ::::.::  :: .:. ::::: 
XP_024 MTSTPLQASTQGHLLRHPSSLPELAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGI
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KE6 ILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMT
       ::: ..:::::::: :::.: ::::::::..:::::...::..: :.::::::::. : :
XP_024 ILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHT
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KE6 QVQVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQ
       ::: .:::::. :::::  . :..::::.:::::.:. . .. :. .::::::::: :::
XP_024 QVQSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQ
              130         140       150       160       170        

      180       190       200       210       220       230        
pF1KE6 SGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTD
       .:::::::::::::::     :.:..:::::::::: :::.:::::::.:.:..  :: .
XP_024 QGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGME
      180       190       200       210       220       230        

      240       250       260        270       280       290       
pF1KE6 KCDNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVP
       .::. ..::::: ..::.: :. :.:: ::.::::::                       
XP_024 HCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNS
      240       250       260       270       280       290        

       300         
pF1KE6 EYPPYYQEEAGY
                   
XP_024 A           
                   

>>XP_016881778 (OMIM: 600806) calponin-1 isoform X1 [Hom  (363 aa)
 initn: 1333 init1: 529 opt: 1104  Z-score: 1206.0  bits: 231.5 E(91774): 2.1e-60
Smith-Waterman score: 1104; 65.0% identity (84.6% similar) in 254 aa overlap (22-274:88-339)

                        10        20        30        40        50 
pF1KE6          MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQ
                                     : .::: :.: ::: ::::.::  :: .:.
XP_016 DTERQRCMTSTPLQASTQGHLLRHPSSLPELAQKYDHQREQELREWIEGVTGRRIGNNFM
        60        70        80        90       100       110       

              60        70        80        90       100       110 
pF1KE6 KGLKDGTILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDL
        ::::: ::: ..:::::::: :::.: ::::::::..:::::...::..: :.::::::
XP_016 DGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDL
       120       130       140       150       160       170       

             120       130       140       150       160       170 
pF1KE6 FESGNMTQVQVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMG
       ::. : :::: .:::::. :::::  . :..::::.:::::.:. . .. :. .::::::
XP_016 FENTNHTQVQSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMG
       180       190       200         210       220       230     

             180       190       200       210       220       230 
pF1KE6 TNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIY
       ::: :::.:::::::::::::::     :.:..:::::::::: :::.:::::::.:.:.
XP_016 TNKFASQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIF
         240       250       260       270       280       290     

             240       250       260        270       280       290
pF1KE6 DTKLGTDKCDNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDC
       .  :: ..::. ..::::: ..::.: :. :.:: ::.::::::                
XP_016 EPGLGMEHCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHH
         300       310       320       330       340       350     

              300         
pF1KE6 PDPGEVPEYPPYYQEEAGY
                          
XP_016 AHNYYNSA           
         360              




309 residues in 1 query   sequences
64092750 residues in 91774 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Jul 16 16:09:19 2019 done: Tue Jul 16 16:09:19 2019
 Total Scan time:  3.420 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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