Result of FASTA (ccds) for pF1KE6673
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6673, 309 aa
  1>>>pF1KE6673     309 - 309 aa - 309 aa
Library: human.CCDS.faa
  18921897 residues in 33420 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8086+/-0.000779; mu= 14.0777+/- 0.047
 mean_var=81.8015+/-16.095, 0's: 0 Z-trim(108.9): 42  B-trim: 0 in 0/52
 Lambda= 0.141806
 statistics sampled from 10611 (10650) to 10611 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.319), width:  16
 Scan time:  1.140

The best scores are:                                      opt bits E(33420)
CCDS12053.1 CNN2 gene_id:1265|Hs109|chr19          ( 309) 2108 440.6 7.5e-124
CCDS30775.1 CNN3 gene_id:1266|Hs109|chr1           ( 329) 1324 280.2 1.5e-75
CCDS77204.1 CNN2 gene_id:1265|Hs109|chr19          ( 298) 1258 266.7 1.6e-71
CCDS77205.1 CNN2 gene_id:1265|Hs109|chr19          ( 330) 1254 265.9 3.1e-71
CCDS12263.1 CNN1 gene_id:1264|Hs109|chr19          ( 297) 1217 258.3 5.4e-69
CCDS65592.1 CNN3 gene_id:1266|Hs109|chr1           ( 288) 1129 240.3 1.4e-63
CCDS12054.1 CNN2 gene_id:1265|Hs109|chr19          ( 270) 1010 215.9 2.8e-56
CCDS77238.1 CNN1 gene_id:1264|Hs109|chr19          ( 247)  985 210.8   9e-55
CCDS65593.1 CNN3 gene_id:1266|Hs109|chr1           ( 283)  736 159.9 2.2e-39
CCDS1189.1 TAGLN2 gene_id:8407|Hs109|chr1          ( 199)  390 89.0 3.3e-18
CCDS60314.1 TAGLN2 gene_id:8407|Hs109|chr1         ( 220)  390 89.0 3.6e-18
CCDS33816.1 TAGLN3 gene_id:29114|Hs109|chr3        ( 199)  373 85.5 3.7e-17
CCDS8381.1 TAGLN gene_id:6876|Hs109|chr11          ( 201)  323 75.3 4.5e-14


>>CCDS12053.1 CNN2 gene_id:1265|Hs109|chr19               (309 aa)
 initn: 2108 init1: 2108 opt: 2108  Z-score: 2337.2  bits: 440.6 E(33420): 7.5e-124
Smith-Waterman score: 2108; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
              250       260       270       280       290       300

                
pF1KE6 PYYQEEAGY
       :::::::::
CCDS12 PYYQEEAGY
                

>>CCDS30775.1 CNN3 gene_id:1266|Hs109|chr1                (329 aa)
 initn: 1503 init1: 1201 opt: 1324  Z-score: 1470.0  bits: 280.2 E(33420): 1.5e-75
Smith-Waterman score: 1324; 65.5% identity (81.6% similar) in 310 aa overlap (4-306:2-311)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
          :.:::::::::::::::.. :::: : : .::.::: .::.::::.:: ::::: ::
CCDS30   MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIIL
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       : :.:::::::: :.:.:  :: ::::..:::::. .:::.: :.::::::::.::::::
CCDS30 CELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQV
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
       :..:.:::: :::::... .::::::.::: : ::.. .:::: ::::::::::::::.:
CCDS30 QTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAG
      120       130       140       150       160       170        

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       :::::::::::::: .   :.:..:::::::::: :::.:: :::::: ::: ::  .  
CCDS30 MTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPV
      180       190       200       210       220       230        

              250       260        270         280           290   
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDP
       :::..::::: .. :.:.:. :.:::::.::::::  :   :  .. .:::    .  : 
CCDS30 DNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDS
      240       250       260       270       280       290        

           300                        
pF1KE6 GEVPEYPPYYQEEAGY               
           :::  :. :                  
CCDS30 DYQAEYPDEYHGEYQDDYPRDYQYSDQGIDY
      300       310       320         

>>CCDS77204.1 CNN2 gene_id:1265|Hs109|chr19               (298 aa)
 initn: 1254 init1: 1254 opt: 1258  Z-score: 1397.7  bits: 266.7 E(33420): 1.6e-71
Smith-Waterman score: 2015; 96.4% identity (96.4% similar) in 309 aa overlap (1-309:1-298)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
CCDS77 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQ-
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ----------AKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
               120       130       140       150       160         

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
     170       180       190       200       210       220         

              250       260       270       280       290       300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
     230       240       250       260       270       280         

                
pF1KE6 PYYQEEAGY
       :::::::::
CCDS77 PYYQEEAGY
     290        

>>CCDS77205.1 CNN2 gene_id:1265|Hs109|chr19               (330 aa)
 initn: 1254 init1: 1254 opt: 1254  Z-score: 1392.6  bits: 265.9 E(33420): 3.1e-71
Smith-Waterman score: 2056; 93.6% identity (93.6% similar) in 330 aa overlap (1-309:1-330)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
               70        80        90       100       110       120

              130                            140       150         
pF1KE6 QVSLLALAGK---------------------AKTKGLQSGVDIGVKYSEKQERNFDDATM
       ::::::::::                     :::::::::::::::::::::::::::::
CCDS77 QVSLLALAGKGLDLGSLAALCWYSRPLSLTQAKTKGLQSGVDIGVKYSEKQERNFDDATM
              130       140       150       160       170       180

     160       170       180       190       200       210         
pF1KE6 KAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 KAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQV
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KE6 GMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTV
              250       260       270       280       290       300

     280       290       300         
pF1KE6 ADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
       ::::::::::::::::::::::::::::::
CCDS77 ADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
              310       320       330

>>CCDS12263.1 CNN1 gene_id:1264|Hs109|chr19               (297 aa)
 initn: 1449 init1: 636 opt: 1217  Z-score: 1352.4  bits: 258.3 E(33420): 5.4e-69
Smith-Waterman score: 1217; 65.8% identity (85.8% similar) in 275 aa overlap (1-274:1-273)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       :::..::.::.:::::::::.: .::: :.: ::: ::::.::  :: .:. ::::: ::
CCDS12 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       : ..:::::::: :::.: ::::::::..:::::...::..: :.::::::::. : :::
CCDS12 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
       : .:::::. :::::  . :..::::.:::::.:. . .. :. .::::::::: :::.:
CCDS12 QSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQG
              130         140       150       160       170        

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       ::::::::::::::     :.:..:::::::::: :::.:::::::.:.:..  :: ..:
CCDS12 MTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHC
      180       190       200       210       220       230        

              250       260        270       280       290         
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEY
       :. ..::::: ..::.: :. :.:: ::.::::::                         
CCDS12 DTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA 
      240       250       260       270       280       290        

     300         
pF1KE6 PPYYQEEAGY

>>CCDS65592.1 CNN3 gene_id:1266|Hs109|chr1                (288 aa)
 initn: 1311 init1: 1009 opt: 1129  Z-score: 1255.3  bits: 240.3 E(33420): 1.4e-63
Smith-Waterman score: 1129; 64.4% identity (80.7% similar) in 270 aa overlap (44-306:1-270)

            20        30        40        50        60        70   
pF1KE6 LSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVP
                                     .::::.:: ::::: ::: :.:::::::: 
CCDS65                               MSIGPNFQLGLKDGIILCELINKLQPGSVK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE6 KINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKT
       :.:.:  :: ::::..:::::. .:::.: :.::::::::.:::::::..:.:::: :::
CCDS65 KVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKT
               40        50        60        70        80        90

           140       150       160       170       180       190   
pF1KE6 KGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDP
       ::... .::::::.::: : ::.. .:::: ::::::::::::::.::::::::::::::
CCDS65 KGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDP
              100       110       120       130       140       150

           200       210       220       230       240       250   
pF1KE6 KNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQ
       : .   :.:..:::::::::: :::.:: :::::: ::: ::  .  :::..::::: ..
CCDS65 KMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNK
              160       170       180       190       200       210

           260        270         280           290       300      
pF1KE6 GANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDPGEVPEYPPYYQEE
        :.:.:. :.:::::.::::::  :   :  .. .:::    .  :     :::  :. :
CCDS65 VASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGE
              220       230       240       250       260       270

                         
pF1KE6 AGY               
                         
CCDS65 YQDDYPRDYQYSDQGIDY
              280        

>>CCDS12054.1 CNN2 gene_id:1265|Hs109|chr19               (270 aa)
 initn: 1000 init1: 1000 opt: 1010  Z-score: 1124.1  bits: 215.9 E(33420): 2.8e-56
Smith-Waterman score: 1766; 87.4% identity (87.4% similar) in 309 aa overlap (1-309:1-270)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
       ::::::::::                                       :::::::::::
CCDS12 QVSLLALAGK---------------------------------------MGTNKCASQSG
              130                                              140 

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
             150       160       170       180       190       200 

              250       260       270       280       290       300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
             210       220       230       240       250       260 

                
pF1KE6 PYYQEEAGY
       :::::::::
CCDS12 PYYQEEAGY
             270

>>CCDS77238.1 CNN1 gene_id:1264|Hs109|chr19               (247 aa)
 initn: 1217 init1: 529 opt: 985  Z-score: 1097.0  bits: 210.8 E(33420): 9e-55
Smith-Waterman score: 985; 65.9% identity (86.1% similar) in 223 aa overlap (53-274:3-223)

             30        40        50        60        70        80  
pF1KE6 LSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNW
                                     ::::: ::: ..:::::::: :::.: :::
CCDS77                             MDGLKDGIILCEFINKLQPGSVKKINESTQNW
                                           10        20        30  

             90       100       110       120       130       140  
pF1KE6 HQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGLQSGVDI
       :::::..:::::...::..: :.::::::::. : :::: .:::::. :::::  . :..
CCDS77 HQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKG--NKVNV
             40        50        60        70        80          90

            150       160       170       180       190       200  
pF1KE6 GVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMD
       ::::.:::::.:. . .. :. .::::::::: :::.:::::::::::::::     :.:
CCDS77 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
              100       110       120       130       140       150

            210       220       230       240       250       260  
pF1KE6 HSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQ-V
       ..:::::::::: :::.:::::::.:.:..  :: ..::. ..::::: ..::.: :. :
CCDS77 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
              160       170       180       190       200       210

             270       280       290       300         
pF1KE6 FGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
       .:: ::.::::::                                   
CCDS77 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA           
              220       230       240                  

>>CCDS65593.1 CNN3 gene_id:1266|Hs109|chr1                (283 aa)
 initn: 1271 init1: 589 opt: 736  Z-score: 820.9  bits: 159.9 E(33420): 2.2e-39
Smith-Waterman score: 1004; 54.8% identity (67.7% similar) in 310 aa overlap (4-306:2-265)

               10        20        30        40        50        60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
          :.:::::::::::::::.. :::: : : .::.::: .::.::::.:: ::::: ::
CCDS65   MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIIL
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
       : :.:::::::: :.:.:  :: :                                    
CCDS65 CELINKLQPGSVKKVNESSLNWPQ------------------------------------
       60        70        80                                      

              130       140       150       160       170       180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
                 :::::... .::::::.::: : ::.. .:::: ::::::::::::::.:
CCDS65 ----------AKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAG
                       90       100       110       120       130  

              190       200       210       220       230       240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
       :::::::::::::: .   :.:..:::::::::: :::.:: :::::: ::: ::  .  
CCDS65 MTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPV
            140       150       160       170       180       190  

              250       260        270         280           290   
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDP
       :::..::::: .. :.:.:. :.:::::.::::::  :   :  .. .:::    .  : 
CCDS65 DNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDS
            200       210       220       230       240       250  

           300                        
pF1KE6 GEVPEYPPYYQEEAGY               
           :::  :. :                  
CCDS65 DYQAEYPDEYHGEYQDDYPRDYQYSDQGIDY
            260       270       280   

>>CCDS1189.1 TAGLN2 gene_id:8407|Hs109|chr1               (199 aa)
 initn: 461 init1: 157 opt: 390  Z-score: 440.6  bits: 89.0 E(33420): 3.3e-18
Smith-Waterman score: 471; 43.4% identity (69.9% similar) in 196 aa overlap (7-190:3-198)

               10        20        30        40              50    
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIG-P-----DFQKGL
             :.::.:::: ::.... ..:: . :  :  ::      ..: :     .::. :
CCDS11     MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWL
                   10        20        30        40        50      

           60         70          80        90       100       110 
pF1KE6 KDGTILCTLMNKLQP-GSVP--KINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDL
       ::::.:: :.: : : :..:  ::. : . ..:.:..:.:..:   ::.: .:.:.. ::
CCDS11 KDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDL
         60        70        80        90       100       110      

             120       130          140       150       160        
pF1KE6 FESGNMTQVQVSLLALAGKA--KTKGLQSG-VDIGVKYSEKQERNFDDATMKAGQCVIGL
       .:. ::. :: .:. :.: :  .  :: ::  .   : :... :::.:  .. :. ::::
CCDS11 WEGKNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGL
        120       130       140       150       160       170      

      170       180       190       200       210       220        
pF1KE6 QMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRR
       :::::. :::.:::.::  :..                                      
CCDS11 QMGTNRGASQAGMTGYGMPRQIL                                     
        180       190                                              




309 residues in 1 query   sequences
18921897 residues in 33420 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Jul 16 16:09:18 2019 done: Tue Jul 16 16:09:18 2019
 Total Scan time:  1.140 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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